Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02-
23] 745 sequences; 39,901,278 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq27 107 2e-18
seq698 105 6e-18
>seq27
Length=240170
Score = 107 bits (118), Expect = 2e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 35540 GTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCC 35599
|| |||||||| || |||||||| |||| | || || |||| || || ||||| ||
Sbjct 62195 GTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCGTCCTCGAGTTGCTTGCCG 62254
Query 35600 GCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTC 35659
|| || |||| ||||| ||||| | || | | |||||||||| |||||| |||
Sbjct 62255 GCGAAGATCAGTCGCTGTTGGTCGGGGGGGATTCCCTCCTTGTCCTGGATCTTGGACTTG 62314
Query 35660 AGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTT 35719
| | | | | ||||||||||| |||||||| | ||||| || || ||||| | ||
Sbjct 62315 ACATTGTCGATGGTGTCGCTCGACTCCACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTC 62374
Query 35720 TTCACAAATATCTGCAT 35736
|| || || ||||||||
Sbjct 62375 TTGACGAAGATCTGCAT 62391
>seq698
Length=460427
Score = 105 bits (116), Expect = 6e-18
Identities = 132/181 (73%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||| || |||||||| |||| | |||||| | || || |||||||| || || ||
Sbjct 203540 TCCTTCTGGATGTTGTAGTCGGATAGGGTTCGGCCATCCTCAAGCTGCTTGCCGGCGAAG 203481
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
||||| ||||||||||| | ||||| || |||||||||| ||||| ||| | | |
Sbjct 203480 ATCAATCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTG 203421
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | |||||| ||| || ||||||| ||||| || || || || | || || |||
Sbjct 203420 TCGATGGTGTCGGACGACTCGACCTCCAAGGTGATGGTCTTTCCGGTAAGGGTCTTTACA 203361
Query 35726 A 35726
|
Sbjct 203360 A 203360
Score = 102 bits (112), Expect = 7e-17
Identities = 150/210 (71%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587
||||| || | |||| |||||| || |||||||| ||| || || || |||| |||
Sbjct 204014 ACCAAGTGGAGCGTAGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGACCGTCCTCC 203955
Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647
|||||||| || || || || | || || || || | ||||| || |||||||||
Sbjct 203954 AGCTGCTTTCCAGCGAAGATGAGACGTTGTTGATCAGGAGGAATGCCTTCCTTGTCCTGA 203895
Query 35648 ATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706
||||| ||||| |||| | | |||||| ||||| || || | || || || ||
Sbjct 203894 ATCTTGCTCTTCA-CGTTGTCGATGGTGTCGGAAGATTCAACTTCGAGGGTAATTGTCTT 203836
Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|||||||| || || ||||| || |||||
Sbjct 203835 CCCCGTCAATGTCTTGACAAAGATTTGCAT 203806
Score = 98.7 bits (108), Expect = 9e-16
Identities = 139/193 (72%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| ||||||||||| ||| || ||||| | || |||| ||||||||| |||||
Sbjct 203769 CTCCTTCTGAATGTTGTAGTCGCTCAGCGTTCGGCCATCCTCCAACTGCTTACCGGCAAA 203710
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | || || ||||| | || | | |||||||||| |||| || | || ||
Sbjct 203709 GATAAGTCGTTGTTGGTCGGGCGGGATTCCCTCCTTGTCCTGGATC-TTGGATTTGACGT 203651
Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723
|| | | |||||| || |||||||| | ||||| || || || || | ||| ||||
Sbjct 203650 TGTCGATCGTGTCCGAAGACTCCACCTCAAGGGTGATTGTCTTGCCAGTGAGAGTCTTCA 203591
Query 35724 CAAATATCTGCAT 35736
| ||||| |||||
Sbjct 203590 CGAATATTTGCAT 203578
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450789401984600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |