Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq334 212 9e-49 >seq334 Length=652976 Score = 212 bits (234), Expect = 9e-49 Identities = 362/513 (71%), Gaps = 24/513 (5%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| | |||||| || ||| ||| || ||||| |||||||| |||||| | || | Sbjct 128367 GATCTGGCAGATGTAC-AAGAAGCACGAAGCTTCCTTCTGGACCGCTGAGGAGATTGATC 128425 Query 1455835 TCGGCGCCGA----CACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTC 1455887 || | || |||| ||||| ||| | | ||| || ||| ||| Sbjct 128426 TCTCCAAGGATCTCCACG----ACTGGAGCAACCGCCTAAACGATGATGAGAAGTTCTTC 128481 Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947 ||| ||| |||| ||||||| ||||||| ||| ||||| || ||||||||| | Sbjct 128482 ATCTCCCACATCCTTGCCTTTT-TCGCCGCATCCGACGGCATTGTCAACGAGAACCTTGT 128540 Query 1455948 CGGCCGCTT-TATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGA 1456006 || || || | || |||||||| | || ||||| || | || ||||| ||||||| Sbjct 128541 CGAGCGATTCTCTG-GCGAGGTCCAGATTCCCGAGGCGCGATGCTTCTACGGTTTCCAGA 128599 Query 1456007 TCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGG 1456066 || || || ||||||||||| || |||||||| ||||| || ||||| ||| |||||| Sbjct 128600 TCATGATGGAGAACATCCACTCCGAGACCTACTCTCTCCTCATTGACACATACATCAAGG 128659 Query 1456067 ACCCGGTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAA 1456126 | || | | ||||| ||| ||||| |||||||||||| | || | | | | | Sbjct 128660 AGCCCGCCCAGAAGACCCATCTCTTCAACGCCATCGACACCATCCCTTGCATCCGCAGGA 128719 Query 1456127 AGGCCGACTGGGCGATGAAGTGGATC---AACAAGGAGGGCCTCGACACTTTGCCGAGCG 1456183 |||| |||||||| || | |||||| ||||| || || || ||| ||| |||| Sbjct 128720 AGGCGGACTGGGCCCTGCACTGGATCGCTGACAAGAAG----TCCAC-CTTCGCCCAGCG 128774 Query 1456184 GCTCGTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTT 1456242 | ||| |||||||| ||||||||||||||| ||| || ||| | ||||||| Sbjct 128775 TTTGATCGCCTTTGCCGCCGTCGAGGGCATCTTCTTCAGCGGTGCCTTCGCCTCCATCTT 128834 Query 1456243 TTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 |||||||||||||| || ||||||||||| || Sbjct 128835 CTGGCTCAAGAAGCGTGGTCTCATGCCCGGCCT 128867 Score = 120 bits (132), Expect = 4e-21 Identities = 188/264 (71%), Gaps = 4/264 (2%) Strand=Plus/Plus Query 1456518 AGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGG 1456577 || |||||||| || ||||||| |||||| | || || | | ||| | ||||| Sbjct 128972 AGAAGATCATCACAGATGCCGTCGCCATCGAGCAGGAATTCTTGACGGAGGCACTGCCCT 129031 Query 1456578 TGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGA 1456637 || || ||||||||||||||| | |||||| |||||||| || || |||||||| Sbjct 129032 GCGCCCTACTCGGCATGAACGCCAAC-CTCATGAAGCAGTACATCGAGTTC-GTCGCCGA 129089 Query 1456638 CCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCAT 1456697 ||| || | | || ||||| || ||||| ||||| | | ||||| ||| | Sbjct 129090 CCGTCTATTGGTCGCCCTCGGTAACG-AGAAGGTGTACCGCGCCACAAACCCCTTCGACT 129148 Query 1456698 GGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGT 1456756 |||||| ||||| |||| |||||||||||||| |||||| ||||| ||||| | Sbjct 129149 TCATGGAGAACATCTCCCTCGGTGGCAAGACCAACTTCTTCGAGAAGCGCGTCGGCGACT 129208 Query 1456757 ACGCCAAGGCCGGCGTCACCGCCA 1456780 || |||||||| |||| |||| Sbjct 129209 ACCAGAAGGCCGGTGTCATGGCCA 129232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177739343380690