Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02-
23] 745 sequences; 39,901,278 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq334 159 3e-34
seq698 95.1 1e-14
>seq334
Length=652976
Score = 159 bits (176), Expect = 3e-34
Identities = 353/524 (67%), Gaps = 19/524 (4%)
Strand=Plus/Minus
Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410
|| ||| ||||||||||| ||||| || ||||| || ||||| | | || ||||| |
Sbjct 129213 CTGGTAGTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTC 129154
Query 120411 CATAAACTCGAACGGGTTGCT--CGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGC 120468
||| || ||||| ||||| | |||| || | | ||| | || | || |
Sbjct 129153 CATGAAGTCGAAGGGGTTTGTGGCGCGGTACACCTTCTCG--TTACCGAGGGCGACCAAT 129096
Query 120469 AGTCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAAC 120528
|| ||||| || || ||||| ||||||| |||| | ||||||||||| || |
Sbjct 129095 AGACGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTTGGCGTTCATGCCGAGTAGG 129036
Query 120529 GCCACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACAT- 120587
|| |||| ||| ||| || || |||| ||| ||| | || || || ||| ||
Sbjct 129035 GCGCAGGGCAGTGCCTCCGTCAAGAATTCCTGCTCGATGGCGACGGCATCTGTGATGATC 128976
Query 120588 -----GGCGAGCATAGTGTGGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGG 120642
| ||| ||| | |||||| |||| | | |||| | | |||| |
Sbjct 128975 TTCTGGACGA-CATCCTT--GCCGGGGCGGTTGT-TGAGGTGCGAGAACAGTAG-----G 128925
Query 120643 CACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGG 120702
|| || ||||| ||||| || |||||||| ||||| || |||||||| || ||||||
Sbjct 128924 CAGGCGAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTAGAGAAGGTCAGG 128865
Query 120703 CCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAAC 120762
|||||||||| || | |||||| |||| |||| ||| ||| || |||||
Sbjct 128864 CCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCGCTGAAGAAG 128805
Query 120763 ACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCG 120822
| |||||| ||| ||||||||||| || |||| ||| || || | | ||||| ||
Sbjct 128804 ATGCCCTCGACGGCGGCAAAGGCGATCAAACGCTGGGCGAAGGTGGACTTCTTGTCAGCG 128745
Query 120823 ATCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCAT 120866
||||| | || |||||| || ||||| |||| | ||| || ||
Sbjct 128744 ATCCAGTGCAGGGCCCAGTCCGCCTTCCTGCGGATGCAAGGGAT 128701
>seq698
Length=460427
Score = 95.1 bits (104), Expect = 1e-14
Identities = 134/186 (72%), Gaps = 2/186 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
||||| || ||||| || ||||| ||| | || | | | ||||| |||||||||||
Sbjct 203546 GTGGATTCCTTCTGGATGTTGTAGTCGGATAGGGTTCGGCCA-TCCTCAAGCTGCTTGCC 203488
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | || | ||||||||||| ||||| ||||| |||||||| ||||| |||
Sbjct 203487 GGCGAAGATCAATCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTCGACTT 203428
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | || | ||||||| | ||| || || | ||||| ||| || ||||| || ||
Sbjct 203427 GACATTGTCGATGGTGTCGGACGACTCGACCTCCAAGGTGATGGTCTTTCCGGTAAGGGT 203368
Query 133643 TTTTAC 133648
|||||
Sbjct 203367 CTTTAC 203362
Score = 93.3 bits (102), Expect = 4e-14
Identities = 141/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| ||||| ||||| || ||||| |||| || ||| ||| |||||| |||||||| ||
Sbjct 204002 GTAGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGACC-GTCCTCCAGCTGCTTTCC 203944
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | ||||| || || || || ||||| |||||||||||||| ||||| |||
Sbjct 203943 AGCGAAGATGAGACGTTGTTGATCAGGAGGAATGCCTTCCTTGTCCTGAATCTTGCTCTT 203884
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | || | ||||||| | || || |||| ||| | || || || |||| ||
Sbjct 203883 CACGTTGTCGATGGTGTCGGAAGATTCAACTTCGAGGGTAATTGTCTTCCCCGTCAATGT 203824
Query 133643 TTTTACGAAAATCTGCAT 133660
|| || || || |||||
Sbjct 203823 CTTGACAAAGATTTGCAT 203806
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483416298143800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |