Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq137 100 3e-16 >seq137 Length=246627 Score = 100 bits (110), Expect = 3e-16 Identities = 205/298 (69%), Gaps = 10/298 (3%) Strand=Plus/Plus Query 6728 ACGTAGAATTG-GCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGG 6786 |||||||| || ||| | ||||||| || ||||| ||||| ||| |||||||| Sbjct 148318 ACGTAGAACTGCGCAAACA-TGTGGCATGGTGGGAGTACCATCTTCTTGAGGTCCTTCGG 148376 Query 6787 GTTCCACGCGCACATCACGATCCTTCTGTCATCAGG---GTTCCGCTTCAAGGTGTCGAT 6843 |||||||||| | | | || | | ||| | || ||||||| || | | || Sbjct 148377 GTTCCACGCGGATAGGATCATGCGGCGGTCGTACGGATTGTTCCGC---AATTTATGTAT 148433 Query 6844 CACGTACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCG-CTTCGCTCCCCCGATACT 6902 || | || ||||| ||||| || | ||||| | |||||| | || |||| Sbjct 148434 GACATCGGCCAATTGGTCGTAGCCCTGGCCGGTGTAGTCGGTCTTCGCATCAACG-TACT 148492 Query 6903 CCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAG 6962 | || || ||||| | ||||||||| |||||||| ||||| | ||||||| |||| ||| Sbjct 148493 CGGCACCGAAGTGGCGCCACTGGAAGCCGTAGACGGGGCCGAGGTCGCCCACCTCACGAT 148552 Query 6963 ATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCAC 7020 | | || ||||| ||||| || || ||||||| ||||||||||||| || Sbjct 148553 CCGTCAGTCCTAAATTGTCGAGAAACTCGCGCGACCCGTTGCCGTCCCAGATCTTGAC 148610 Score = 100 bits (110), Expect = 3e-16 Identities = 205/298 (69%), Gaps = 10/298 (3%) Strand=Plus/Minus Query 34325 GTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCT 34384 || ||||||||||||| ||||||| || || ||||| ||||| || | | | Sbjct 148610 GTCAAGATCTGGGACGGCAACGGGTCGCGCGAGTTTCTCGACAATTTAGGACTGACGGAT 148551 Query 34385 CGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAG 34444 || |||| ||||||| | ||||| |||||||| ||||||||| | ||||| || || ||| Sbjct 148550 CGTGAGGTGGGCGACCTCGGCCCCGTCTACGGCTTCCAGTGGCGCCACTTCGGTGCCGAG 148491 Query 34445 TATCGGGGGAGCGAAG-CGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGAT 34503 || || | |||||| | ||||| | || ||||| ||||| || | || || Sbjct 148490 TA-CGTTGATGCGAAGACCGACTACACCGGCCAGGGCTACGACCAATTGGCCGATGTCAT 148432 Query 34504 CGACACCTTGAAGCGGAAC---CCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCC 34560 | | || ||||||| || | ||| | | || | | | |||||||||||| Sbjct 148431 ACATAAATT---GCGGAACAATCCGTACGACCGCCGCATGATCCTATCCGCGTGGAACCC 148375 Query 34561 GAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGC-CAATTCTACGT 34617 |||||| ||| ||||| ||||| || ||||||| | ||| || |||||||| Sbjct 148374 GAAGGACCTCAAGAAGATGGTACTCCCACCATGCCACA-TGTTTGCGCAGTTCTACGT 148318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448258225556400