Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02-
23] 745 sequences; 39,901,278 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq137 100 3e-16
>seq137
Length=246627
Score = 100 bits (110), Expect = 3e-16
Identities = 205/298 (69%), Gaps = 10/298 (3%)
Strand=Plus/Plus
Query 6728 ACGTAGAATTG-GCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGG 6786
|||||||| || ||| | ||||||| || ||||| ||||| ||| ||||||||
Sbjct 148318 ACGTAGAACTGCGCAAACA-TGTGGCATGGTGGGAGTACCATCTTCTTGAGGTCCTTCGG 148376
Query 6787 GTTCCACGCGCACATCACGATCCTTCTGTCATCAGG---GTTCCGCTTCAAGGTGTCGAT 6843
|||||||||| | | | || | | ||| | || ||||||| || | | ||
Sbjct 148377 GTTCCACGCGGATAGGATCATGCGGCGGTCGTACGGATTGTTCCGC---AATTTATGTAT 148433
Query 6844 CACGTACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCG-CTTCGCTCCCCCGATACT 6902
|| | || ||||| ||||| || | ||||| | |||||| | || ||||
Sbjct 148434 GACATCGGCCAATTGGTCGTAGCCCTGGCCGGTGTAGTCGGTCTTCGCATCAACG-TACT 148492
Query 6903 CCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAG 6962
| || || ||||| | ||||||||| |||||||| ||||| | ||||||| |||| |||
Sbjct 148493 CGGCACCGAAGTGGCGCCACTGGAAGCCGTAGACGGGGCCGAGGTCGCCCACCTCACGAT 148552
Query 6963 ATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCAC 7020
| | || ||||| ||||| || || ||||||| ||||||||||||| ||
Sbjct 148553 CCGTCAGTCCTAAATTGTCGAGAAACTCGCGCGACCCGTTGCCGTCCCAGATCTTGAC 148610
Score = 100 bits (110), Expect = 3e-16
Identities = 205/298 (69%), Gaps = 10/298 (3%)
Strand=Plus/Minus
Query 34325 GTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCT 34384
|| ||||||||||||| ||||||| || || ||||| ||||| || | | |
Sbjct 148610 GTCAAGATCTGGGACGGCAACGGGTCGCGCGAGTTTCTCGACAATTTAGGACTGACGGAT 148551
Query 34385 CGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAG 34444
|| |||| ||||||| | ||||| |||||||| ||||||||| | ||||| || || |||
Sbjct 148550 CGTGAGGTGGGCGACCTCGGCCCCGTCTACGGCTTCCAGTGGCGCCACTTCGGTGCCGAG 148491
Query 34445 TATCGGGGGAGCGAAG-CGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGAT 34503
|| || | |||||| | ||||| | || ||||| ||||| || | || ||
Sbjct 148490 TA-CGTTGATGCGAAGACCGACTACACCGGCCAGGGCTACGACCAATTGGCCGATGTCAT 148432
Query 34504 CGACACCTTGAAGCGGAAC---CCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCC 34560
| | || ||||||| || | ||| | | || | | | ||||||||||||
Sbjct 148431 ACATAAATT---GCGGAACAATCCGTACGACCGCCGCATGATCCTATCCGCGTGGAACCC 148375
Query 34561 GAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGC-CAATTCTACGT 34617
|||||| ||| ||||| ||||| || ||||||| | ||| || ||||||||
Sbjct 148374 GAAGGACCTCAAGAAGATGGTACTCCCACCATGCCACA-TGTTTGCGCAGTTCTACGT 148318
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448258225556400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |