Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq434 188 8e-43 seq698 170 2e-37 seq737 161 1e-34 seq27 158 1e-33 >seq434 Length=564148 Score = 188 bits (208), Expect = 8e-43 Identities = 788/1235 (64%), Gaps = 29/1235 (2%) Strand=Plus/Minus Query 80541 CCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGG 80600 ||||||||||| || | ||| |||| ||| | ||||| || | | || ||| || Sbjct 552948 CCACATGTCGTATTGAAGGATACCCTGCGAGACAGGAGAACCTTCATAGGTAGAGTAAGG 552889 Query 80601 GCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAA 80660 || || |||||| | || | ||| | | | ||| || || || || ||| || Sbjct 552888 TCCATCAACCTTGGCAATATCCGAAGACGCAGTCAAGGCGGCATGGTAGATTGTCTCGAA 552829 Query 80661 GACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGAA 80720 || |||||||| | |||| ||| ||||| | || || || | || ||| Sbjct 552828 GATCTGCTTGTTCAGCTGCCTGGCCTCTGGTGACTCGAAAGGCATGCGCAGCGCCAGGAA 552769 Query 80721 CACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTT-CGATCGCT 80779 ||||| || |||||||| || | | || || ||||| ||| |||| | | | Sbjct 552768 TGTATCAGCAAGACCCTGAACACCAAGACCAATGGGACGGTGTCGCATGTTGCTGTTAC- 552710 Query 80780 CGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAA 80839 |||||| || | ||||| |||| || |||| | |||||||||| | || | Sbjct 552709 GGGCCTCTGGGACGGGGTAGTAGTTGACGTCAATGATTCTGTTCAGGTTGTGAACGACGA 552650 Query 80840 CCCGTGTAACATCATGAAGTTTCTGAAAGTCGAATTGGTTCCC--------CTTCACAAA 80891 | | ||||| ||||| | ||||| ||||| || ||||||| | || || Sbjct 552649 CTTGAGTAACCTCATGCAACTTCTGGAAGTC--ATAGGTTCCCTCGTTATAGTCAACGAA 552592 Query 80892 TGCCGG-AAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACT 80950 || ||| || || ||||| |||| ||||| || |||||||| |||| | | ||| Sbjct 552591 TGACGGCAACGC-AAGGGAAGCCAAGTTGCAAACAGCCACCTCGTCAGGGGCAGAGTACT 552533 Query 80951 CGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACT 81010 ||| ||| || ||||| | || || ||| ||||| ||||| |||||||| || Sbjct 552532 CGATGATCTCAGTGCAGAGGTTCGAGCTGCGAATAGTACCAAGGTTCTTCTGGTTGCTCT 552473 Query 81011 TGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGA 81070 || |||||| |||||||| |||| | ||| | || ||||| ||| | | || Sbjct 552472 TGCGGTTGCAGTGATCCTTGTAAAGCATGAAGGGGTTTCCAGTCTCAGTCTGAGCTTCGA 552413 Query 81071 GGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACAT 81130 | ||||| | ||| | || | ||||| | | || |||| || || || | | Sbjct 552412 GAATGGCATACCACAGCTTCTGAGCCTTAATCTTCTGGCGGCCACGACCCTCTGCTTCGT 552353 Query 81131 ACTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGT 81190 |||| |||| | || |||| | | || | | || | ||| | ||||| |||| Sbjct 552352 ACTTCTCGTACAGGGCCTCAAACTCGTCGCCATAGACATCGGCTAGGCCAGGGCATTCGT 552293 Query 81191 TAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGA 81250 | |||||||| ||| ||| ||| | ||||| ||| ||||||||| ||| || | Sbjct 552292 TGGGGCACATGAGGGTCCACTCGCCATTCTTCTCGACACGCTTCATGAAGAGGTCGGGAA 552233 Query 81251 TCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCA 81310 |||| || || ||| || || ||| || | || || | || ||||| || | Sbjct 552232 TCCAAAGAGCCAGGAAAAGATCACGGGCACGGACTTCTTCCTTGCCGTGGTTCTTTCGAA 552173 Query 81311 ACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCG-AC--- 81366 || || || || | | |||| ||||| ||||| ||||| | ||| | | || Sbjct 552172 GGTCCAGGAACTCGAAAACATCCGAGTGCCAAGGCTCGAGATAGATGGCAAAAGCACCAG 552113 