Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq423 109 4e-19 >seq423 Length=559669 Score = 109 bits (120), Expect = 4e-19 Identities = 218/321 (68%), Gaps = 8/321 (2%) Strand=Plus/Minus Query 19429 CCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAAT 19488 || || ||| | || || || |||||| | || |||||||| |||||||| ||||| || Sbjct 31664 CCGAAGATTATCAACGGCCCGGAAATCCTCAACAAATATGTGGGTCAATCAGAAGAGAAC 31605 Query 19489 GTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCGCAAA-AGTTC 19547 || || |||| || || || ||| |||| | || | |||| | | | ||| Sbjct 31604 GTCAGAAAGATGTTCGCGGATGCAGAAAAAGAGTACAAG-GAGAAGGGTGAAGAGAGTGG 31546 Query 19548 TTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTCTGG--- 19604 ||||| || || || | || ||| ||||||| |||| ||||| |||||| ||| Sbjct 31545 CTTGCATATCATCATCTTCGACGAACTGGACGCTGTCTGCAAGCAGAGAGGTAGTGGAAC 31486 Query 19605 ---TGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGT 19661 || | ||| || ||||| ||| ||||| || ||| |||| ||| | || ||||| Sbjct 31485 AGGTGGTACTGGTGTTGGTGACAGTGTAGTCAACCAGCTCTTGTCCAAACTCGATGGTGT 31426 Query 19662 TAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAG 19721 | || || || || || || | ||||||||||| || || ||| | || || Sbjct 31425 GGATCAGCTCAACAACATATTGCTGATTGGCATGACCAACCGAAAGGATATGATTGATGA 31366 Query 19722 CGCCTTATTACGACCCGGTCG 19742 ||| |||| ||||| ||||| Sbjct 31365 TGCCCTATTGCGACCAGGTCG 31345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397452391223725