Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02-
23] 745 sequences; 39,901,278 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq434 163 4e-35
seq334 100 4e-16
>seq434
Length=564148
Score = 163 bits (180), Expect = 4e-35
Identities = 891/1400 (64%), Gaps = 45/1400 (3%)
Strand=Plus/Minus
Query 110708 TAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 110767
||||| || | ||||| || || ||||||||||| ||||||| ||| || | || |
Sbjct 553109 TAGATATTCGAGGTGTAAGGCTCGAAGCATTCATTGTTACCCAGGATCTGGGAAGTACTG 553050
Query 110768 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCC 110827
||||| ||||| || || | ||| | ||||| || | ||| | | ||| || |||
Sbjct 553049 GCTGTAGGCATGGGGGCGACCAACAAGCTGTTGCGTACACCAGTTTGCTTAATTTTCTCC 552990
Query 110828 TTGAGAACATCCCAGTCGTAGTTGAGCTT--GGTTTCACCTTCCCACATGTCAAACTGAA 110885
|| || |||||| || || | || | || |||| ||||||| | ||||
Sbjct 552989 TTTAGGCTTGTCCAGTCCCAGA-GATCCGACGGGGTGACATTCC-ACATGTCGTATTGAA 552932
Query 110886 GCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCA 110945
| | || || || | |||||||| ||| |||| || | || | | | || |
Sbjct 552931 GGATACCCTGCGAGACAGGAGAACCTTCATAGGTAGAGTAAGGTCCATCAACCTTGGCAA 552872
Query 110946 ATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCT 111005
|| | ||| || || || || || || || || ||||| | |||| ||
Sbjct 552871 TATCCGAAGACGCAGTCAAGGCGGCATGGTAGATTGTCTCGAAGATCTGCTTGTTCAGCT 552812
Query 111006 CCTTGGCTTCATCTGAATCAAA-----TGCGTAGCGGCACAAAATAAATACATCCGCGAG 111060
| |||| || ||| || || |||| |||| || || | ||| || ||
Sbjct 552811 GCCTGGCCTCTGGTGACTCGAAAGGCATGCGCAGCGCCAGGAA-----TGTATCAGCAAG 552757
Query 111061 ACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA-A 111119
||| |||||||| | |||||| || | ||||||||| || || || || ||| |
Sbjct 552756 ACCCTGAACACCAAGACCAATGGGACGGTGTCGCATGTTGCTGTTACGGGCC-TCTGGGA 552698
Query 111120 CGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTT 111179
|||| || | || |||||||| || ||| || || | || | | || | |
Sbjct 552697 CGGGGTAGTAGTTGACGTCAATGATTCTGTTCAGGTTGTGAACGACGACTTGAGTAACCT 552638
Query 111180 CATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGG---- 111235
|||| | || | | ||| | || | ||| | || | || || || ||
Sbjct 552637 CATGCAACTTCTGGAAGTCATAGGTTCC---CTCGTTATAGTCA-ACGAATGACGGCAAC 552582
Query 111236 GCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCT 111295
|| | || ||||| |||||||||||| ||| || | | |||||| | || ||
Sbjct 552581 GCAAGGGAAGCCAAGTTGCAAACAGCCACCTCGTCAGGGGCAGAGTACTCGATGATCTCA 552522
Query 111296 GTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCAC 111355
|| || | ||| || || ||| || || | ||||| ||||| ||||| ||||||
Sbjct 552521 GTGCAGAGGTTCGAGCTGCGAATAGTACCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAG 552462
Query 111356 GCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTC 111415
||||||||| |||||| |||| | || ||||| ||||| | || |||||| || | |
Sbjct 552461 TGATCCTTGTAAAGCATGAAGGGGTTTCCAGTCTCAGTCTGAGCTTCGAGAATGGCATAC 552402
Query 111416 CA-AACATCGGCGGC-TGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGT 111473
|| | | || | | | | | ||||| | | || ||||| || |||||||| ||
Sbjct 552401 CACAGCTTCTGAGCCTTAATCTTCTGGCG--GCCACGACCCTCTGCTTCGTACTTCTCGT 552344
Query 111474 AGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT-GTCTGGACAG 111532
| ||||| |||||||| || || | |||| || || || || || || || ||
Sbjct 552343 ACAGGGCCTCAAACTCGTCGCCATAGACATCGGCTAGGCCAGG-GCATTCGTTGGGGCAC 552285
Query 111533 AAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGG 111592
| || | ||| | ||| | ||| || ||||||||||| ||||| |||||||| ||
Sbjct 552284 ATGAGGGTCCACTCGCCATTCTTCTCGACACGCTTCATGAAGAGGTCGGGAATCCAAAGA 552225
Query 111593 G--ATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCA 111649
| | |||| ||||| | ||| || | ||||| | || ||||| ||| | ||
Sbjct 552224 GCCAGGAAA--AGATCACGGGCACGGA-CTTCTTCCTTGCCGTGGTTCTTTCGAAGGTCC 552168
Query 111650 AGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTT 111705
|||||||| | | ||||| |||||| ||||| ||||||| || | || || ||
Sbjct 552167 AGGAACTCGAAAACATCCGAGTGCCAAGGCTCGAGATAGATGGCAAAAGCACCAGGTCTC 552108
Query 111706 TCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAAT 111765
| | | ||| | || | ||| || | || ||| || || || || ||||| || |
Sbjct 552107 TTGTTG-CCACCCTGGTCTACGTATCTAGCAGTGTTATTGAAGACACGGAGCATGGGTAC 552049
Query 111766 AATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATG 111825
|||||| | || || || || || ||| || | || | | ||
Sbjct 552048 AATACCGTTCGAGGTGCCGTTAGTGCCGGCAATGTATGAGCCGGTAGCGCGAATGCGGTG 551989
Query 111826 GATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCC 111885
||||| | |||||||| || ||| ||| ||||| || || | |||| || |
Sbjct 551988 GATGTTGAGACCAATACCACCGGCCATCTTGGAGATCATGGCGCAGGTCTTAAGGGTGTC 551929
Query 111886 ATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGG 111945
|||||||| | || ||| ||||| || | | |||||||| || | ||| |
Sbjct 551928 GTAGATACCCTCAATGCTGTCGTCCTTCATGTCAACGAGGAAGCAGGATGAGAGCTGAGC 551869
Query 111946 TCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GGAC 112003
||||| |||||||||||||| ||||| | || || |||| || ||| ||||
Sbjct 551868 CTGGGGTGTTCCAGCATTGAAGAGAGTTGGGGAGGCATGGGTGAA-GTA-TTTGCTGGAC 551811
Query 112004 ATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACC 112063
|| || || |||| | || || | || || || |||||||| || ||
Sbjct 551810 ATGAGGTTATAGGTCTGTATAACCTTCTCCACATCATCACCCCAGATGCCGACAGCCACA 551751
Query 112064 CGCATGAACATGTACTGTGG 112083
||||||| ||||| ||| ||
Sbjct 551750 CGCATGATCATGTGCTGCGG 551731
>seq334
Length=652976
Score = 100 bits (110), Expect = 4e-16
Identities = 336/514 (65%), Gaps = 17/514 (3%)
Strand=Plus/Minus
Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729
|||||||||||| || || || || || || || |||||| || || |||||||||||
Sbjct 128910 GTGGAGACCCTCGTCACGCGAGATGAGCTCGTTAGAGAAGGTCAGGCCGGGCATGAGACC 128851
Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 122789
|||||||| | ||| | || | | ||| | ||| ||||||||| ||||| ||
Sbjct 128850 ACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCGCTGAAGAAGATGCCCTCGACGGC 128791
Query 122790 CGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACT--TTG-CATCAAACCATTTCAT 122846
||||| || | | || | |||||||| | |||| ||| || | | ||| | ||
Sbjct 128790 GGCAAAGGCGATCAAACGCTGGGCGAAGGTG---GACTTCTTGTCAGCGATCCAGTGCAG 128734
Query 122847 TGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACTGCTT 122906
||||| | ||||||| | || || || | || | |||||| | || | || |
Sbjct 128733 GGCCCAGTCCGCCTTCCTGCGGATGCAAGGGATGGTGTCGATGGCGTTGAAGAGATGGGT 128674
Query 122907 CTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGCCATGAAC 122966
||| | | ||||| |||||| ||||||| | || || || ||| || |
Sbjct 128673 CTTCTGGGCGGGCTCCTTGATGTATGTGTCAATGAGGAGAGAGTAGGTCTCGGAGTGGAT 128614
Query 122967 CAT-TTCATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGAACCTCAT 123025
| | ||| ||| | || | ||||||| | ||||| ||| ||||| |||||
Sbjct 128613 GTTCTCCATCATGATCTGGA-AACCGTAGAAGCATCGCGCCTCGGGAATCTGGACCTC-G 128556
Query 123026 CCGCAAAATTGTTATTGATA---TTCTCAAAAACAATTCCATCGGACCCAGCAAAGAATG 123082
|| | ||| | | || | ||||| ||||| || ||||| | || || || |
Sbjct 128555 CCAGAGAATCG--CTCGACAAGGTTCTCGTTGACAATGCCGTCGGATGCGGCGAAAAAGG 128498
Query 123083 CCAGGATGTACTTTATGAATTTCTTTTCATTTTCATTCA---GGGTCTTCCAGTCGTCAA 123139
| ||||||| ||||| ||| |||| || || | || | ||||||||| |
Sbjct 128497 CAAGGATGTGGGAGATGAAGAACTTCTCATCATCGTTTAGGCGGTTGCTCCAGTCGTGGA 128438
Query 123140 GATCTTTGGACAAATCAACTTCTTCCGCAGTCCA 123173
|||| ||||| | ||||| || || || |||||
Sbjct 128437 GATCCTTGGAGAGATCAATCTCCTCAGCGGTCCA 128404
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628026151452000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |