Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq434 179 5e-40 seq334 145 9e-30 >seq434 Length=564148 Score = 179 bits (198), Expect = 5e-40 Identities = 1057/1660 (64%), Gaps = 61/1660 (4%) Strand=Plus/Minus Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896 || ||||||||||| || ||||| || || ||||||| || | |||||| || Sbjct 553454 CGAAGGTAGTACATGCCAGTCTTCAGTCCGAGCTTCCAACCAGTAAAATGCATACTGGTA 553395 Query 117897 AACTTGG----AGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGAT 117952 | |||| || ||||| || || ||| || ||||| |||||| || || || Sbjct 553394 ATCTTGCCCATAGTGGGTT---CTCTC-ATGTGGATGTTCAGCGATTGGGACTGGTCAAT 553339 Query 117953 GAAGCGTCCCCGATCCGCCGCCATATCAATCACA--TCCTTCATCTTGATTTCCCACACA 118010 ||| || || || || ||||| | | ||| || | | ||||||||| || Sbjct 553338 GAATGCACCACGGTCAGCGGCCATCTGGACAACAGTTCGCTGAGA--GATTTCCCAAACG 553281 Query 118011 GTCCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCC 118070 ||| ||||||| ||| ||||| | ||| | | | || || || || ||| | || Sbjct 553280 GTCTTGTAGAGAGCCTTTATATCGGCAGGGRTGTT-AGGA-ATGTTC--TGAATCGAACC 553225 Query 118071 GCCTTGACCA-TGAGATCCTTCAT-ATCCTTT--GACCAGAGACCAATCTTTTTGAGATC 118126 ||| | | || ||| | ||| | || || | ||||||||||| || | ||||| Sbjct 553224 GCCCTCAGCAATGATACGGTTCTTCATGCTATCAGACCAGAGACCCATATCAACAAGATC 553165 Query 118127 CTCCACGAGATGCTTA---TTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATA 118183 || ||| | | |||||||| || || || || ||| || | ||| Sbjct 553164 CTT---GAGTAACCAAGGGTTGACAACCTGGAATTCGCCAGCAAGGACACGGCGGGAATA 553108 Query 118184 GATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGC 118243 |||||| | ||||| ||||| ||||| ||||||||||||| ||| |||| || ||| Sbjct 553107 GATATTCGAGGTGTAAGGCTCGAAGCATTCATTGTTACCCAGGATCTGGGAAGTACTGGC 553048 Query 118244 TGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTT 118303 ||| |||||||| || | | | |||||| || | ||| ||| | |||| ||||| Sbjct 553047 TGTAGGCATGGGGGCGACCAACAAGCTGTTGCGTACACCAGTTTGCTTAATTTTCTCCTT 552988 Query 118304 GAGAGCGTC-CCAGTCGTAGTTGAGCTTTGTCTCCC---CCTGCCACATATCAAACTGGA 118359 || || | |||||| || || | | | | | |||||| || | || | Sbjct 552987 TAG-GCTTGTCCAGTCCCAG---AGATCCGACGGGGTGACATTCCACATGTCGTATTGAA 552932 Query 118360 GGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCA 118419 ||||||| || || | || || || ||| | || || || || ||||||| || | Sbjct 552931 GGATACCCTGCGAGACAGGAGAACCTTCATAGGTAGAGTAAGGTCCATCAACCTTGGCAA 552872 Query 118420 ATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCAT-T 118478 || || ||| | ||| || || || ||||| || || || | |||| | Sbjct 552871 TATCCGAAGACGCAGTCAAGGCGGCATGGTAGATTGTCTCGAAGATCTGCTTGTTCAGCT 552812 Query 118479 GCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCT 118538 |||| |||||| || || || | | || | | ||| ||| || ||||| Sbjct 552811 GCCT-GGCCTCTGGTGACTCGAAAGGCATGCGCAGCGCCAGGAATGTATCAGCAAGACCC 552753 Query 118539 TGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCC-ACGGG 118597 || ||||| || ||||| || || |||| ||| || || || || ||| ||||| Sbjct 552752 TGAACACCAAGACCAATGGGACGGTGTCGCATGTTGCTGTTACGGGCC-TCTGGGACGGG 552694 Query 118598 ATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATG 118657 || | || || || | || || || || | ||| || | || | ||||| Sbjct 552693 GTAGTAGTTGACGTCAATGATTCTGTTCAGGTTGTGAACGACGACTTGAGTAACCTCATG 552634 Query 118658 AAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGG----GCGA 118713 | ||| | | | ||| | | | ||| | || | || || | || || || | Sbjct 552633 CAACTTCTGGAAGTCATAGGTTCC---CTCGTTATAGTCA-ACGAATGACGGCAACGCAA 552578 Query 118714 TTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGC 118773 || |||| || || |||| ||| || ||| |||||| || || || |||| Sbjct 552577 GGGAAGCCAAGTTGCAAACAGCCACCTCGTCAGGGGCAGAGTACTCGATGATCTCAGTGC 552518 Query 118774 ACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCAT 118833 | | ||| || || ||| || || | |||||| || || ||| ||| || || Sbjct 552517 AGAGGTTCGAGCTGCGAATAGTACCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGAT 552458 Query 118834 CCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA 118893 |||||||||||||| | || | || ||||| || || | | |||||| || | ||| | Sbjct 552457 CCTTGTAAAGCATGAAGGGGTTTCCAGTCTCAGTCTGAGCTTCGAGAATGGCATACCACA 552398 Query 118894 -CATCGGCAGCTGGCACAG-TGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAG 118951 | || | || | ||||| | | || |||||| | |||||||| ||| || Sbjct 552397 GCTTCTGAGCCTTAATCTTCTGGCG--GCCACGACCCTCTGCTTCGTACTTCTCGTACAG 552340 Query 118952 GGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGG-CAGAAGA 119010 ||| |||||||| || || | | || | || || || || || |||| || | || Sbjct 552339 GGCCTCAAACTCGTCGCCATAGACATCGGCTAGGCCAGG-GCATTCGTTGGGGCACATGA 552281 Query 119011 GAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCG 119070 | | ||| | ||| || ||| || ||||||||||||||||| || ||||| || ||| Sbjct 552280 GGGTCCACTCGCCATTCTTCTCGACACGCTTCATGAAGAGGTCGGGAATCCAAAGAGCCA 552221 Query 119071 AGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGT 119130 ||| ||||| || || ||||||| | || || || || | |||| || | Sbjct 552220 GGAAAAGATCACGGGCACGGACTTCTTCCTTGCCGTGGTTCTTTCGAAGGTCCAGGAACT 552161 Query 119131 CCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC---CCTTACGACGA 119186 | | | ||||| |||||| || || || || | || | | ||| || | | Sbjct 552160 CGAAAACATCCGAGTGCCAAGGCTCGAGATAGATGGCAAAAGCACCAGGTCTCTTGTTG- 552102 Query 119187 CCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCA 119246 ||| |||||| ||| || || |||||| || || ||||| ||||| || | ||||| Sbjct 552101 CCACCCTGGTCTACGTATCTAGCAGTGTTATTGAAGACACGGAGCATGGGTACAATACCG 552042 Query 119247 TCGGATTGGCCATTTGTCCCCCGAA--TACGAGACTTATTGGCTCTGACATCGTGGATGT 119304 | || ||| || || || || || ||| | | || | | |||||||| Sbjct 552041 TTCGAGGTGCCGTTAGTGCCGGCAATGTATGAGCC--GGTAGCGCGAATGCGGTGGATGT 551984 Query 119305 GCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGA 119364 | ||||||||| || ||| ||| ||||| ||||| | | || || |||||| Sbjct 551983 TGAGACCAATACCACCGGCCATCTTGGAGATCATGGCGCAGGTCTTAAGGGTGTCGTAGA 551924 Query 119365 TCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGG 119424 | || || || ||| |||| | | | |||||||||| || | |||| | || Sbjct 551923 TACCCTCAATGCTGTCGTCCTTCATGTCAACGAGGAAGCAGGATGAGAGCTGAGCCTGGG 551864 Query 119425 GTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAA 119464 |||| ||||| |||||||||||||| | || ||| |||| Sbjct 551863 GTGTTCCAGCATTGAAGAGAGTTGGGGAGGCATGGGTGAA 551824 >seq334 Length=652976 Score = 145 bits (160), Expect = 9e-30 Identities = 346/514 (67%), Gaps = 17/514 (3%) Strand=Plus/Minus Query 130027 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 130086 |||||||||||||||||| |||||||| || || |||||| ||| || ||||||||||| Sbjct 128910 GTGGAGACCCTCGTCACGCGAGATGAGCTCGTTAGAGAAGGTCAGGCCGGGCATGAGACC 128851 Query 130087 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 130146 |||||||| | |||||| || | || | || ||||||||| ||||| || Sbjct 128850 ACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCGCTGAAGAAGATGCCCTCGACGGC 128791 Query 130147 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACT--TTGT-ATCAAACCACTTCAT 130203 || || || | | ||||| || |||| ||||| |||| | | | ||| | || Sbjct 128790 GGCAAAGGCGATCAAACGCTGGGCGAAGG---TGGACTTCTTGTCAGCGATCCAGTGCAG 128734 Query 130204 CGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTT 130263 ||||| | |||||| | ||| || |||| ||| | ||| || | ||||| | | Sbjct 128733 GGCCCAGTCCGCCTTCCTGCGGATGCAAGGGATGGTGTCGATGGCGTTGAAGAGATGGGT 128674 Query 130264 CTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCATGGAC 130323 ||| | | || || |||||||| | || ||||| || || || ||| |||| Sbjct 128673 CTTCTGGGCGGGCTCCTTGATGTATGTGTCAATGAGGAGAGAGTAGGTCTCGGAGTGGAT 128614 Query 130324 CAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCAT 130382 | | ||| || | ||| | ||||||| | ||||| ||| ||||| ||||| Sbjct 128613 GTTCTCCATCAT-GATCTGGAAACCGTAGAAGCATCGCGCCTCGGGAATCTGGACCTCGC 128555 Query 130383 CTGCAAAATTGTTATTGATA---TTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACG 130439 | | | ||| | | || | ||||| ||||| || ||||| | || ||||| | Sbjct 128554 CAG-AGAATCG--CTCGACAAGGTTCTCGTTGACAATGCCGTCGGATGCGGCGAAAAAGG 128498 Query 130440 CCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCAA 130496 | ||||| | ||||| || |||| ||||| | || | ||||||||| | Sbjct 128497 CAAGGATGTGGGAGATGAAGAACTTCTCATCATCGTTTAGGCGGTTGCTCCAGTCGTGGA 128438 Query 130497 GATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530 ||||||| |||||||| | |||||| || ||||| Sbjct 128437 GATCCTTGGAGAGATCAATCTCCTCAGCGGTCCA 128404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618429440822200