Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq737 129 6e-25 seq698 129 6e-25 seq27 98.7 1e-15 >seq737 Length=337091 Score = 129 bits (142), Expect = 6e-25 Identities = 168/231 (73%), Gaps = 1/231 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | |||||||| || ||||| ||||| || |||||||||||| | Sbjct 284528 CCACCACGGAGACGGAGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAA 284587 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | ||| ||||| || ||||| || || |||| |||||| || ||||| || Sbjct 284588 AGAGTTCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCGGGGGGG 284647 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || |||||||| ||||| ||| | |||||||| || ||||| Sbjct 284648 ATGCCCTCCTTGTCCTGAATTTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACC 284707 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAAT-TTGCATTTT 134716 ||||| || || || ||||| || | || || ||||| | ||| ||||| Sbjct 284708 TCGAGGGTGATAGTCTTACCCGTAAGGGTCTTCACGAAGCTATTGAATTTT 284758 >seq698 Length=460427 Score = 129 bits (142), Expect = 6e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 134483 CTTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC 134542 || |||||| | ||| || | || | ||| ||||| || ||||| || ||||||||||| Sbjct 204036 CTGTCCTCCACGGAGACGGAGAACCAAGTGGAGCGTAGACTCCTTCTGGATGTTGTAGTC 203977 Query 134543 GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGG 134602 || | ||| || ||| || ||||| || || || || || | ||| || ||||| || Sbjct 203976 GCTCAGAGTGCGACCGTCCTCCAGCTGCTTTCCAGCGAAGATGAGACGTTGTTGATCAGG 203917 Query 134603 CGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTC 134662 || |||||||| || || ||||| || || || ||| | |||||||| ||||| Sbjct 203916 AGGAATGCCTTCCTTGTCCTGAATCTTGCTCTTCACGTTGTCGATGGTGTCGGAAGATTC 203857 Query 134663 CACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || ||||| ||||| || || || || || || || || || |||||||| Sbjct 203856 AACTTCGAGGGTAATTGTCTTCCCCGTCAATGTCTTGACAAAGATTTGCAT 203806 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | |||||||| || ||||||||||| || |||||||||||| Sbjct 203576 CCACCACGGAGACGGAGGACGAGGTGAAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAT 203517 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || || ||||| ||||| || || ||||| |||||||| || || || Sbjct 203516 AGGGTTCGGCCATCCTCAAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCAGGAGGA 203457 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || ||||| || ||||| ||| | ||||||||||| || || Sbjct 203456 ATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCGATGGTGTCGGACGACTCGACC 203397 Query 134667 TCGAGAGTAATGGTTTTACCGGT 134689 || | || ||||| || ||||| Sbjct 203396 TCCAAGGTGATGGTCTTTCCGGT 203374 Score = 107 bits (118), Expect = 2e-18 Identities = 152/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || ||||| || ||| ||||| || |||||||||||| || ||| || ||| || Sbjct 203269 ACAAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGACCGTCTTCA 203210 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 || || || || || |||||||| ||||| || || || || ||||| || || || || Sbjct 203209 AGTTGCTTTCCGGCGAAAATCAATCGCTGTTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 203150 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || || || ||| | || || || ||||| || || ||||| ||||| || Sbjct 203149 ATCTTCGACTTAACGTTGTCGATGGTATCCGAGGATTCGACCTCAAGAGTGATGGTCTTG 203090 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCATTTTGT 134718 ||||| | || || ||||| || ||||| |||| Sbjct 203089 CCGGTGAGGGTCTTGACGAAGATCTGCATCTTGT 203056 Score = 104 bits (114), Expect = 2e-17 Identities = 156/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC-CAACGGTGTG 134554 ||||| | || ||||| || || || ||||| |||||||||||||||| || || | | Sbjct 203795 AGTCGGAGAACAAGGTGCAGGGTCGACTCCTTCTGAATGTTGTAGTCGCTCAGCGTTCGG 203736 Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614 | || || | ||| || || ||||| || | || || || |||||||| || || || Sbjct 203735 CCA-TCCTCCAACTGCTTACCGGCAAAGATAAGTCGTTGTTGGTCGGGCGGGATTCCCTC 203677 Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674 || || || || || |||||| ||| | ||||| || || ||||| || || || Sbjct 203676 CTTGTCCTGGATCTTGGATTTGACGTTGTCGATCGTGTCCGAAGACTCCACCTCAAGGGT 203617 Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || | ||| || ||||| |||||||| Sbjct 203616 GATTGTCTTGCCAGTGAGAGTCTTCACGAATATTTGCAT 203578 >seq27 Length=240170 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||||||||| || ||| ||||| || |||||||||||| Sbjct 62165 CCACCACGGAGGCGGAGCACGAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 62224 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | ||| ||||| || ||||| || || |||| ||||| || ||||| || Sbjct 62225 AGAGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATCAGTCGCTGTTGGTCGGGGGGG 62284 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || || || || ||||| ||| | |||||| ||| ||||| Sbjct 62285 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGCTCGACTCCACC 62344 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || || || || | || || ||||| || ||||| Sbjct 62345 TCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 62391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505393693477400