Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq334 118 3e-21 >seq334 Length=652976 Score = 118 bits (130), Expect = 3e-21 Identities = 356/539 (66%), Gaps = 17/539 (3%) Strand=Plus/Plus Query 443337 TTTTGGACCATGGAGGAGATTGATCTCTCCAAGGACTTGGCCGATTGGAACGAACGACTA 443396 || |||||| ||||||||||||||||||||||| | ||| |||| | | || ||| Sbjct 128401 TTCTGGACCGCTGAGGAGATTGATCTCTCCAAGGATCTCCACGACTGGAGCAACCGCCTA 128460 Query 443397 TCTAGCCATGAACGCGATTTCTTCAAATGC---ATCTTGGCCTTCTTTGCACCGAGCGAC 443453 | | |||| | ||||||| | | ||| | ||||| || || | |||| Sbjct 128461 ---AACGATGATGAGAAGTTCTTCATCTCCCACATCCTTGCCTTTTTCGCCGCATCCGAC 128517 Query 443454 GGTATCGTCGGTGAGAATCTGGTGACGCGTTTCTACGAAATGGTAGTGTACACCGAGGCC 443513 || || ||| ||||| || || ||| |||| | ||| | ||||||| Sbjct 128518 GGCATTGTCAACGAGAACCTTGTCGAGCGATTCTCTGGCGAGGTCCAGATTCCCGAGGCG 128577 Query 443514 CGCTACTTCTACGCGTTCCAAGCCGCAATGGAGAACATTCACGCCGAGGTCTACAGTCAG 443573 || | |||||||| ||||| | ||||||||||| ||| ||||| |||| || Sbjct 128578 CGATGCTTCTACGGTTTCCAGATCATGATGGAGAACATCCACTCCGAGACCTACTCTCTC 128637 Query 443574 TTGATCAAGACACTAATTCCGAACGAAGACGAACAGCGGTCC-ATCTTCTCATCGT--TC 443630 | || | ||| || || || || || ||| | || |||| ||| || || Sbjct 128638 CTCATTGACACA-TACATC--AAGGAGCCCGCCCAGAAGACCCATCTCTTCAACGCCATC 128694 Query 443631 ATGACCACGCCAGGCATCACTGAAAAGACTCGCTGGGCAAAACAGTGGCTCGA--ACGAG 443688 |||| || ||||| ||| | |||||| || ||| ||| || || Sbjct 128695 GACACCATCCCTTGCATCCGCAGGAAGGCGGACTGGGCCCTGCACTGGATCGCTGACAAG 128754 Query 443689 AAAATCTCAGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTA 443748 || || || ||||| | |||| | |||| ||||| | ||||| || | || || | Sbjct 128755 AAG-TC-CACCTTCGCCCAGCGTTTGATCGCCTTTGCCGCCGTCGAGGGCATCTTCTTCA 128812 Query 443749 GCGGCAGCTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACC 443808 |||| || || ||||||||||||||| | || |||||||| || |||| ||| |||||| Sbjct 128813 GCGGT-GCCTTCGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGCCTGACC 128871 Query 443809 TTTAGTAACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCT 443867 || |||||| || ||| || ||||||||| | || |||||||||||| || || Sbjct 128872 TTCTCTAACGAGCTCATCTCGCGTGACGAGGGTCTCCACACCGACTTCGCCTGCCTACT 128930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588320838836525