Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02-
23] 745 sequences; 39,901,278 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq434 244 1e-59
seq334 143 3e-29
seq735 89.7 6e-13
>seq434
Length=564148
Score = 244 bits (270), Expect = 1e-59
Identities = 462/675 (68%), Gaps = 6/675 (1%)
Strand=Plus/Plus
Query 53267 AAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATG 53326
|| ||||| || || ||| | ||||| || ||||| ||||| || || ||||| |
Sbjct 551818 AAATACTTCACCCATGCCTCCCCAACTCTCTTCAATGCTGGAACACCCCAGGCTCAGCTC 551877
Query 53327 TCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTC 53386
|| ||||||||| || | |||||||| ||| || || || |||||||| || ||
Sbjct 551878 TCATCCTGCTTCCTCGTTGACATGAAGGACGACAGCATTGAGGGTATCTACGACACCCTT 551937
Query 53387 AAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCACTGCTCGAACG-- 53444
||| || ||| ||||||||| | | |||||||| ||| || || || | ||
Sbjct 551938 AAGACCTGCGCCATGATCTCCAAGATGGCCGGTGGTATTGGTCTCAACA--TCCACCGCA 551995
Query 53445 TCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTA 53504
| || || | |||| || || || || |||||| | | | || || || || |
Sbjct 551996 TTCGCGCTACCGGCTCATACATTGCCGGCACTAACGGCACCTCGAACGGTATTGTACCCA 552055
Query 53505 TGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCGCAAGG 53564
||||||| |||||||| ||||| || | ||||| |||||||||| ||| | |
Sbjct 552056 TGCTCCGTGTCTTCAATAACACTGCTAGATACGTAGACCAGGGTGGCAACAAGAGACCTG 552115
Query 53565 GGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGC 53624
| | || |||||||| |||||||| |||||| | || || | ||||| || || || |
Sbjct 552116 GTGCTTTTGCCATCTATCTCGAGCCTTGGCACTCGGATGTTTTCGAGTTCCTGGACCTTC 552175
Query 53625 GTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTACAGCTCTGTGGATTC 53684
| ||| || || | ||||| | || |||||| || || ||||| |||||||
Sbjct 552176 GAAAGAACCACGGCAAGGAAGAAGTCCGTGCCCGTGATCTTTTCCTGGCTCTTTGGATTC 552235
Query 53685 CGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTGATGTGCCCGAACG 53744
| |||||||||||| | || |||||| | | |||||| ||| |||||||| ||||
Sbjct 552236 CCGACCTCTTCATGAAGCGTGTCGAGAAGAATGGCGAGTGGACCCTCATGTGCCCCAACG 552295
Query 53745 AGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAGATGTATCGGACGTACG 53804
| ||||| ||||| | |||||| || || |||||| | | |||| || |||||
Sbjct 552296 AATGCCCTGGCCTAGCCGATGTCTATGGCGACGAGTTTGAGGCCCTGTACGAGAAGTACG 552355
Query 53805 CAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGGTATGGGATGCAATCCTCA 53864
|| |||| || | ||||| | ||||| | || | ||| |||| || |||
Sbjct 552356 AAGCAGAGGGTCGTGGCCGCCAGAAGATTAAGGCTCAGAAGCTGTGGTATGCCATTCTCG 552415
Query 53865 AGAGC-CAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGATTCGGTCAACGAGAAG 53923
| ||| ||| ||||| |||| || | |||| ||||||||| |||| |||
Sbjct 552416 A-AGCTCAGACTGAGACTGGAAACCCCTTCATGCTTTACAAGGATCACTGCAACCGCAAG 552474
Query 53924 AGCAACCAGAAGAAC 53938
|||||||||||||||
Sbjct 552475 AGCAACCAGAAGAAC 552489
Score = 87.8 bits (96), Expect = 2e-12
Identities = 106/139 (76%), Gaps = 4/139 (3%)
Strand=Plus/Plus
Query 55787 GCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATG-GAGAATCC 55845
||||| |||||||| | ||| ||||||||||| || ||||||||| |||| ||||| ||
Sbjct 553321 GCTGACCGTGGTGCATTCATTGACCAGTCCCAATCGCTGAACATCCACATGAGAGAA-CC 553379
Query 55846 TTCACTGGCCAAGTTGAGCTCGATGCACTTTTAC-GGGTGGAAGAAGGGACTCAAGACGG 55904
| ||| |||| | | | ||||| |||||| || |||||| ||||| ||||| |
Sbjct 553380 CACTATGGGCAAGATTACCAGTATGCA-TTTTACTGGTTGGAAGCTCGGACTGAAGACTG 553438
Query 55905 GTATGTACTATCTGCGGAC 55923
| |||||||| || || ||
Sbjct 553439 GCATGTACTACCTTCGTAC 553457
>seq334
Length=652976
Score = 143 bits (158), Expect = 3e-29
Identities = 476/727 (65%), Gaps = 25/727 (3%)
Strand=Plus/Minus
Query 74463 TAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTTCTCCATC 74522
|| || ||||| ||||| || || ||||||||||| || | | ||||||||||||||
Sbjct 129209 TAGTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTCCATG 129150
Query 74523 CAGTCGAAAGGGTTCTTTGCACCGTAAATAGGCTTCTCCCCAAACTGTGC---CATGAGG 74579
||||||| ||||| | || | ||| | |||||| | | || || ||
Sbjct 129149 AAGTCGAAGGGGTTTGTGGCGCGGTACAC---CTTCTCGTTACCGAGGGCGACCAATAGA 129093
Query 74580 CGATCCGCCACAAATTGAATGTACTGCGTCATTTCTCCCGCATCCATGCCGATGAGTTTG 74639
|| || || || || | ||||||||| |||| || | |||||||| || |
Sbjct 129092 CGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTTGGCGTTCATGCCGAGTAGGGCG 129033
Query 74640 CACGGCAGTGCCTCGGTGATAAACTCACTCTCCACCTCGCAAGCCCAT-TG-GACAATCT 74697
|| ||||||||||| || | || || ||| | | || | ||| || || ||||
Sbjct 129032 CAGGGCAGTGCCTCCGTCAAGAATTCCTGCTCGA--TGGCGACGGCATCTGTGATGATCT 128975
Query 74698 TGTGAATG---TCTTTGGAAGGGCACTTTTCCCTCAGGTGAGAGTAAAGC-GTCACGGCA 74753
| || | | || ||| |||| || | | ||||| ||| | || | || |||
Sbjct 128974 TCTGGACGACATCCTTGCCGGGGCGGTTGT---TGAGGTGCGAGAACAGTAGGCA-GGCG 128919
Query 74754 AACTCCTGATGCGAG-CCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGG 74812
|| || || ||| || || || | || | || || || || | ||||| ||
Sbjct 128918 AAGTCGGTGTG-GAGACCCTCGTCACGCGAGATGAGCTCGTTAGAGAAGGTCAGGCCGGG 128860
Query 74813 CATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCC 74872
||| || ||||||||||| | ||| ||||||| ||||| ||| ||||||||||||||
Sbjct 128859 CATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCGCTGAAGAAGATGCC 128800
Query 74873 TTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCA----TCGGAAGTCATCC 74928
||||| |||||||||| | || || ||||| |||| | | | || ||||
Sbjct 128799 CTCGACGGCGGCAAAGGCGATCAAACGCTGGGCGAA-GGTGGACTTCTTGTCAGCGATCC 128741
Query 74929 AAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTGGAAGA 74988
| | | ||||| || || || | || ||||| || ||||| || | |||||
Sbjct 128740 AGTGCAGGGCCCAGTCCGCCTTCCTGCGGATGCAAGGGATGGTGTCGATGGCGTTGAAGA 128681
Query 74989 GGCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCG 75048
| | ||||| |||| ||||||| | ||||||| | || ||||| ||||| |
Sbjct 128680 GATGGGTCTTCTGGGCGGGCTCCTTGATGTATGTGTCAATGAGGAGAGAGTAGGTCTCGG 128621
Query 75049 AATGAATCGACTCGTTGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTA 75108
| || || ||| | | |||| | ||||||| | |||||||| | |||||| |
Sbjct 128620 AGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGCGCCTCGGGAATCTGGA 128561
Query 75109 CATCCTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAA 75168
| || || || | | | | ||||| |||| |||||||| || ||||||||||
Sbjct 128560 CCTCGCCAGAGAATCGCTCGACAAGGTTCTCGTTGACAATGCCGTCGGATGCGGCGAAAA 128501
Query 75169 AAGCCAG 75175
| || ||
Sbjct 128500 AGGCAAG 128494
>seq735
Length=540243
Score = 89.7 bits (98), Expect = 6e-13
Identities = 202/301 (67%), Gaps = 2/301 (1%)
Strand=Plus/Minus
Query 152025 ACGCGTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAA 152084
||| ||| ||| ||||| | ||| || || || |||||||| || || | || ||
Sbjct 479665 ACGAGTGTGGATATATCGAGCGCTAGCAGCGTCTGAACCACCTGCAAGTCGAGAACCGAA 479606
Query 152085 CTGTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATT 152144
| || ||| || ||| ||| | |||||||| ||| || || ||||| || | |
Sbjct 479605 GTTACCGCTGGGTTCCAGGCAGTTTACGTTGTTGGAGCCGACAAAGTTCTGTGCTAGACC 479546
Query 152145 CACAATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTA 152204
| || || ||||||| |||||||||| ||||| || ||||| || | || ||
Sbjct 479545 AATGATAGTTTGCTGCAGAGATACTTCACCGTGATGATAAGCTGTCTGTTCAGAGACATA 479486
Query 152205 TCCCGCCAACTGCGCCACCTTCATGTCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAAT 152264
|| ||||| | |||||| |||| | || || ||| ||||| ||||| ||
Sbjct 479485 ACCAGCCAATTCGATGACCTTCTTGTCTTTGACCAAATTGCGCTTCAGACAAGCGTAGAT 479426
Query 152265 CACCTTGCGCTGGGATGGTTTCAAACCGTCCACCACGTGA-GGAATCGAACGCTTGATGT 152323
||||||||||| || || | ||| || || || ||| ||||| || ||| | |||
Sbjct 479425 GACCTTGCGCTGACCGGGCTTTAGACCATCAACAAC-TGAGGGAATGGATCGCATATTGT 479367
Query 152324 C 152324
|
Sbjct 479366 C 479366
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547210904051000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |