Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq434 230 3e-55 seq334 149 7e-31 >seq434 Length=564148 Score = 230 bits (254), Expect = 3e-55 Identities = 664/994 (67%), Gaps = 22/994 (2%) Strand=Plus/Plus Query 104616 TCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAG 104675 ||||||| ||||| |||||| ||||| | | |||||||| || | || ||||| | Sbjct 552128 TCTATCTCGAGCCTTGGCACTCGGATGTTTTCGAGTTCCTGGACCTTCGAAAGAACCACG 552187 Query 104676 GTGACGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCA 104735 | | || || | || ||| ||||| ||| ||||| |||||||| || ||||||| Sbjct 552188 GCAAGGAAGAAGTCCGTGCCCGTGATCTTTTCCTGGCTCTTTGGATTCCCGACCTCTTCA 552247 Query 104736 TGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCTGGT 104794 ||||| | || ||| ||| |||| | ||| | ||| | || || || || || ||||| Sbjct 552248 TGAAGCGTGTCGAGAAGAATGGCGAGTGGACCCTCATGTGCCCCAACGAATGC-CCTGGC 552306 Query 104795 CTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGT 104854 || |||||| | || || |||||||| ||||| ||| |||||||| | ||| ||| Sbjct 552307 CTAGCCGATGTCTATGGCGACGAGTTTGAGGCCCTGTACGAGAAGTACGAAGCAGAGGGT 552366 Query 104855 CGGGCGACTGC-GACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAA 104912 || | | | | || | | ||| | || | ||||| | || |||||| | |||| | Sbjct 552367 CGTG-GCCGCCAGAAGATTAAGGCT-CAGAAGCTGTGGTATGCCATTCTCGAAGCTCAGA 552424 Query 104913 CCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAA 104972 | |||||||| | || | |||||||||||| || ||| |||| ||||| || || | Sbjct 552425 CTGAGACTGGAAACCCCTTCATGCTTTACAAGGATCACTGCAACCGCAAGAGCAACCAGA 552484 Query 104973 AGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACA 105032 |||| | ||| || || || || ||||| || || ||| | || | | | | Sbjct 552485 AGAACCTTGGTACTATTCGCAGCTCGAACCTCTGCACTGAGATCATCGAGTACTCTGCCC 552544 Query 105033 AAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAG 105092 || ||| |||||| || ||| | || || | || | || | || || | | Sbjct 552545 CTGACGAGGTGGCTGTTTGCAACTTGGCTTCCCTTGCGTTGCCGTCATTCGTTGA-CTAT 552603 Query 105093 AGACAAAG--ACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAA 105150 | || | | || | ||| | | || | || || ||||| || ||| | || Sbjct 552604 A-ACGAGGGAACCTATGACTTCCAGAAGTTGCATGAGGTTACTCAAGTCGTCGTTCACAA 552662 Query 105151 CCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT-TGAGACTGCTCGTAAATCTAATA 105209 ||| |||||| | ||||| || | |||||||| ||| || ||||| || | Sbjct 552663 CCTGAACAGAATCATTGACGTCAACTACTACCCCGTCCCAGA-GGCCCGTAACAGCAACA 552721 Query 105210 TGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCAT-TCTTTGT 105268 || |||||||||| |||||||| |||||||||||||| || ||| |||| | | || Sbjct 552722 TGCGACACCGTCCCATTGGTCTTGGTGTTCAGGGTCTTGCTGATACATTCCTGGCGCTG- 552780 Query 105269 CGCCACGCATTT-GATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCAT 105327 || || || ||| || || || || | | | | || || || || ||||| || Sbjct 552781 CG-CATGCCTTTCGAGTCACCAGAGGCCAGGCAGCTGAACAAGCAGATCTTCGAGACAAT 552839 Query 105328 GTATCACGCCGCTCTTGA-GGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAA 105386 || || ||||| ||||| ||| ||| || | || |||||||||| || || | Sbjct 552840 CTACCATGCCGC-CTTGACTGCGTCTTCGGATATTGCCAAGGTTGATGGACCTTACTCTA 552898 Query 105387 CCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGA 105446 ||| ||| |||||||| | || || || | ||||||| || |||| |||| || | Sbjct 552899 CCTATGAAGGTTCTCCTGTCTCGCAGGGTATCCTTCAATACGACATGT-GGAATGTCACC 552957 Query 105447 CC-AAGCTTCACTACGACTGG-GAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCG 105504 || | || || |||||| |||| || ||||| || ||| | | ||| | || Sbjct 552958 CCGTCGGATCTCTGGGACTGGACAAGC-CTAAAGGAGAAAATTAAGCAAACTGGTGTACG 553016 Query 105505 TAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAA 105564 ||||| | | | || || ||||| |||||| || | || ||| ||||||| || Sbjct 553017 CAACAGCTTGTTGGTCGCCCCCATGCCTACAGCCAGTACTTCCCAGATCCTGGGTAACAA 553076 Query 105565 TGAATGCTTTGAACCCTACACGACGAACATCTAT 105598 ||||||||| || || ||||| |||| |||||| Sbjct 553077 TGAATGCTTCGAGCCTTACACCTCGAATATCTAT 553110 >seq334 Length=652976 Score = 149 bits (164), Expect = 7e-31 Identities = 349/515 (68%), Gaps = 19/515 (4%) Strand=Plus/Plus Query 94441 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGACTC---TAAAT 94497 ||||| ||||| ||| | |||||||| |||||| | |||| |||| | | |||| Sbjct 128404 TGGACCGCTGAGGAGATTGATCTCTCCAAGGATCTCCACGACTGGAGCAACCGCCTAAAC 128463 Query 94498 GAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGATCCGATGGAATT 94557 || |||| ||| ||||| ||||||| || || || || | |||||| || ||| Sbjct 128464 GATGATGAGAAGTTCTTCATCTCCCACATCCTTGCCTTTTTCGCCGCATCCGACGGCATT 128523 Query 94558 GTTTTTGAGAA---TATCAATAACAACTTTGCTGATGAGGTGCA-ATCCTCTGAAGCGAG 94613 || ||||| | || | | | | | ||| ||||| || || | | || ||| | Sbjct 128524 GTCAACGAGAACCTTGTCGAG--CGATTCT-CTGGCGAGGTCCAGATTCCC-GAGGCGCG 128579 Query 94614 ATCCTTCTATGCGTATCAGTGTCATAATGAA-ATGGTGCATGGGGAGACATACAGTAAAC 94672 || |||||| | | ||| |||| ||| | | | || ||||| ||| | | Sbjct 128580 ATGCTTCTACGGTTTCCAGA-TCATGATGGAGAACATCCACTCCGAGACCTACTCTCTCC 128638 Query 94673 TCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAAA 94732 |||| |||| || || ||||| || |||||| || ||||| | |||||| | | Sbjct 128639 TCATTGACACATACATCAAGGAGCCCGCCCAGAAGACCCATCTCTTCAACGCCATCGACA 128698 Query 94733 CAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAA--AGT 94789 | | || || || | | ||| ||||| ||||| || | ||| | | | |||| ||| Sbjct 128699 CCATCCCTTGCATCCGCAGGAAGGCGGACTGGGCCCTGCACTGGATCGCTGACAAGAAGT 128758 Query 94790 CGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 94849 | |||| || |||| | |||| ||||| || ||||| ||||||||| | Sbjct 128759 CCA---CCTTCGCCCAGCGTTTGATCGCCTTTGCCGCCGTCGAGGGCATCTTCTTCAGCG 128815 Query 94850 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 94909 || ||||| | | || | |||||||||||||| ||||||||||| || || ||||| Sbjct 128816 GTGCCTTCGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGCCTGACCTTCT 128875 Query 94910 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944 | |||||||| ||||| ||||||||||| |||||| Sbjct 128876 CTAACGAGCTCATCTCGCGTGACGAGGGTCTCCAC 128910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583255368383800