Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq434 163 4e-35 seq334 100 4e-16 >seq434 Length=564148 Score = 163 bits (180), Expect = 4e-35 Identities = 891/1400 (64%), Gaps = 45/1400 (3%) Strand=Plus/Minus Query 110708 TAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 110767 ||||| || | ||||| || || ||||||||||| ||||||| ||| || | || | Sbjct 553109 TAGATATTCGAGGTGTAAGGCTCGAAGCATTCATTGTTACCCAGGATCTGGGAAGTACTG 553050 Query 110768 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCC 110827 ||||| ||||| || || | ||| | ||||| || | ||| | | ||| || ||| Sbjct 553049 GCTGTAGGCATGGGGGCGACCAACAAGCTGTTGCGTACACCAGTTTGCTTAATTTTCTCC 552990 Query 110828 TTGAGAACATCCCAGTCGTAGTTGAGCTT--GGTTTCACCTTCCCACATGTCAAACTGAA 110885 || || |||||| || || | || | || |||| ||||||| | |||| Sbjct 552989 TTTAGGCTTGTCCAGTCCCAGA-GATCCGACGGGGTGACATTCC-ACATGTCGTATTGAA 552932 Query 110886 GCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCA 110945 | | || || || | |||||||| ||| |||| || | || | | | || | Sbjct 552931 GGATACCCTGCGAGACAGGAGAACCTTCATAGGTAGAGTAAGGTCCATCAACCTTGGCAA 552872 Query 110946 ATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCT 111005 || | ||| || || || || || || || || ||||| | |||| || Sbjct 552871 TATCCGAAGACGCAGTCAAGGCGGCATGGTAGATTGTCTCGAAGATCTGCTTGTTCAGCT 552812 Query 111006 CCTTGGCTTCATCTGAATCAAA-----TGCGTAGCGGCACAAAATAAATACATCCGCGAG 111060 | |||| || ||| || || |||| |||| || || | ||| || || Sbjct 552811 GCCTGGCCTCTGGTGACTCGAAAGGCATGCGCAGCGCCAGGAA-----TGTATCAGCAAG 552757 Query 111061 ACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA-A 111119 ||| |||||||| | |||||| || | ||||||||| || || || || ||| | Sbjct 552756 ACCCTGAACACCAAGACCAATGGGACGGTGTCGCATGTTGCTGTTACGGGCC-TCTGGGA 552698 Query 111120 CGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTT 111179 |||| || | || |||||||| || ||| || || | || | | || | | Sbjct 552697 CGGGGTAGTAGTTGACGTCAATGATTCTGTTCAGGTTGTGAACGACGACTTGAGTAACCT 552638 Query 111180 CATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGG---- 111235 |||| | || | | ||| | || | ||| | || | || || || || Sbjct 552637 CATGCAACTTCTGGAAGTCATAGGTTCC---CTCGTTATAGTCA-ACGAATGACGGCAAC 552582 Query 111236 GCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCT 111295 || | || ||||| |||||||||||| ||| || | | |||||| | || || Sbjct 552581 GCAAGGGAAGCCAAGTTGCAAACAGCCACCTCGTCAGGGGCAGAGTACTCGATGATCTCA 552522 Query 111296 GTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCAC 111355 || || | ||| || || ||| || || | ||||| ||||| ||||| |||||| Sbjct 552521 GTGCAGAGGTTCGAGCTGCGAATAGTACCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAG 552462 Query 111356 GCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTC 111415 ||||||||| |||||| |||| | || ||||| ||||| | || |||||| || | | Sbjct 552461 TGATCCTTGTAAAGCATGAAGGGGTTTCCAGTCTCAGTCTGAGCTTCGAGAATGGCATAC 552402 Query 111416 CA-AACATCGGCGGC-TGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGT 111473 || | | || | | | | | ||||| | | || ||||| || |||||||| || Sbjct 552401 CACAGCTTCTGAGCCTTAATCTTCTGGCG--GCCACGACCCTCTGCTTCGTACTTCTCGT 552344 Query 111474 AGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT-GTCTGGACAG 111532 | ||||| |||||||| || || | |||| || || || || || || || || Sbjct 552343 ACAGGGCCTCAAACTCGTCGCCATAGACATCGGCTAGGCCAGG-GCATTCGTTGGGGCAC 552285 Query 111533 AAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGG 111592 | || | ||| | ||| | ||| || ||||||||||| ||||| |||||||| || Sbjct 552284 ATGAGGGTCCACTCGCCATTCTTCTCGACACGCTTCATGAAGAGGTCGGGAATCCAAAGA 552225 Query 111593 G--ATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCA 111649 | | |||| ||||| | ||| || | ||||| | || ||||| ||| | || Sbjct 552224 GCCAGGAAA--AGATCACGGGCACGGA-CTTCTTCCTTGCCGTGGTTCTTTCGAAGGTCC 552168 Query 111650 AGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTT 111705 |||||||| | | ||||| |||||| ||||| ||||||| || | || || || Sbjct 552167 AGGAACTCGAAAACATCCGAGTGCCAAGGCTCGAGATAGATGGCAAAAGCACCAGGTCTC 552108 Query 111706 TCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAAT 111765 | | | ||| | || | ||| || | || ||| || || || || ||||| || | Sbjct 552107 TTGTTG-CCACCCTGGTCTACGTATCTAGCAGTGTTATTGAAGACACGGAGCATGGGTAC 552049 Query 111766 AATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATG 111825 |||||| | || || || || || ||| || | || | | || Sbjct 552048 AATACCGTTCGAGGTGCCGTTAGTGCCGGCAATGTATGAGCCGGTAGCGCGAATGCGGTG 551989 Query 111826 GATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCC 111885 ||||| | |||||||| || ||| ||| ||||| || || | |||| || | Sbjct 551988 GATGTTGAGACCAATACCACCGGCCATCTTGGAGATCATGGCGCAGGTCTTAAGGGTGTC 551929 Query 111886 ATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGG 111945 |||||||| | || ||| ||||| || | | |||||||| || | ||| | Sbjct 551928 GTAGATACCCTCAATGCTGTCGTCCTTCATGTCAACGAGGAAGCAGGATGAGAGCTGAGC 551869 Query 111946 TCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GGAC 112003 ||||| |||||||||||||| ||||| | || || |||| || ||| |||| Sbjct 551868 CTGGGGTGTTCCAGCATTGAAGAGAGTTGGGGAGGCATGGGTGAA-GTA-TTTGCTGGAC 551811 Query 112004 ATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACC 112063 || || || |||| | || || | || || || |||||||| || || Sbjct 551810 ATGAGGTTATAGGTCTGTATAACCTTCTCCACATCATCACCCCAGATGCCGACAGCCACA 551751 Query 112064 CGCATGAACATGTACTGTGG 112083 ||||||| ||||| ||| || Sbjct 551750 CGCATGATCATGTGCTGCGG 551731 >seq334 Length=652976 Score = 100 bits (110), Expect = 4e-16 Identities = 336/514 (65%), Gaps = 17/514 (3%) Strand=Plus/Minus Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729 |||||||||||| || || || || || || || |||||| || || ||||||||||| Sbjct 128910 GTGGAGACCCTCGTCACGCGAGATGAGCTCGTTAGAGAAGGTCAGGCCGGGCATGAGACC 128851 Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 122789 |||||||| | ||| | || | | ||| | ||| ||||||||| ||||| || Sbjct 128850 ACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCGCTGAAGAAGATGCCCTCGACGGC 128791 Query 122790 CGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACT--TTG-CATCAAACCATTTCAT 122846 ||||| || | | || | |||||||| | |||| ||| || | | ||| | || Sbjct 128790 GGCAAAGGCGATCAAACGCTGGGCGAAGGTG---GACTTCTTGTCAGCGATCCAGTGCAG 128734 Query 122847 TGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACTGCTT 122906 ||||| | ||||||| | || || || | || | |||||| | || | || | Sbjct 128733 GGCCCAGTCCGCCTTCCTGCGGATGCAAGGGATGGTGTCGATGGCGTTGAAGAGATGGGT 128674 Query 122907 CTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGCCATGAAC 122966 ||| | | ||||| |||||| ||||||| | || || || ||| || | Sbjct 128673 CTTCTGGGCGGGCTCCTTGATGTATGTGTCAATGAGGAGAGAGTAGGTCTCGGAGTGGAT 128614 Query 122967 CAT-TTCATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGAACCTCAT 123025 | | ||| ||| | || | ||||||| | ||||| ||| ||||| ||||| Sbjct 128613 GTTCTCCATCATGATCTGGA-AACCGTAGAAGCATCGCGCCTCGGGAATCTGGACCTC-G 128556 Query 123026 CCGCAAAATTGTTATTGATA---TTCTCAAAAACAATTCCATCGGACCCAGCAAAGAATG 123082 || | ||| | | || | ||||| ||||| || ||||| | || || || | Sbjct 128555 CCAGAGAATCG--CTCGACAAGGTTCTCGTTGACAATGCCGTCGGATGCGGCGAAAAAGG 128498 Query 123083 CCAGGATGTACTTTATGAATTTCTTTTCATTTTCATTCA---GGGTCTTCCAGTCGTCAA 123139 | ||||||| ||||| ||| |||| || || | || | ||||||||| | Sbjct 128497 CAAGGATGTGGGAGATGAAGAACTTCTCATCATCGTTTAGGCGGTTGCTCCAGTCGTGGA 128438 Query 123140 GATCTTTGGACAAATCAACTTCTTCCGCAGTCCA 123173 |||| ||||| | ||||| || || || ||||| Sbjct 128437 GATCCTTGGAGAGATCAATCTCCTCAGCGGTCCA 128404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628026151452000