Query 81367 --CCCTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACA 81424 | |||| ||||||||||| ||||| | ||||| || || ||||| | || Sbjct 552112 GTCTCTTG---TTGCCACCCTGGTCTACGTATCTAGCAGTGTTATTGAAGACACGGAGCA 552056 Query 81425 TAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCA 81484 | || | ||||| | || ||||| || || | || || || | ||||| | Sbjct 552055 TGGGTACAATACCGTTCGAGGTGCCGTTAGTGCCGGCAATGTATGAGCCGGTAGCGCGAA 551996 Query 81485 CCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCA 81544 | ||| ||||| || ||||| | | ||| || ||| || || || | Sbjct 551995 TGCGGTGGATGTTGAGACCAATACCACCGGCCATCTTGGAGATCATGGCGCAGGTCTTAA 551936 Query 81545 TGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACA 81604 ||| || || || ||||| ||||| || | |||||||||| | ||| ||| ||| | Sbjct 551935 GGGTGTCGTAGATACCCTCAATGCTGTCGTCCTTCATGTCAACGAGGAAGCAGGATGAGA 551876 Query 81605 TCTGAG---GGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAAC 81661 ||||| || | || || |||||||| || ||||||| || || |||| || Sbjct 551875 GCTGAGCCTGGGGTGTT---CCAGCATTGAAGAGAGTTGGGGAGGCATGGGTGAAGTATT 551819 Query 81662 GGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGA 81721 | | ||||| |||| |||||| | | || | ||| ||||| || |||| Sbjct 551818 TGCTGGACATGAGGTTATAGGTCTGTATAACCTTCTCCACATCATCACCCCAGATGCCGA 551759 Query 81722 TAGCTACACGCATAAACATGTACTGGGGCGTCTCG 81756 ||| |||||||| | ||||| ||| || ||||| Sbjct 551758 CAGCCACACGCATGATCATGTGCTGCGGTCTCTCG 551724 >seq698 Length=460427 Score = 170 bits (188), Expect = 2e-37 Identities = 168/217 (77%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 27416 TTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTG 27475 |||| ||||| |||||||| ||||| || || | ||||| ||||| || | ||| | Sbjct 203360 TTGTAAAGACCCTTACCGGAAAGACCATCACCTTGGAGGTCGAGTCGTCCGACACCATCG 203419 Query 27476 CAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAA 27535 ||| | ||| | || ||||||||||||||||| |||||||| ||||||||||| | | Sbjct 203420 ACAATGTCAAGTCGAAGATTCAGGACAAGGAGGGCATTCCTCCTGACCAGCAGCGATTGA 203479 Query 27536 TTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGG 27595 | || || || ||||| || ||||||| || |||||| | ||||| || |||| |||| Sbjct 203480 TCTTCGCCGGCAAGCAGCTTGAGGATGGCCGAACCCTATCCGACTACAACATCCAGAAGG 203539 Query 27596 AATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||||||||||| || ||| | ||||| || ||||| Sbjct 203540 AATCCACTCTTCACCTCGTCCTCCGTCTCCGTGGTGG 203576 Score = 152 bits (168), Expect = 6e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || ||||||||||| || ||||||||||| || || Sbjct 203061 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTCGAATCCTCG 203120 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | || | ||| | || || |||||||||||||| || || || ||||| Sbjct 203121 GATACCATCGACAACGTTAAGTCGAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAA 203180 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | ||||| || || |||||||| || || | ||| || || | ||||| || Sbjct 203181 CAGCGATTGATTTTCGCCGGAAAGCAACTTGAAGACGGTCGCACTCTTTCCGACTACAAC 203240 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| |||||| || || ||| | ||||| || ||||| Sbjct 203241 ATCCAGAAGGAGAGCACTCTCCACCTTGTCCTCCGTCTGCGTGGTGG 203287 Score = 140 bits (154), Expect = 4e-28 Identities = 171/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||||||||| | || || ||||| ||||| || || ||||| || Sbjct 203806 ATGCAAATCTTTGTCAAGACATTGACGGGGAAGACAATTACCCTCGAAGTTGAATCTTCC 203865 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || ||||| || |||||||||||||| || |||||||| || || Sbjct 203866 GACACCATCGACAACGTGAAGAGCAAGATTCAGGACAAGGAAGGCATTCCTCCTGATCAA 203925 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 || ||||| || || ||||| ||||| || ||||| | ||| || || ||| ||||| || Sbjct 203926 CAACGTCTCATCTTCGCTGGAAAGCAGCTGGAGGACGGTCGCACTCTGAGC-GACTACAA 203984 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 |||| ||||| || || || || | || | ||||| || || ||||| Sbjct 203985 CATCCAGAAGGAGTCTACGCTCCACTTGGTTCTCCGTCTCCGTGGAGGACA 204035 Score = 129 bits (142), Expect = 7e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || || ||||| || || |||||||| || || |||||||| ||||| Sbjct 203578 ATGCAAATATTCGTGAAGACTCTCACTGGCAAGACAATCACCCTTGAGGTGGAGTCTTCG 203637 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | || | || || ||||||||||||||||| || || ||||| Sbjct 203638 GACACGATCGACAACGTCAAATCCAAGATCCAGGACAAGGAGGGAATCCCGCCCGACCAA 203697 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 || || || || ||||| |||||||| | ||||||| || || || ||| ||||| || Sbjct 203698 CAACGACTTATCTTTGCCGGTAAGCAGTTGGAGGATGGCCGAACGCTGAGC-GACTACAA 203756 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| || || || || || || | || ||||||||||| Sbjct 203757 CATTCAGAAGGAGTCGACCCTGCACCTTGTTCTCCGACTTCGCGGTGG 203804 >seq737 Length=337091 Score = 161 bits (178), Expect = 1e-34 Identities = 174/229 (76%), Gaps = 1/229 (0%) Strand=Plus/Minus Query 27405 AATGCAA-ATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAG 27463 ||| ||| | ||| || ||||| ||||| || |||||||| || || ||||| ||||| Sbjct 284756 AATTCAATAGCTTCGTGAAGACCCTTACGGGTAAGACTATCACCCTCGAGGTGGAGTCTT 284697 Query 27464 GTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | ||| | ||| | ||| | |||||||||||||||||||| || || || |||| Sbjct 284696 CCGACACCATCGACAATGTCAAGTCCAAAATTCAGGACAAGGAGGGCATCCCCCCCGACC 284637 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 | |||||||| || || || || |||||||||||||| | || || || | ||||| | Sbjct 284636 AACAGCGTCTGATCTTCGCCGGCAAGCAACTCGAGGACGGCCGAACTCTTTCCGACTACA 284577 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||| ||||| |||||||| || || ||| | ||||| || ||||| Sbjct 284576 ACATCCAGAAGGAGTCCACTCTCCACCTCGTCCTCCGTCTCCGTGGTGG 284528 >seq27 Length=240170 Score = 158 bits (174), Expect = 1e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || ||||| ||||| |||||||| || || ||||||||||| || |||||||| ||||| Sbjct 62394 ATCATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCG 62335 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 | || | ||| | ||| | ||| | || || ||||||||||||||||| || || ||| Sbjct 62334 AGCGACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATCCCCCCCGAC 62275 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 || ||||| || || || || || |||||||||||||| | || || || | ||||| Sbjct 62274 CAACAGCGACTGATCTTCGCCGGCAAGCAACTCGAGGACGGCCGCACTCTCTCCGACTAC 62215 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || |||| ||||| ||| ||||| || || | || || || ||||| Sbjct 62214 AACATCCAGAAGGAGAGCACCCTTCACCTCGTGCTCCGCCTCCGTGGTGG 62165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570305088984400