Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq434 244 1e-59 seq334 143 3e-29 seq735 89.7 6e-13 >seq434 Length=564148 Score = 244 bits (270), Expect = 1e-59 Identities = 462/675 (68%), Gaps = 6/675 (1%) Strand=Plus/Plus Query 53267 AAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATG 53326 || ||||| || || ||| | ||||| || ||||| ||||| || || ||||| | Sbjct 551818 AAATACTTCACCCATGCCTCCCCAACTCTCTTCAATGCTGGAACACCCCAGGCTCAGCTC 551877 Query 53327 TCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTC 53386 || ||||||||| || | |||||||| ||| || || || |||||||| || || Sbjct 551878 TCATCCTGCTTCCTCGTTGACATGAAGGACGACAGCATTGAGGGTATCTACGACACCCTT 551937 Query 53387 AAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCACTGCTCGAACG-- 53444 ||| || ||| ||||||||| | | |||||||| ||| || || || | || Sbjct 551938 AAGACCTGCGCCATGATCTCCAAGATGGCCGGTGGTATTGGTCTCAACA--TCCACCGCA 551995 Query 53445 TCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTA 53504 | || || | |||| || || || || |||||| | | | || || || || | Sbjct 551996 TTCGCGCTACCGGCTCATACATTGCCGGCACTAACGGCACCTCGAACGGTATTGTACCCA 552055 Query 53505 TGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCGCAAGG 53564 ||||||| |||||||| ||||| || | ||||| |||||||||| ||| | | Sbjct 552056 TGCTCCGTGTCTTCAATAACACTGCTAGATACGTAGACCAGGGTGGCAACAAGAGACCTG 552115 Query 53565 GGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGC 53624 | | || |||||||| |||||||| |||||| | || || | ||||| || || || | Sbjct 552116 GTGCTTTTGCCATCTATCTCGAGCCTTGGCACTCGGATGTTTTCGAGTTCCTGGACCTTC 552175 Query 53625 GTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTACAGCTCTGTGGATTC 53684 | ||| || || | ||||| | || |||||| || || ||||| ||||||| Sbjct 552176 GAAAGAACCACGGCAAGGAAGAAGTCCGTGCCCGTGATCTTTTCCTGGCTCTTTGGATTC 552235 Query 53685 CGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTGATGTGCCCGAACG 53744 | |||||||||||| | || |||||| | | |||||| ||| |||||||| |||| Sbjct 552236 CCGACCTCTTCATGAAGCGTGTCGAGAAGAATGGCGAGTGGACCCTCATGTGCCCCAACG 552295 Query 53745 AGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAGATGTATCGGACGTACG 53804 | ||||| ||||| | |||||| || || |||||| | | |||| || ||||| Sbjct 552296 AATGCCCTGGCCTAGCCGATGTCTATGGCGACGAGTTTGAGGCCCTGTACGAGAAGTACG 552355 Query 53805 CAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGGTATGGGATGCAATCCTCA 53864 || |||| || | ||||| | ||||| | || | ||| |||| || ||| Sbjct 552356 AAGCAGAGGGTCGTGGCCGCCAGAAGATTAAGGCTCAGAAGCTGTGGTATGCCATTCTCG 552415 Query 53865 AGAGC-CAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGATTCGGTCAACGAGAAG 53923 | ||| ||| ||||| |||| || | |||| ||||||||| |||| ||| Sbjct 552416 A-AGCTCAGACTGAGACTGGAAACCCCTTCATGCTTTACAAGGATCACTGCAACCGCAAG 552474 Query 53924 AGCAACCAGAAGAAC 53938 ||||||||||||||| Sbjct 552475 AGCAACCAGAAGAAC 552489 Score = 87.8 bits (96), Expect = 2e-12 Identities = 106/139 (76%), Gaps = 4/139 (3%) Strand=Plus/Plus Query 55787 GCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATG-GAGAATCC 55845 ||||| |||||||| | ||| ||||||||||| || ||||||||| |||| ||||| || Sbjct 553321 GCTGACCGTGGTGCATTCATTGACCAGTCCCAATCGCTGAACATCCACATGAGAGAA-CC 553379 Query 55846 TTCACTGGCCAAGTTGAGCTCGATGCACTTTTAC-GGGTGGAAGAAGGGACTCAAGACGG 55904 | ||| |||| | | | ||||| |||||| || |||||| ||||| ||||| | Sbjct 553380 CACTATGGGCAAGATTACCAGTATGCA-TTTTACTGGTTGGAAGCTCGGACTGAAGACTG 553438 Query 55905 GTATGTACTATCTGCGGAC 55923 | |||||||| || || || Sbjct 553439 GCATGTACTACCTTCGTAC 553457 >seq334 Length=652976 Score = 143 bits (158), Expect = 3e-29 Identities = 476/727 (65%), Gaps = 25/727 (3%) Strand=Plus/Minus Query 74463 TAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTTCTCCATC 74522 || || ||||| ||||| || || ||||||||||| || | | |||||||||||||| Sbjct 129209 TAGTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTCCATG 129150 Query 74523 CAGTCGAAAGGGTTCTTTGCACCGTAAATAGGCTTCTCCCCAAACTGTGC---CATGAGG 74579 ||||||| ||||| | || | ||| | |||||| | | || || || Sbjct 129149 AAGTCGAAGGGGTTTGTGGCGCGGTACAC---CTTCTCGTTACCGAGGGCGACCAATAGA 129093 Query 74580 CGATCCGCCACAAATTGAATGTACTGCGTCATTTCTCCCGCATCCATGCCGATGAGTTTG 74639 || || || || || | ||||||||| |||| || | |||||||| || | Sbjct 129092 CGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTTGGCGTTCATGCCGAGTAGGGCG 129033 Query 74640 CACGGCAGTGCCTCGGTGATAAACTCACTCTCCACCTCGCAAGCCCAT-TG-GACAATCT 74697 || ||||||||||| || | || || ||| | | || | ||| || || |||| Sbjct 129032 CAGGGCAGTGCCTCCGTCAAGAATTCCTGCTCGA--TGGCGACGGCATCTGTGATGATCT 128975 Query 74698 TGTGAATG---TCTTTGGAAGGGCACTTTTCCCTCAGGTGAGAGTAAAGC-GTCACGGCA 74753 | || | | || ||| |||| || | | ||||| ||| | || | || ||| Sbjct 128974 TCTGGACGACATCCTTGCCGGGGCGGTTGT---TGAGGTGCGAGAACAGTAGGCA-GGCG 128919 Query 74754 AACTCCTGATGCGAG-CCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGG 74812 || || || ||| || || || | || | || || || || | ||||| || Sbjct 128918 AAGTCGGTGTG-GAGACCCTCGTCACGCGAGATGAGCTCGTTAGAGAAGGTCAGGCCGGG 128860 Query 74813 CATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCC 74872 ||| || ||||||||||| | ||| ||||||| ||||| ||| |||||||||||||| Sbjct 128859 CATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCGCTGAAGAAGATGCC 128800 Query 74873 TTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCA----TCGGAAGTCATCC 74928 ||||| |||||||||| | || || ||||| |||| | | | || |||| Sbjct 128799 CTCGACGGCGGCAAAGGCGATCAAACGCTGGGCGAA-GGTGGACTTCTTGTCAGCGATCC 128741 Query 74929 AAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTGGAAGA 74988 | | | ||||| || || || | || ||||| || ||||| || | ||||| Sbjct 128740 AGTGCAGGGCCCAGTCCGCCTTCCTGCGGATGCAAGGGATGGTGTCGATGGCGTTGAAGA 128681 Query 74989 GGCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCG 75048 | | ||||| |||| ||||||| | ||||||| | || ||||| ||||| | Sbjct 128680 GATGGGTCTTCTGGGCGGGCTCCTTGATGTATGTGTCAATGAGGAGAGAGTAGGTCTCGG 128621 Query 75049 AATGAATCGACTCGTTGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTA 75108 | || || ||| | | |||| | ||||||| | |||||||| | |||||| | Sbjct 128620 AGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGCGCCTCGGGAATCTGGA 128561 Query 75109 CATCCTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAA 75168 | || || || | | | | ||||| |||| |||||||| || |||||||||| Sbjct 128560 CCTCGCCAGAGAATCGCTCGACAAGGTTCTCGTTGACAATGCCGTCGGATGCGGCGAAAA 128501 Query 75169 AAGCCAG 75175 | || || Sbjct 128500 AGGCAAG 128494 >seq735 Length=540243 Score = 89.7 bits (98), Expect = 6e-13 Identities = 202/301 (67%), Gaps = 2/301 (1%) Strand=Plus/Minus Query 152025 ACGCGTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAA 152084 ||| ||| ||| ||||| | ||| || || || |||||||| || || | || || Sbjct 479665 ACGAGTGTGGATATATCGAGCGCTAGCAGCGTCTGAACCACCTGCAAGTCGAGAACCGAA 479606 Query 152085 CTGTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATT 152144 | || ||| || ||| ||| | |||||||| ||| || || ||||| || | | Sbjct 479605 GTTACCGCTGGGTTCCAGGCAGTTTACGTTGTTGGAGCCGACAAAGTTCTGTGCTAGACC 479546 Query 152145 CACAATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTA 152204 | || || ||||||| |||||||||| ||||| || ||||| || | || || Sbjct 479545 AATGATAGTTTGCTGCAGAGATACTTCACCGTGATGATAAGCTGTCTGTTCAGAGACATA 479486 Query 152205 TCCCGCCAACTGCGCCACCTTCATGTCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAAT 152264 || ||||| | |||||| |||| | || || ||| ||||| ||||| || Sbjct 479485 ACCAGCCAATTCGATGACCTTCTTGTCTTTGACCAAATTGCGCTTCAGACAAGCGTAGAT 479426 Query 152265 CACCTTGCGCTGGGATGGTTTCAAACCGTCCACCACGTGA-GGAATCGAACGCTTGATGT 152323 ||||||||||| || || | ||| || || || ||| ||||| || ||| | ||| Sbjct 479425 GACCTTGCGCTGACCGGGCTTTAGACCATCAACAAC-TGAGGGAATGGATCGCATATTGT 479367 Query 152324 C 152324 | Sbjct 479366 C 479366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547210904051000