Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq434 197 2e-45 seq334 91.5 2e-13 >seq434 Length=564148 Score = 197 bits (218), Expect = 2e-45 Identities = 689/1066 (65%), Gaps = 16/1066 (2%) Strand=Plus/Minus Query 69352 ATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAAC 69411 ||||| || || || | ||| || ||||| ||| ||| ||||||||||| || || Sbjct 552500 ATAGTACCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAAAGCATGAAG 552441 Query 69412 GGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTAT- 69470 || | ||||| ||| |||||| ||||| ||| | | ||| | | ||| || || Sbjct 552440 GGGTTTCCAGTCTCAGTCTGAGCTTCGAGAATGGCATACCACAGCTTCTGAGCCTTAATC 552381 Query 69471 TACGGTCTTGTAACGCTTCTCTTTTTCATA-TTGT-GTATATAGCCGTTCGAATTCATCT 69528 | | | | | ||| |||| ||| || || | ||| | ||| || || || || Sbjct 552380 TTCTGGCG-GCCACGACCCTCTGCTTCGTACTTCTCGTACAGGGCC--TCAAACTCGTCG 552324 Query 69529 CCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCA 69588 || | ||||| | | ||||| ||||| || || ||||| | | |||| | ||| Sbjct 552323 CCATAGACATCGGCTAGGCCAGGGCATTCGTTGGGGCACATGAGGGTCCACTCGCCATTC 552264 Query 69589 TCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTT 69648 | || || || ||||| || || ||||||||||||||||| | || ||||| | || Sbjct 552263 TTCTCGACACGCTTCATGAAGAGGTCGGGAATCCAAAGAGCCAGGAAAAGATCACGGGCA 552204 Query 69649 CTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGC 69708 | |||||| || || || ||| ||| || || ||||| | || ||| || ||| Sbjct 552203 CGGACTTCTTCCTTGCCGTGGTTCTTTCGAAGGTCCAGGAACTCGAAAACATCCGAGTGC 552144 Query 69709 CATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTAT 69768 || || || ||||| || || | | || |||| || || || ||||| |||| |||| Sbjct 552143 CAAGGCTCGAGATAGATGGCAAAAGCACCAGGTCTCTTGTTGCCACCCTGGTCTACGTAT 552084 Query 69769 CTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTT 69828 || ||||||||||| |||| | ||||| || | |||||| || || | || || || Sbjct 552083 CTAGCAGTGTTATTGAAGACACGGAGCATGGGTACAATACCGTTCGAGGTGCCGTTAGTG 552024 Query 69829 CCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCC 69888 || | ||| || || | |||||||| || ||||| || || || ||| Sbjct 552023 CCGGCAATGTATGAGCCGGTAGCGCGAATGCGGTGGATGTTGAGACCAATACCACCGGCC 551964 Query 69889 ATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCT 69948 || || ||||| | || || || | ||||| || |||||||| ||||| || || Sbjct 551963 ATCTTGGAGATCATGGCGCAGGTCTTAAGGGTGTCGTAGATACCCTCAATGCTGTCGTCC 551904 Query 69949 ATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAAT 70008 |||||| || || || ||| || | ||| || ||||| ||||| || | Sbjct 551903 TTCATGTCAACGAGGAAGCAGGATGAGAGCTGAGCCTGGGGTGTTCCAGCATTGAAGAGA 551844 Query 70009 GTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGAT 70068 || || || || || ||||| |||| || | || || || || | ||| | Sbjct 551843 GTTGGGGAGGCATGGGTGAAGTATTTGCTGGACATGAGGTTATAGGTCTGTATAACCTTC 551784 Query 70069 TCTATATC----CCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCG 70124 || | ||| || | |||| || | || |||||||| | ||| ||||| |||| Sbjct 551783 TCCACATCATCACCCCAGATG----CCGACAGCCACACGCATGATCATGTGCTGCGGTCT 551728 Query 70125 TTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAA 70184 || || | |||| | | || | ||| |||||| |||| ||| || || || || Sbjct 551727 CTCGACGATCTTATCGTCAAGCTTGAGCAGATATGATCGCTCCAAAGTCTTGAAGCCGAA 551668 Query 70185 ATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTT 70244 || | ||| |||||||| || || | ||| |||| | | | ||||| | | | Sbjct 551667 GTATTGGTAGTTGAAGTCTCTGTCATAGACAATGGCAGAGTCAAAGTCCTCCTTGTGTCT 551608 Query 70245 GGTAACTATATCCATAACAGTAGGT-GAGATAATCGGAGATCGTTTACCATTTTTAGGAT 70303 | || | | | || | | ||||| || |||||| | || | || || || | Sbjct 551607 CATGAC-ACACTCGTAGGTCTCCTTAGAGATCATAGGAGATGGCTTTCTGTTCTTTGGGT 551549 Query 70304 TAACATAGTTGAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTA 70363 | ||||||| | | | ||| || ||| || | | || || || | |||||||| Sbjct 551548 TGACATAGTGGTAGAGATCACTGATGACAGCAGACCACTGCTTCTTGGTCTGCTTGTGTA 551489 Query 70364 AATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATG 70409 ||||| | ||| || | || || || || |||||||| || || Sbjct 551488 GGTTTGACACGGCAATACGTGCAGCGAGGATGGCATAGTCTGGGTG 551443 >seq334 Length=652976 Score = 91.5 bits (100), Expect = 2e-13 Identities = 363/568 (64%), Gaps = 10/568 (2%) Strand=Plus/Minus Query 39608 AACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAA 39667 |||| || |||||||||||| || || ||||| || | || | |||||||| Sbjct 128933 AACAGTAGGCAGGCGAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTAGAG 128874 Query 39668 AATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCA 39727 || || || || ||||| ||||||||||| |||||||| || |||| || || | || Sbjct 128873 AAGGTCAGGCCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCG 128814 Query 39728 GAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCA 39787 ||||||||||| || || || ||||| || | | | || || || || | | Sbjct 128813 CTGAAGAAGATGCCCTCGACGGCGGCAAAGGCGATCAAACGCTGGGCG-AAGGTGGA-CT 128756 Query 39788 TTATGT-----ATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTT 39842 | ||| ||||| | | | ||||| || || ||| | | ||||| || || | Sbjct 128755 TCTTGTCAGCGATCCAGTGCAGGGCCCAGTCCGCCTTCCTGCGGATGCAAGGGATGGTGT 128696 Query 39843 CTATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACA 39902 | || || || ||||||| || | | || || | ||||| || || | | Sbjct 128695 CGATGGCGTTGAAGAGATGGGTCTTCTGGGCGGGCTCCTTGATGTATGTGTCAATGAGGA 128636 Query 39903 GACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTG 39962 || || | || || |||||||| || ||| ||||| || ||||| || |||| | Sbjct 128635 GAGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGCG 128576 Query 39963 CTTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCAT 40022 | || | ||| || ||||| | | |||| || | | || || || || || || | Sbjct 128575 CCTCGGGAATCTGGACCTCGCCAGAGAATCGCTCGACAAGGTTCTCGTTGACAATGCCGT 128516 Query 40023 CACTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATATTT---TTCATCGGGTGTCA 40079 | ||||| ||||| || | | || || || | || |||||| | Sbjct 128515 CGGATGCGGCGAAAAAGGCAAGGATGTGGGAGATGAAGAACTTCTCATCATCGTTTAGGC 128456 Query 40080 ATTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACG 40139 || ||||||| | || ||| || || | ||| | || ||||| ||||| || || | Sbjct 128455 GGTTGCTCCAGTCGTGGAGATCCTTGGAGAGATCAATCTCCTCAGCGGTCCAGAAGGAAG 128396 Query 40140 CCTCTGCCTTTTTGTACATGTTCCATAT 40167 | || ||| |||||||| | ||| || Sbjct 128395 CTTCGTGCTTCTTGTACATCTGCCAGAT 128368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686902403161800