Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02-
23] 745 sequences; 39,901,278 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq434 230 3e-55
seq334 149 7e-31
>seq434
Length=564148
Score = 230 bits (254), Expect = 3e-55
Identities = 664/994 (67%), Gaps = 22/994 (2%)
Strand=Plus/Plus
Query 104616 TCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAG 104675
||||||| ||||| |||||| ||||| | | |||||||| || | || ||||| |
Sbjct 552128 TCTATCTCGAGCCTTGGCACTCGGATGTTTTCGAGTTCCTGGACCTTCGAAAGAACCACG 552187
Query 104676 GTGACGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCA 104735
| | || || | || ||| ||||| ||| ||||| |||||||| || |||||||
Sbjct 552188 GCAAGGAAGAAGTCCGTGCCCGTGATCTTTTCCTGGCTCTTTGGATTCCCGACCTCTTCA 552247
Query 104736 TGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCTGGT 104794
||||| | || ||| ||| |||| | ||| | ||| | || || || || || |||||
Sbjct 552248 TGAAGCGTGTCGAGAAGAATGGCGAGTGGACCCTCATGTGCCCCAACGAATGC-CCTGGC 552306
Query 104795 CTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGT 104854
|| |||||| | || || |||||||| ||||| ||| |||||||| | ||| |||
Sbjct 552307 CTAGCCGATGTCTATGGCGACGAGTTTGAGGCCCTGTACGAGAAGTACGAAGCAGAGGGT 552366
Query 104855 CGGGCGACTGC-GACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAA 104912
|| | | | | || | | ||| | || | ||||| | || |||||| | |||| |
Sbjct 552367 CGTG-GCCGCCAGAAGATTAAGGCT-CAGAAGCTGTGGTATGCCATTCTCGAAGCTCAGA 552424
Query 104913 CCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAA 104972
| |||||||| | || | |||||||||||| || ||| |||| ||||| || || |
Sbjct 552425 CTGAGACTGGAAACCCCTTCATGCTTTACAAGGATCACTGCAACCGCAAGAGCAACCAGA 552484
Query 104973 AGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACA 105032
|||| | ||| || || || || ||||| || || ||| | || | | | |
Sbjct 552485 AGAACCTTGGTACTATTCGCAGCTCGAACCTCTGCACTGAGATCATCGAGTACTCTGCCC 552544
Query 105033 AAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAG 105092
|| ||| |||||| || ||| | || || | || | || | || || | |
Sbjct 552545 CTGACGAGGTGGCTGTTTGCAACTTGGCTTCCCTTGCGTTGCCGTCATTCGTTGA-CTAT 552603
Query 105093 AGACAAAG--ACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAA 105150
| || | | || | ||| | | || | || || ||||| || ||| | ||
Sbjct 552604 A-ACGAGGGAACCTATGACTTCCAGAAGTTGCATGAGGTTACTCAAGTCGTCGTTCACAA 552662
Query 105151 CCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT-TGAGACTGCTCGTAAATCTAATA 105209
||| |||||| | ||||| || | |||||||| ||| || ||||| || |
Sbjct 552663 CCTGAACAGAATCATTGACGTCAACTACTACCCCGTCCCAGA-GGCCCGTAACAGCAACA 552721
Query 105210 TGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCAT-TCTTTGT 105268
|| |||||||||| |||||||| |||||||||||||| || ||| |||| | | ||
Sbjct 552722 TGCGACACCGTCCCATTGGTCTTGGTGTTCAGGGTCTTGCTGATACATTCCTGGCGCTG- 552780
Query 105269 CGCCACGCATTT-GATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCAT 105327
|| || || ||| || || || || | | | | || || || || ||||| ||
Sbjct 552781 CG-CATGCCTTTCGAGTCACCAGAGGCCAGGCAGCTGAACAAGCAGATCTTCGAGACAAT 552839
Query 105328 GTATCACGCCGCTCTTGA-GGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAA 105386
