Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02-
23] 745 sequences; 39,901,278 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq434 134 3e-26
>seq434
Length=564148
Score = 134 bits (148), Expect = 3e-26
Identities = 226/321 (70%), Gaps = 7/321 (2%)
Strand=Plus/Plus
Query 110686 TTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAA-- 110743
|||| || ||| | | |||||||| ||||||| | ||| || | || ||||| ||
Sbjct 552047 TTGTACCCATGCTCCGTGTCTTCAATAACACTGCTAGATACGTAGACCAGGGTGGCAACA 552106
Query 110744 -GAGAAATGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCT 110802
|||| ||| | ||||| ||||||||||| |||||||| || ||| | || || |||
Sbjct 552107 AGAGACCTGGTGCTTTTGCCATCTATCTCGAGCCTTGGCACTCGGATGTTTTCGAGTTCC 552166
Query 110803 TAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAA 110862
| || ||||| || || || || |||||| | || |||||| | || ||
Sbjct 552167 TGGACCTTCGAAAGAACCACGGCAAGGAAGAAGTCCGTGCCCGTGATCTTTTCCTGGCTC 552226
Query 110863 TGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGAA-AATGGCATGTGGTCTCTTATG 110921
| |||||| | || | |||||||| |||| || |||| |||||| |||| | || |||
Sbjct 552227 TTTGGATTCCCGACCTCTTCATGAAGCGTG-TCGAGAAGAATGGCGAGTGGACCCTCATG 552285
Query 110922 TGTCCTCATCG-TTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTA 110980
|| || || || | ||||| ||| | ||||| ||||| | |||||||| | ||| ||
Sbjct 552286 TG-CCCCAACGAATGCCCTGGCCTAGCCGATGTCTATGGCGACGAGTTTGAGGCCCTGTA 552344
Query 110981 CGAAAAATATGAAAAAGAAGG 111001
||| || || ||| ||| ||
Sbjct 552345 CGAGAAGTACGAAGCAGAGGG 552365
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186801471500945
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |