Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02-
23] 745 sequences; 39,901,278 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq698 167 5e-36
seq737 150 4e-31
seq27 145 2e-29
>seq698
Length=460427
Score = 167 bits (184), Expect = 5e-36
Identities = 166/215 (77%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||||||||| |||||| ||| || |||||||| || || | ||| || | || |||
Sbjct 203272 AGGACAAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGACCGTCT 203213
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| || ||||| || ||||| || | || ||||||||||| || | || |||||||||
Sbjct 203212 TCAAGTTGCTTTCCGGCGAAAATCAATCGCTGTTGGTCAGGGGGGATGCCCTCCTTGTCC 203153
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || ||||| |||||||| || ||| ||| ||||| |||||||| |||
Sbjct 203152 TGGATCTTCGACTTAACGTTGTCGATGGTATCCGAGGATTCGACCTCAAGAGTGATGGTC 203093
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|| || ||||| ||||| || || | |||||| ||
Sbjct 203092 TTGCCGGTGAGGGTCTTGACGAAGATCTGCATCTT 203058
Score = 167 bits (184), Expect = 5e-36
Identities = 158/202 (78%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| |||||||||||||| || || |||||||| || || | ||||| | |||||
Sbjct 203561 AGGACGAGGTGAAGAGTGGATTCCTTCTGGATGTTGTAGTCGGATAGGGTTCGGCCATCC 203502
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| |||||||| | || || ||||||||||||| || |||||||||
Sbjct 203501 TCAAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCC 203442
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| ||||| || || || ||||||||||| || || ||||| | ||||| |||
Sbjct 203441 TGAATCTTCGACTTGACATTGTCGATGGTGTCGGACGACTCGACCTCCAAGGTGATGGTC 203382
Query 211083 TTTCCCGTGAGAGTCTTTACAA 211104
||||| || || ||||||||||
Sbjct 203381 TTTCCGGTAAGGGTCTTTACAA 203360
Score = 165 bits (182), Expect = 2e-35
Identities = 169/221 (76%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953
||||||| || |||||||| || || ||||| || || ||||| || || || ||
Sbjct 203798 CGAAGTCGGAGAACAAGGTGCAGGGTCGACTCCTTCTGAATGTTGTAGTCGCTCAGCGTT 203739
Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013
| ||||| |||| |||||| || || |||||||| ||||||||||| || || | |||
Sbjct 203738 CGGCCATCCTCCAACTGCTTACCGGCAAAGATAAGTCGTTGTTGGTCGGGCGGGATTCCC 203679
Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073
||||||||||||||||| ||| ||||| ||||| ||||| || || ||||| ||
Sbjct 203678 TCCTTGTCCTGGATCTTGGATTTGACGTTGTCGATCGTGTCCGAAGACTCCACCTCAAGG 203619
Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| ||||| || ||||||||||| || || | |||||
Sbjct 203618 GTGATTGTCTTGCCAGTGAGAGTCTTCACGAATATTTGCAT 203578
Score = 163 bits (180), Expect = 7e-35
Identities = 171/225 (76%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949
|| ||| || | || || | ||| || || ||||| || |||||||| || || ||
Sbjct 204030 TCCACGGAGACGGAGAACCAAGTGGAGCGTAGACTCCTTCTGGATGTTGTAGTCGCTCAG 203971
Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009
|| | || || ||||||||||| || |||||||| || |||||||| ||||||||||
Sbjct 203970 AGTGCGACCGTCCTCCAGCTGCTTTCCAGCGAAGATGAGACGTTGTTGATCAGGAGGAAT 203911
Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069
|||||||||||||| ||||| |||||||| ||||||||||| || |||||| ||
Sbjct 203910 GCCTTCCTTGTCCTGAATCTTGCTCTTCACGTTGTCGATGGTGTCGGAAGATTCAACTTC 203851
Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||| || || ||||| ||||| | ||||| ||||| | |||||
Sbjct 203850 GAGGGTAATTGTCTTCCCCGTCAATGTCTTGACAAAGATTTGCAT 203806
>seq737
Length=337091
Score = 150 bits (166), Expect = 4e-31
Identities = 155/203 (76%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| ||||| ||||||||||| || |||||||| || || | ||| || | || ||
Sbjct 284543 AGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCGGCCGTCC 284602
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| || |||||||| |||||||| || || |||||||| || || | || |||||||||
Sbjct 284603 TCGAGTTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCC 284662
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| || || || || || ||||||||||| || || |||||||| ||||| |||
Sbjct 284663 TGAATTTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTC 284722
Query 211083 TTTCCCGTGAGAGTCTTTACAAA 211105
|| ||||| || ||||| || ||
Sbjct 284723 TTACCCGTAAGGGTCTTCACGAA 284745
>seq27
Length=240170
Score = 145 bits (160), Expect = 2e-29
Identities = 162/215 (75%), Gaps = 6/215 (3%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || |||||||| ||| ||| || |||||||| || || | || || | || ||
Sbjct 62180 AGCACGAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCGTCC 62239
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| || |||||||| |||||||| || || |||||||| || || | ||| |||||||||
Sbjct 62240 TCGAGTTGCTTGCCGGCGAAGATCAGTCGCTGTTGGTCGGGGGGGATTCCCTCCTTGTCC 62299
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATC 211079
|||||||| || || || ||||||||||| ||| || ||||| || |||||
Sbjct 62300 TGGATCTTGGACTTGACATTGTCGATGGTGTC---GCTCGACTCCACCTCAAGGGTGATA 62356
Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| |||||||| ||||| || || | ||||||
Sbjct 62357 GTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 62391
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159140935531925
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |