Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02-
23] 745 sequences; 39,901,278 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq137 86.0 5e-12
>seq137
Length=246627
Score = 86.0 bits (94), Expect = 5e-12
Identities = 143/204 (70%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 29840 GGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTTATCCAGGTAG 29899
||||| || | || || | ||| ||||| |||||| | ||||| | ||| | |||
Sbjct 148051 GGAAACGGCCGTGGTTCTCGCTCAAGCTGGACCTTCAGGGCGTCCACATGATCGACGTAC 148110
Query 29900 ACGTGAGCGTCTCCCAGGTTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGC 29958
||||| ||||| |||| ||| | | ||| || || | || || ||||| ||
Sbjct 148111 ACGTGGGCGTCGCCCATAACGTGTGTTAGGCTC-CCGGGAACCAGATCGCATACGTGCGC 148169
Query 29959 CATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTC 30018
| ||| | ||| || || | ||| || ||||||||||| || || ||||| ||||||||
Sbjct 148170 GAGCATATGCGTCAGCAGCGCGTAACTTGCGATGTTAAATGGGACACCGAGGCCCATGTC 148229
Query 30019 CCCCGACCTCTGGTAGAGCTGACA 30042
| |||| |||||| ||||| ||
Sbjct 148230 GCAGGACCGCTGGTACAGCTGGCA 148253
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406306710828540
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |