Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq698 167 5e-36 seq737 150 4e-31 seq27 145 2e-29 >seq698 Length=460427 Score = 167 bits (184), Expect = 5e-36 Identities = 166/215 (77%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||||||||| |||||| ||| || |||||||| || || | ||| || | || ||| Sbjct 203272 AGGACAAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGACCGTCT 203213 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || ||||| || ||||| || | || ||||||||||| || | || ||||||||| Sbjct 203212 TCAAGTTGCTTTCCGGCGAAAATCAATCGCTGTTGGTCAGGGGGGATGCCCTCCTTGTCC 203153 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| |||||||| || ||| ||| ||||| |||||||| ||| Sbjct 203152 TGGATCTTCGACTTAACGTTGTCGATGGTATCCGAGGATTCGACCTCAAGAGTGATGGTC 203093 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || || ||||| ||||| || || | |||||| || Sbjct 203092 TTGCCGGTGAGGGTCTTGACGAAGATCTGCATCTT 203058 Score = 167 bits (184), Expect = 5e-36 Identities = 158/202 (78%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| |||||||||||||| || || |||||||| || || | ||||| | ||||| Sbjct 203561 AGGACGAGGTGAAGAGTGGATTCCTTCTGGATGTTGTAGTCGGATAGGGTTCGGCCATCC 203502 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| | || || ||||||||||||| || ||||||||| Sbjct 203501 TCAAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCC 203442 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || || || ||||||||||| || || ||||| | ||||| ||| Sbjct 203441 TGAATCTTCGACTTGACATTGTCGATGGTGTCGGACGACTCGACCTCCAAGGTGATGGTC 203382 Query 211083 TTTCCCGTGAGAGTCTTTACAA 211104 ||||| || || |||||||||| Sbjct 203381 TTTCCGGTAAGGGTCTTTACAA 203360 Score = 165 bits (182), Expect = 2e-35 Identities = 169/221 (76%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||||| || |||||||| || || ||||| || || ||||| || || || || Sbjct 203798 CGAAGTCGGAGAACAAGGTGCAGGGTCGACTCCTTCTGAATGTTGTAGTCGCTCAGCGTT 203739 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | ||||| |||| |||||| || || |||||||| ||||||||||| || || | ||| Sbjct 203738 CGGCCATCCTCCAACTGCTTACCGGCAAAGATAAGTCGTTGTTGGTCGGGCGGGATTCCC 203679 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 ||||||||||||||||| ||| ||||| ||||| ||||| || || ||||| || Sbjct 203678 TCCTTGTCCTGGATCTTGGATTTGACGTTGTCGATCGTGTCCGAAGACTCCACCTCAAGG 203619 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| || ||||||||||| || || | ||||| Sbjct 203618 GTGATTGTCTTGCCAGTGAGAGTCTTCACGAATATTTGCAT 203578 Score = 163 bits (180), Expect = 7e-35 Identities = 171/225 (76%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 || ||| || | || || | ||| || || ||||| || |||||||| || || || Sbjct 204030 TCCACGGAGACGGAGAACCAAGTGGAGCGTAGACTCCTTCTGGATGTTGTAGTCGCTCAG 203971 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009 || | || || ||||||||||| || |||||||| || |||||||| |||||||||| Sbjct 203970 AGTGCGACCGTCCTCCAGCTGCTTTCCAGCGAAGATGAGACGTTGTTGATCAGGAGGAAT 203911 Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069 |||||||||||||| ||||| |||||||| ||||||||||| || |||||| || Sbjct 203910 GCCTTCCTTGTCCTGAATCTTGCTCTTCACGTTGTCGATGGTGTCGGAAGATTCAACTTC 203851 Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||| || || ||||| ||||| | ||||| ||||| | ||||| Sbjct 203850 GAGGGTAATTGTCTTCCCCGTCAATGTCTTGACAAAGATTTGCAT 203806 >seq737 Length=337091 Score = 150 bits (166), Expect = 4e-31 Identities = 155/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| ||||||||||| || |||||||| || || | ||| || | || || Sbjct 284543 AGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCGGCCGTCC 284602 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || |||||||| |||||||| || || |||||||| || || | || ||||||||| Sbjct 284603 TCGAGTTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCC 284662 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || || || || || || ||||||||||| || || |||||||| ||||| ||| Sbjct 284663 TGAATTTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTC 284722 Query 211083 TTTCCCGTGAGAGTCTTTACAAA 211105 || ||||| || ||||| || || Sbjct 284723 TTACCCGTAAGGGTCTTCACGAA 284745 >seq27 Length=240170 Score = 145 bits (160), Expect = 2e-29 Identities = 162/215 (75%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || |||||||| ||| ||| || |||||||| || || | || || | || || Sbjct 62180 AGCACGAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCGTCC 62239 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || |||||||| |||||||| || || |||||||| || || | ||| ||||||||| Sbjct 62240 TCGAGTTGCTTGCCGGCGAAGATCAGTCGCTGTTGGTCGGGGGGGATTCCCTCCTTGTCC 62299 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATC 211079 |||||||| || || || ||||||||||| ||| || ||||| || ||||| Sbjct 62300 TGGATCTTGGACTTGACATTGTCGATGGTGTC---GCTCGACTCCACCTCAAGGGTGATA 62356 Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| |||||||| ||||| || || | |||||| Sbjct 62357 GTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 62391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159140935531925