Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq698 107 1e-18 seq27 105 4e-18 >seq698 Length=460427 Score = 107 bits (118), Expect = 1e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | || ||| | || | || ||||||||||| || || |||||||| ||||| Sbjct 203287 CCACCACGCAGACGGAGGACAAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAA 203228 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| |||| || | ||| |||||||| |||||||| ||||| || || | || Sbjct 203227 AGAGTGCGACCGTCTTCAAGTTGCTTTCCGGCGAAAATCAATCGCTGTTGGTCAGGGGGG 203168 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | || || ||||| || ||| | | ||| | ||| | ||| || ||||| || Sbjct 203167 ATGCCCTCCTTGTCCTGGATCTTC-GACTTAACGTTGTCGATGGTATCCGAGGATTCGAC 203109 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| ||||| || || || || | || || || ||||||||||| Sbjct 203108 CTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 203061 >seq27 Length=240170 Score = 105 bits (116), Expect = 4e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 ||||||| | | || | ||| | || || |||||||| || || |||||||| |||| Sbjct 62163 CACCACCACGGAGGCGGAGCACGAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGG 62222 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 |||| ||||| |||| || | ||| || ||||| || |||| ||||| || || | | Sbjct 62223 AGAGAGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATCAGTCGCTGTTGGTCGGGGG 62282 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | | || || ||||| || || || | ||| ||| | ||||||||| || ||| Sbjct 62283 GGATTCCCTCCTTGTCCTGGATCTTGGACTTGA-CATTGTCGATGGTGTCGCTCGACTCC 62341 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || |||| ||||| || || || || | || || || ||||||||||| Sbjct 62342 ACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 62391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328701015470400