Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02-
23] 745 sequences; 39,901,278 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq27 93.3 3e-14
seq698 91.5 1e-13
>seq27
Length=240170
Score = 93.3 bits (102), Expect = 3e-14
Identities = 138/193 (72%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || ||||||||||| || || ||||| || || || || || |
Sbjct 62391 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC 62332
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || ||| | || | || || ||||| || || | || || || ||
Sbjct 62331 GACACCATCGACAATGTCAAGTC-CAAGATCCAGGACAAGGAGGGAATCCCCCCCGACCA 62273
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||||| | || || |||||||| ||||| || |||| |||||| | ||| |||||
Sbjct 62272 ACAGCGACTGATCTTCGCCGGCAAGCAACTCGAGGACGGCCGCACTCTCTCCGACTACAA 62213
Query 23790 CATACAAAAAGAG 23802
||| || || |||
Sbjct 62212 CATCCAGAAGGAG 62200
>seq698
Length=460427
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| || || || || || | ||||| || || || || ||||||||||| || |
Sbjct 203806 ATGCAAATCTTTGTCAAGACATTGACGGGGAAGACAATTACCCTCGAAGTTGAATCTTCC 203865
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| | || | | || || ||| ||||| ||||| | || || ||||||
Sbjct 203866 GACACCATCGACAACGTGAAGAGCAAGATTCAGGACAAGGAAGGCATTCCTCCTGATCAA 203925
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|| ||| | || || || || || || ||||| |||| |||||| | |||| ||||||
Sbjct 203926 CAACGTCTCATCTTCGCTGGAAAGCAGCTGGAGGACGGTCGCACTCTGAGCGACTACAAC 203985
Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838
|| || || ||||| || | || || ||| | | | || ||||||
Sbjct 203986 ATCCAGAAGGAGTCTACGCTCCACTTGGTTCTCCGTCTCCGTGGAGGA 204033
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338006530978460
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |