Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02-
23] 745 sequences; 39,901,278 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq423 109 4e-19
>seq423
Length=559669
Score = 109 bits (120), Expect = 4e-19
Identities = 218/321 (68%), Gaps = 8/321 (2%)
Strand=Plus/Minus
Query 19429 CCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAAT 19488
|| || ||| | || || || |||||| | || |||||||| |||||||| ||||| ||
Sbjct 31664 CCGAAGATTATCAACGGCCCGGAAATCCTCAACAAATATGTGGGTCAATCAGAAGAGAAC 31605
Query 19489 GTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCGCAAA-AGTTC 19547
|| || |||| || || || ||| |||| | || | |||| | | | |||
Sbjct 31604 GTCAGAAAGATGTTCGCGGATGCAGAAAAAGAGTACAAG-GAGAAGGGTGAAGAGAGTGG 31546
Query 19548 TTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTCTGG--- 19604
||||| || || || | || ||| ||||||| |||| ||||| |||||| |||
Sbjct 31545 CTTGCATATCATCATCTTCGACGAACTGGACGCTGTCTGCAAGCAGAGAGGTAGTGGAAC 31486
Query 19605 ---TGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGT 19661
|| | ||| || ||||| ||| ||||| || ||| |||| ||| | || |||||
Sbjct 31485 AGGTGGTACTGGTGTTGGTGACAGTGTAGTCAACCAGCTCTTGTCCAAACTCGATGGTGT 31426
Query 19662 TAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAG 19721
| || || || || || || | ||||||||||| || || ||| | || ||
Sbjct 31425 GGATCAGCTCAACAACATATTGCTGATTGGCATGACCAACCGAAAGGATATGATTGATGA 31366
Query 19722 CGCCTTATTACGACCCGGTCG 19742
||| |||| ||||| |||||
Sbjct 31365 TGCCCTATTGCGACCAGGTCG 31345
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397452391223725
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |