Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq434 134 3e-26 >seq434 Length=564148 Score = 134 bits (148), Expect = 3e-26 Identities = 226/321 (70%), Gaps = 7/321 (2%) Strand=Plus/Plus Query 110686 TTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAA-- 110743 |||| || ||| | | |||||||| ||||||| | ||| || | || ||||| || Sbjct 552047 TTGTACCCATGCTCCGTGTCTTCAATAACACTGCTAGATACGTAGACCAGGGTGGCAACA 552106 Query 110744 -GAGAAATGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCT 110802 |||| ||| | ||||| ||||||||||| |||||||| || ||| | || || ||| Sbjct 552107 AGAGACCTGGTGCTTTTGCCATCTATCTCGAGCCTTGGCACTCGGATGTTTTCGAGTTCC 552166 Query 110803 TAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAA 110862 | || ||||| || || || || |||||| | || |||||| | || || Sbjct 552167 TGGACCTTCGAAAGAACCACGGCAAGGAAGAAGTCCGTGCCCGTGATCTTTTCCTGGCTC 552226 Query 110863 TGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGAA-AATGGCATGTGGTCTCTTATG 110921 | |||||| | || | |||||||| |||| || |||| |||||| |||| | || ||| Sbjct 552227 TTTGGATTCCCGACCTCTTCATGAAGCGTG-TCGAGAAGAATGGCGAGTGGACCCTCATG 552285 Query 110922 TGTCCTCATCG-TTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTA 110980 || || || || | ||||| ||| | ||||| ||||| | |||||||| | ||| || Sbjct 552286 TG-CCCCAACGAATGCCCTGGCCTAGCCGATGTCTATGGCGACGAGTTTGAGGCCCTGTA 552344 Query 110981 CGAAAAATATGAAAAAGAAGG 111001 ||| || || ||| ||| || Sbjct 552345 CGAGAAGTACGAAGCAGAGGG 552365 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186801471500945