|| || ||||| ||||| ||| ||| || | || |||||||||| || || |
Sbjct 552840 CTACCATGCCGC-CTTGACTGCGTCTTCGGATATTGCCAAGGTTGATGGACCTTACTCTA 552898
Query 105387 CCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGA 105446
||| ||| |||||||| | || || || | ||||||| || |||| |||| || |
Sbjct 552899 CCTATGAAGGTTCTCCTGTCTCGCAGGGTATCCTTCAATACGACATGT-GGAATGTCACC 552957
Query 105447 CC-AAGCTTCACTACGACTGG-GAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCG 105504
|| | || || |||||| |||| || ||||| || ||| | | ||| | ||
Sbjct 552958 CCGTCGGATCTCTGGGACTGGACAAGC-CTAAAGGAGAAAATTAAGCAAACTGGTGTACG 553016
Query 105505 TAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAA 105564
||||| | | | || || ||||| |||||| || | || ||| ||||||| ||
Sbjct 553017 CAACAGCTTGTTGGTCGCCCCCATGCCTACAGCCAGTACTTCCCAGATCCTGGGTAACAA 553076
Query 105565 TGAATGCTTTGAACCCTACACGACGAACATCTAT 105598
||||||||| || || ||||| |||| ||||||
Sbjct 553077 TGAATGCTTCGAGCCTTACACCTCGAATATCTAT 553110
>seq334
Length=652976
Score = 149 bits (164), Expect = 7e-31
Identities = 349/515 (68%), Gaps = 19/515 (4%)
Strand=Plus/Plus
Query 94441 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGACTC---TAAAT 94497
||||| ||||| ||| | |||||||| |||||| | |||| |||| | | ||||
Sbjct 128404 TGGACCGCTGAGGAGATTGATCTCTCCAAGGATCTCCACGACTGGAGCAACCGCCTAAAC 128463
Query 94498 GAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGATCCGATGGAATT 94557
|| |||| ||| ||||| ||||||| || || || || | |||||| || |||
Sbjct 128464 GATGATGAGAAGTTCTTCATCTCCCACATCCTTGCCTTTTTCGCCGCATCCGACGGCATT 128523
Query 94558 GTTTTTGAGAA---TATCAATAACAACTTTGCTGATGAGGTGCA-ATCCTCTGAAGCGAG 94613
|| ||||| | || | | | | | ||| ||||| || || | | || ||| |
Sbjct 128524 GTCAACGAGAACCTTGTCGAG--CGATTCT-CTGGCGAGGTCCAGATTCCC-GAGGCGCG 128579
Query 94614 ATCCTTCTATGCGTATCAGTGTCATAATGAA-ATGGTGCATGGGGAGACATACAGTAAAC 94672
|| |||||| | | ||| |||| ||| | | | || ||||| ||| | |
Sbjct 128580 ATGCTTCTACGGTTTCCAGA-TCATGATGGAGAACATCCACTCCGAGACCTACTCTCTCC 128638
Query 94673 TCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAAA 94732
|||| |||| || || ||||| || |||||| || ||||| | |||||| | |
Sbjct 128639 TCATTGACACATACATCAAGGAGCCCGCCCAGAAGACCCATCTCTTCAACGCCATCGACA 128698
Query 94733 CAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAA--AGT 94789
| | || || || | | ||| ||||| ||||| || | ||| | | | |||| |||
Sbjct 128699 CCATCCCTTGCATCCGCAGGAAGGCGGACTGGGCCCTGCACTGGATCGCTGACAAGAAGT 128758
Query 94790 CGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 94849
| |||| || |||| | |||| ||||| || ||||| ||||||||| |
Sbjct 128759 CCA---CCTTCGCCCAGCGTTTGATCGCCTTTGCCGCCGTCGAGGGCATCTTCTTCAGCG 128815
Query 94850 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 94909
|| ||||| | | || | |||||||||||||| ||||||||||| || || |||||
Sbjct 128816 GTGCCTTCGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGCCTGACCTTCT 128875
Query 94910 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944
| |||||||| ||||| ||||||||||| ||||||
Sbjct 128876 CTAACGAGCTCATCTCGCGTGACGAGGGTCTCCAC 128910
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583255368383800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |