Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq116 226 9e-54 seq698 134 4e-26 seq723 109 2e-18 seq737 102 2e-16 >seq116 Length=170512 Score = 226 bits (250), Expect = 9e-54 Identities = 925/1452 (64%), Gaps = 16/1452 (1%) Strand=Plus/Minus Query 349197 CCGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATC 349256 |||| | ||||| || || || || || || || ||||| | || | | | |||| | Sbjct 99035 CCGCAGTCGGAATTGACTTGGGCACGACCTACTCGTGTGTAGGCGTCTTCCGAGATGACC 98976 Query 349257 GTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTA 349316 | | ||||| ||||| ||||| || |||||| | || || || || | ||| || || | Sbjct 98975 GAATCGAAATCATTGCCAATGACCAGGGTAACCGGACCACCCCGTCCTTCGTGGCCTTCA 98916 Query 349317 CCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAA 349376 | || || ||||| |||| |||||| | || || || || | || || || | | Sbjct 98915 CGGACACGGAGCGACTGATCGGTGATGCCGCCAAGAACCAGGTCGCCATGAACCCCCACA 98856 Query 349377 ATACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGAC----AAATCTACA 349432 | || || || || |||||||| || ||||| ||| || || ||| || | | Sbjct 98855 ACACCGTCTTCGACGCTAAGCGTCTGATTGGCCGAAAGTTCTCCGACCCCGAAGT----A 98800 Query 349433 CAATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATT 349492 || | || | || || || || || | || || | |||| || || || || Sbjct 98799 CAGGCCGACATGAAGCACTTCCCCTTCAAGGTCATTG-ACAAGAA--TGGCAAGCCTATC 98743 Query 349493 ATTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATG 349552 || |||||||| || || || || | || ||||| ||||| || || || || ||| Sbjct 98742 ATCGAGGTTGAGTACAAGGGCGAGAAGAAGCAATTCACCCCCGAGGAGATCTCCTCCATG 98683 Query 349553 GTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCT 349612 || | || |||||||| | ||| || | ||| |||||| || || ||| | || Sbjct 98682 GTCCTGACCAAGATGAAGGAGACTGCCGAGTCGTATCTAGGTGGTACCGTCACTAACGCC 98623 Query 349613 GTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGC 349672 || || || || || || || || || || | ||||| || || || || || || Sbjct 98622 GTCATCACCGTCCCGGCTTACTTCAACGACTCTCAGCGACAAGCCACCAAGGACGCAGGT 98563 Query 349673 AGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCA 349732 |||||| || | || || || ||||| || || || ||||| ||||| || ||||| Sbjct 98562 CTCATTGCTGGCCTGAACGTCCTCAGAATCATCAACGAGCCCACGGCTGCCGCCATTGCC 98503 Query 349733 TATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGT 349792 || || ||||| || | | || || ||| | || || || ||| | |||||| Sbjct 98502 TACGGTCTTGACAAGAAGGCCGAGGGTGAGCGAAACGTGCTCATCTTCGATCTCGGTGGT 98443 Query 349793 GGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACT 349852 ||||| || ||||| || || ||||| | || ||||| || || || || || | || Sbjct 98442 GGTACCTTCGATGTCTCTCTCCTAACCATCGAGGAGGGTATCTTCGAGGTCAAGTCCACC 98383 Query 349853 GCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTT 349912 |||||||| || || | ||||| || || || || || || || || || || || Sbjct 98382 GCTGGTGACACTCACTTGGGTGGTGAGGACTTCGACAACCGACTAGTCAACCACTTCGTC 98323 Query 349913 AAAGAATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCG 349971 || || || ||||| ||||| || | || | || || | || |||| || Sbjct 98322 AACGAGTTCAAGCG-CAAGCACAAGAAGGACCTGTCCACCAACGCTCGTGCTCTGCGCCG 98264 Query 349972 CCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTAT 350031 || |||| || ||||| ||||| ||||| || | || || || | || |||||||| Sbjct 98263 TCTCCGAACCGCCTGTGAGCGTGCCAAGCGCACCCTCTCTTCCTCTGCACAGACCTCTAT 98204 Query 350032 TGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTT 350091 || || || ||||| || || | || |||| |||| || || |||||| | || Sbjct 98203 CGAGATCGACTCTCTATTCGAGGGTATCGACTTCTACACATCCATCACCCGTGCTAGATT 98144 Query 350092 TGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAA 350151 || || | || ||| || || || | || || | ||||| || || | Sbjct 98143 CGAGGAGCTGTGCCAGGACCTCTTCCGATCCACCATCCAGCCTGTCGACCGCGTCCTCGC 98084 Query 350152 AGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACG 350211 || || || || ||| ||| | | || | || | || ||||| || || || Sbjct 98083 TGACGCCAAGATCGACAAGTCCCAGGTCCACGAGATCGTCCTTGTCGGTGGCTCCACCCG 98024 Query 350212 TATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATC 350271 ||| || | || || | | | || | || || ||||| || || || ||| Sbjct 98023 TATCCCCCGCATCCAGAAGCTCATCACCGACTACTTCAACGGCAAGGAGCCCAATAAATC 97964 Query 350272 AATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGG 350331 || || || ||||| ||||| || || |||||||| || ||||| |||| | ||||| Sbjct 97963 CATCAACCCCGATGAGGCTGTCGCCTACGGTGCTGCCGTCCAGGCCGCTATCCTGTCTGG 97904 Query 350332 AAATAAGAGTTCTAA---AATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGCT 350388 | | || || || | | || | | || || ||||| | || || || || Sbjct 97903 TGACACCAGCTCCAAGTCGACCAACGAGATCCTGCTTCTCGATGTCGCCCCGCTGTCTCT 97844 Query 350389 TGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACC 350448 || | || ||| |||||| | ||||| || || || | || | || | || Sbjct 97843 CGGTATCGAGACTGCTGGTGGTATGATGACCAAGCTCATCCCCCGCAACACCACCATCCC 97784 Query 350449 TACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCA 350508 || || ||||| | || || || || | || || ||||| | || || || Sbjct 97783 CACCAAGAAGTCGGAGGTCTTCTCCACCTTCTCCGACAACCAGCCTGGTGTGCTTATCCA 97724 Query 350509 AGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCT 350568 ||| | || ||||| ||| ||||| || || || || ||| || | || || Sbjct 97723 AGTCTACGAGGGTGAGCGTCAACGCACCAAGGACAACAACCTACTCGGCAAGTTCGAGCT 97664 Query 350569 AAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGA 350628 | || || || || || | || || ||||| ||||| ||| | |||||| |||| Sbjct 97663 TACTGGCATCCCGCCTGCACCCCGTGGTGTCCCTCAAATTGAGGTCACCTTCGATCTTGA 97604 Query 350629 TTCAAATGGTAT 350640 | | || ||||| Sbjct 97603 TGCCAACGGTAT 97592 >seq698 Length=460427 Score = 134 bits (148), Expect = 4e-26 Identities = 173/236 (73%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||||| || ||||| | | ||||| | || || |||||||| || || || || | Sbjct 204040 TTTACTGTCCTCCACGGAGACGGAGAACCAAGTGGAGCGTAGACTCCTTCTGGATGTTGT 203981 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || | || || || || || || || |||||||| ||||| |||||||| |||| Sbjct 203980 AGTCGCTCAGAGTGCGACCGTCCTCCAGCTGCTTTCCAGCGAAGATGAGACGTTGTTGAT 203921 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGAT 140681 |||||||||| ||||| || |||||||| || ||| || || || || || | || || Sbjct 203920 CAGGAGGAATGCCTTCCTTGTCCTGAATCTT-GCTCTTCACGTTGTCGATGGTGTCGGAA 203862 Query 140682 GGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | ||||||||| || |||| |||||| || || | ||| || ||||| || ||||| Sbjct 203861 GATTCAACTTCGAGGGTAATTGTCTTCCCCGTCAATGTCTTGACAAAGATTTGCAT 203806 Score = 132 bits (146), Expect = 1e-25 Identities = 170/233 (73%), Gaps = 1/233 (0%) Strand=Plus/Minus Query 140495 ACTAATATTTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTG 140554 || ||||||| |||||||||||| | | || || || |||||||| || || || || Sbjct 203591 ACGAATATTTG-CATACCACCACGGAGACGGAGGACGAGGTGAAGAGTGGATTCCTTCTG 203533 Query 140555 AATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACG 140614 || || || || |||| ||||| ||||| ||||| || || || || ||||| | || Sbjct 203532 GATGTTGTAGTCGGATAGGGTTCGGCCATCCTCAAGCTGCTTGCCGGCGAAGATCAATCG 203473 Query 140615 TTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGA 140674 ||||| ||||||||||| || || || |||||||| || | || ||||| || || | Sbjct 203472 CTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCGATGGT 203413 Query 140675 ATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAA 140727 || || | || || || | || | ||||||||||| || || ||||||| Sbjct 203412 GTCGGACGACTCGACCTCCAAGGTGATGGTCTTTCCGGTAAGGGTCTTTACAA 203360 Score = 111 bits (122), Expect = 5e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| |||||||| | | || ||||| || ||||| ||| || || || || || || Sbjct 203291 CATGCCACCACGCAGACGGAGGACAAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTC 203232 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || ||||||||||| ||||| || || || | || || || ||||| Sbjct 203231 GGAAAGAGTGCGACCGTCTTCAAGTTGCTTTCCGGCGAAAATCAATCGCTGTTGGTCAGG 203172 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || || || || ||||| || || | || || || || || | ||| || | ||| Sbjct 203171 GGGGATGCCCTCCTTGTCCTGGATCTTCGACTTAACGTTGTCGATGGTATCCGAGGATTC 203112 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| || | ||||| ||||| || || || || || |||||||| Sbjct 203111 GACCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 203061 >seq723 Length=1045888 Score = 109 bits (120), Expect = 2e-18 Identities = 481/741 (65%), Gaps = 29/741 (4%) Strand=Plus/Minus Query 349610 GCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCT 349669 ||||| || || || || ||||| || || || ||| ||| || || || || ||| Sbjct 639701 GCTGTCATCACCGTGCCTGCCTACTTCAACGACAACCAACGTCAAGCCACCAAGGACGCT 639642 Query 349670 GGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATT 349729 || ||| ||||| | || || || | || ||||| || |||||||| || || || Sbjct 639641 GGTTCCATCTCGGGGCTGAACGTGCTCCGTATCATTAACGAGCCCACTGCCGCTGCTATC 639582 Query 349730 GCATATGGGCTTGA-TAAAATGAGTG-ACCAAGaaaaa-aaTATTCTTATTTTTGATTTA 349786 || ||||| | | | || ||| | |||| | ||| | || || | ||| | Sbjct 639581 GCCTATGGTTTGGGCTCCAACAAGTCCAGCAAGGAGCGCAATGTGCTCATCTACGATCTT 639522 Query 349787 GGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAA 349846 |||||||| ||||| ||||| || || || || | | | || | ||| ||||| Sbjct 639521 GGTGGTGGCACTTTCGATGTGTCCCTCCTTACCATCCAGGGTGGTGTCTTTACTGTTAAG 639462 Query 349847 GCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCAT 349906 || || || |||||||| ||||||||||| ||||||| |||| || || ||| Sbjct 639461 GCCACCGCCGGTGATACCCATCTTGGTGGTCAAGATTTCGATACCAACCTTCTTGAGCAC 639402 Query 349907 TTTGTTAAAGAATTTAAGCGTCAAG-CTAAAATTGATAT---TGGAGATAATCCTAGAGC 349962 | || || || |||| |||| | |||| || || ||| | | || |||| Sbjct 639401 TGCAAGAAGGAGTTCCAGCG-CAAGACCAAAAAGGACATCTCTGGCG---ACCCGCGAGC 639346 Query 349963 AATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTAC--TACC 350020 | || | || ||||||| || || ||||| ||| | || | || | || | || Sbjct 639345 TCTCCGAAGACTCCGAACTGCTTGCGAGCGTGCCAAGAGAACCCTCTC--CAACGGTGCC 639288 Query 350021 CAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTT--TTCATCTATTA 350078 || ||| | || || ||||| || ||| ||||||| | |||||||| | || || | Sbjct 639287 CAGACCACCATCGAGATTGACTCGCTTTTTGATGGCGAGGATTTCTTCCTCCA--AATCA 639230 Query 350079 CACGTGCTCGGTTTGAAGAATT--ATG-TATGGATCTTTTTAGAGCAACAATGGATCCTG 350135 | |||||||| || || || | | | | || | ||| | || || |||| |||| Sbjct 639229 CCCGTGCTCGTTTCGAGGACCTGAACGCCAAGG--CCTTTAATGGC-ACTTTGGAGCCTG 639173 Query 350136 TGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAG 350195 | | | || | || ||||| | | || | | ||||||| | || | | Sbjct 639172 TTGCTCAGGTTCTTAAGGATGCTCAGGTTGAGAAGAGTGCCGTTGATGAGATTGTGCTCG 639113 Query 350196 TTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCA 350255 | ||||| ||||| ||||| || || | || || | || || || || || | || Sbjct 639112 TCGGTGGATCTACCCGTATCCCCAAGATCCAGAAGCTTCTCTCCGACTTCTTCGACGG-T 639054 Query 350256 AAGAACCTTCTAGATCA--ATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCA 350313 ||||| | || ||| | || || || || ||||| ||||| || |||||||||||||| Sbjct 639053 AAGAAGC-TCGAGAAGAGCATCAACCCTGACGAAGCCGTTGCCTACGGTGCTGCTGTTCA 638995 Query 350314 GGCATCTATTTTATCTGGAAA 350334 ||| ||| | ||||| || Sbjct 638994 GGCTGGTATCCTCTCTGGCAA 638974 Score = 93.3 bits (102), Expect = 1e-13 Identities = 187/276 (68%), Gaps = 6/276 (2%) Strand=Plus/Plus Query 378201 ATCTTCTAATGCTTTAATAAGTCGTCGAGAAATATAACCAGTTTGACTAGTTTTAACTGC 378260 |||||| | |||||| | ||| ||||| || ||||| |||| | || || || || Sbjct 693424 ATCTTCAAGTGCTTTGACAAGACGTCGTTGGATGTAACCGGTTTCAGCCGTCTTGACGGC 693483 Query 378261 AGTATCAATTAAACCAACACGACCACCCATTGCATGGAAGAATAATTCAGTAGGAGTAAG 378320 ||||||||||| ||| | |||||| |||| || |||||||| || || ||||| || | Sbjct 693484 AGTATCAATTAGACCCTCGCGACCAGCCATGGCGTGGAAGAAGAACTCCGTAGGTGTTAA 693543 Query 378321 TCCACCAATAAATGAACTCTCAATAAATCCTCTTGCGCCTGGCGAATCATCATATTTTGT 378380 |||| | | || | || | || || | || | || || | ||||| || || Sbjct 693544 ACCACGTAGGTAGGAGTTTTCGACGAAGCCACGGGCCTCAGGTGAGTAATCATCCTTGGT 693603 Query 378381 ATAATGAGGTAATGTACGATTCTCAAACCCATATGGAATTCGTTTTCCATCAACATTCTG 378440 | | || |||| || |||| || || || | ||||| ||||| || || || |||| Sbjct 693604 AAAGTGTGGTAGAGTTCGATACTTGAAACCGAAGGGAATACGTTTGCCTTCGACGATCTG 693663 Query 378441 TTGAC---CAAGTGCAGAAACCATTTGAGCAATATT 378473 || | |||| |||| ||| |||| ||| || Sbjct 693664 CTGGCCGACAAGAGCAG---TCATCTGAGAAATGTT 693696 Score = 91.5 bits (100), Expect = 4e-13 Identities = 101/134 (75%), Gaps = 3/134 (2%) Strand=Plus/Plus Query 377458 CGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTA 377517 || || |||||| | || || || ||| | |||| ||||| |||||||| ||||| Sbjct 692657 CGGGGGACACCAAGGGTGACGTT---TTTGGCAGCAATACCAGTGAAGTGGAAGGTATTT 692713 Query 377518 AGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCT 377577 ||||| | || || | |||||||||||||||||||| || | || ||||||||||| Sbjct 692714 AGAGTCATCTGCGTCGCAGGCTCACCAATTGACTGCGCAGCCAATACACCAACCATTTCG 692773 Query 377578 CCAGGATTGACAAT 377591 ||||| || || || Sbjct 692774 CCAGGGTTCACCAT 692787 >seq737 Length=337091 Score = 102 bits (112), Expect = 2e-16 Identities = 155/221 (70%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 140508 ATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCA 140567 ||||||||||| | | || || || || ||||| ||||| || || || || || || Sbjct 284525 ATACCACCACGGAGACGGAGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCG 284584 Query 140568 GATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGA 140627 || | ||||| || || || ||||| || || || ||||| ||||| || || || || Sbjct 284585 GAAAGAGTTCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCGGGG 284644 Query 140628 GGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCA 140687 || || || || || ||||||||||| | || ||||| || || | || || | || Sbjct 284645 GGGATGCCCTCCTTGTCCTGAATTTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCC 284704 Query 140688 ACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAA 140728 || || || || | ||||| || || || || || || || Sbjct 284705 ACCTCGAGGGTGATAGTCTTACCCGTAAGGGTCTTCACGAA 284745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515239936423235