Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq698 111 4e-19 >seq698 Length=460427 Score = 111 bits (122), Expect = 4e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || ||||| || || || ||||| | || ||||| ||| ||||| |||| Sbjct 203593 AAGACTCTCACTGGCAAGACAATCACCCTTGAGGTGGAGTCTTCGGACACGATCGACAAC 203652 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || || ||||| || || || || ||||| ||| ||| ||| |||||||||| Sbjct 203653 GTCAAATCCAAGATCCAGGACAAGGAGGGAATCCCGCCCGACCAACAACGACTTATCTTT 203712 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| ||||||||||| ||||| | || || ||| |||||| | ||||| ||||| Sbjct 203713 GCCGGTAAGCAGTTGGAGGATGGCCGAACGCTGAGCGACTACAACATTCAGAAGGAGTCG 203772 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 || || ||||||||| | ||||||| Sbjct 203773 ACCCTGCACCTTGTTCTCCGACTTCG 203798 Score = 95.1 bits (104), Expect = 3e-14 Identities = 141/199 (71%), Gaps = 1/199 (1%) Strand=Plus/Plus Query 206181 TTGCAAA-ACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCG 206239 ||| ||| || || || ||||| || ||||| ||||| || || || ||||| ||| Sbjct 203360 TTGTAAAGACCCTTACCGGAAAGACCATCACCTTGGAGGTCGAGTCGTCCGACACCATCG 203419 Query 206240 AATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTA 206299 | || ||| |||||||| || || || || ||| || ||| || || | | Sbjct 203420 ACAATGTCAAGTCGAAGATTCAGGACAAGGAGGGCATTCCTCCTGACCAGCAGCGATTGA 203479 Query 206300 TCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAG 206359 |||||||||| |||||| | || ||||| | || | |||| |||||| ||||||| | Sbjct 203480 TCTTCGCCGGCAAGCAGCTTGAGGATGGCCGAACCCTATCCGACTACAACATCCAGAAGG 203539 Query 206360 AGTCTACTCTTCACCTTGT 206378 | || ||||||||||| || Sbjct 203540 AATCCACTCTTCACCTCGT 203558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181809519151145