Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02-
23] 745 sequences; 39,901,278 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq434 197 2e-45
seq334 91.5 2e-13
>seq434
Length=564148
Score = 197 bits (218), Expect = 2e-45
Identities = 689/1066 (65%), Gaps = 16/1066 (2%)
Strand=Plus/Minus
Query 69352 ATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAAC 69411
||||| || || || | ||| || ||||| ||| ||| ||||||||||| || ||
Sbjct 552500 ATAGTACCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAAAGCATGAAG 552441
Query 69412 GGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTAT- 69470
|| | ||||| ||| |||||| ||||| ||| | | ||| | | ||| || ||
Sbjct 552440 GGGTTTCCAGTCTCAGTCTGAGCTTCGAGAATGGCATACCACAGCTTCTGAGCCTTAATC 552381
Query 69471 TACGGTCTTGTAACGCTTCTCTTTTTCATA-TTGT-GTATATAGCCGTTCGAATTCATCT 69528
| | | | | ||| |||| ||| || || | ||| | ||| || || || ||
Sbjct 552380 TTCTGGCG-GCCACGACCCTCTGCTTCGTACTTCTCGTACAGGGCC--TCAAACTCGTCG 552324
Query 69529 CCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCA 69588
|| | ||||| | | ||||| ||||| || || ||||| | | |||| | |||
Sbjct 552323 CCATAGACATCGGCTAGGCCAGGGCATTCGTTGGGGCACATGAGGGTCCACTCGCCATTC 552264
Query 69589 TCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTT 69648
| || || || ||||| || || ||||||||||||||||| | || ||||| | ||
Sbjct 552263 TTCTCGACACGCTTCATGAAGAGGTCGGGAATCCAAAGAGCCAGGAAAAGATCACGGGCA 552204
Query 69649 CTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGC 69708
| |||||| || || || ||| ||| || || ||||| | || ||| || |||
Sbjct 552203 CGGACTTCTTCCTTGCCGTGGTTCTTTCGAAGGTCCAGGAACTCGAAAACATCCGAGTGC 552144
Query 69709 CATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTAT 69768
|| || || ||||| || || | | || |||| || || || ||||| |||| ||||
Sbjct 552143 CAAGGCTCGAGATAGATGGCAAAAGCACCAGGTCTCTTGTTGCCACCCTGGTCTACGTAT 552084
Query 69769 CTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTT 69828
|| ||||||||||| |||| | ||||| || | |||||| || || | || || ||
Sbjct 552083 CTAGCAGTGTTATTGAAGACACGGAGCATGGGTACAATACCGTTCGAGGTGCCGTTAGTG 552024
Query 69829 CCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCC 69888
|| | ||| || || | |||||||| || ||||| || || || |||
Sbjct 552023 CCGGCAATGTATGAGCCGGTAGCGCGAATGCGGTGGATGTTGAGACCAATACCACCGGCC 551964
Query 69889 ATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCT 69948
|| || ||||| | || || || | ||||| || |||||||| ||||| || ||
Sbjct 551963 ATCTTGGAGATCATGGCGCAGGTCTTAAGGGTGTCGTAGATACCCTCAATGCTGTCGTCC 551904
Query 69949 ATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAAT 70008
|||||| || || || ||| || | ||| || ||||| ||||| || |
Sbjct 551903 TTCATGTCAACGAGGAAGCAGGATGAGAGCTGAGCCTGGGGTGTTCCAGCATTGAAGAGA 551844
Query 70009 GTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGAT 70068
|| || || || || ||||| |||| || | || || || || | ||| |
Sbjct 551843 GTTGGGGAGGCATGGGTGAAGTATTTGCTGGACATGAGGTTATAGGTCTGTATAACCTTC 551784
Query 70069 TCTATATC----CCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCG 70124
|| | ||| || | |||| || | || |||||||| | ||| ||||| ||||
Sbjct 551783 TCCACATCATCACCCCAGATG----CCGACAGCCACACGCATGATCATGTGCTGCGGTCT 551728
Query 70125 TTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAA 70184
|| || | |||| | | || | ||| |||||| |||| ||| || || || ||
Sbjct 551727 CTCGACGATCTTATCGTCAAGCTTGAGCAGATATGATCGCTCCAAAGTCTTGAAGCCGAA 551668
Query 70185 ATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTT 70244
|| | ||| |||||||| || || | ||| |||| | | | ||||| | | |
Sbjct 551667 GTATTGGTAGTTGAAGTCTCTGTCATAGACAATGGCAGAGTCAAAGTCCTCCTTGTGTCT 551608
Query 70245 GGTAACTATATCCATAACAGTAGGT-GAGATAATCGGAGATCGTTTACCATTTTTAGGAT 70303
| || | | | || | | ||||| || |||||| | || | || || || |
Sbjct 551607 CATGAC-ACACTCGTAGGTCTCCTTAGAGATCATAGGAGATGGCTTTCTGTTCTTTGGGT 551549
Query 70304 TAACATAGTTGAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTA 70363
| ||||||| | | | ||| || ||| || | | || || || | ||||||||
Sbjct 551548 TGACATAGTGGTAGAGATCACTGATGACAGCAGACCACTGCTTCTTGGTCTGCTTGTGTA 551489
Query 70364 AATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATG 70409
||||| | ||| || | || || || || |||||||| || ||
Sbjct 551488 GGTTTGACACGGCAATACGTGCAGCGAGGATGGCATAGTCTGGGTG 551443
>seq334
Length=652976
Score = 91.5 bits (100), Expect = 2e-13
Identities = 363/568 (64%), Gaps = 10/568 (2%)
Strand=Plus/Minus
Query 39608 AACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAA 39667
|||| || |||||||||||| || || ||||| || | || | ||||||||
Sbjct 128933 AACAGTAGGCAGGCGAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTAGAG 128874
Query 39668 AATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCA 39727
|| || || || ||||| ||||||||||| |||||||| || |||| || || | ||
Sbjct 128873 AAGGTCAGGCCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCG 128814
Query 39728 GAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCA 39787
||||||||||| || || || ||||| || | | | || || || || | |
Sbjct 128813 CTGAAGAAGATGCCCTCGACGGCGGCAAAGGCGATCAAACGCTGGGCG-AAGGTGGA-CT 128756
Query 39788 TTATGT-----ATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTT 39842
| ||| ||||| | | | ||||| || || ||| | | ||||| || || |
Sbjct 128755 TCTTGTCAGCGATCCAGTGCAGGGCCCAGTCCGCCTTCCTGCGGATGCAAGGGATGGTGT 128696
Query 39843 CTATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACA 39902
| || || || ||||||| || | | || || | ||||| || || | |
Sbjct 128695 CGATGGCGTTGAAGAGATGGGTCTTCTGGGCGGGCTCCTTGATGTATGTGTCAATGAGGA 128636
Query 39903 GACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTG 39962
|| || | || || |||||||| || ||| ||||| || ||||| || |||| |
Sbjct 128635 GAGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGCG 128576
Query 39963 CTTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCAT 40022
| || | ||| || ||||| | | |||| || | | || || || || || || |
Sbjct 128575 CCTCGGGAATCTGGACCTCGCCAGAGAATCGCTCGACAAGGTTCTCGTTGACAATGCCGT 128516
Query 40023 CACTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATATTT---TTCATCGGGTGTCA 40079
| ||||| ||||| || | | || || || | || |||||| |
Sbjct 128515 CGGATGCGGCGAAAAAGGCAAGGATGTGGGAGATGAAGAACTTCTCATCATCGTTTAGGC 128456
Query 40080 ATTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACG 40139
|| ||||||| | || ||| || || | ||| | || ||||| ||||| || || |
Sbjct 128455 GGTTGCTCCAGTCGTGGAGATCCTTGGAGAGATCAATCTCCTCAGCGGTCCAGAAGGAAG 128396
Query 40140 CCTCTGCCTTTTTGTACATGTTCCATAT 40167
| || ||| |||||||| | ||| ||
Sbjct 128395 CTTCGTGCTTCTTGTACATCTGCCAGAT 128368
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686902403161800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |