Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02-
23] 745 sequences; 39,901,278 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq698 147 5e-30
seq737 138 3e-27
seq27 122 2e-22
seq434 86.0 1e-11
>seq698
Length=460427
Score = 147 bits (162), Expect = 5e-30
Identities = 165/221 (75%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
||||||| || |||||||| || || || || || || | ||||| ||| || |||
Sbjct 203798 CGAAGTCGGAGAACAAGGTGCAGGGTCGACTCCTTCTGAATGTTGTAGTCGCTCAGCGTT 203739
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
| ||||| || | |||||| || || |||||||||||||||||||||||||| || ||
Sbjct 203738 CGGCCATCCTCCAACTGCTTACCGGCAAAGATAAGTCGTTGTTGGTCGGGCGGGATTCCC 203679
Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672
|||||||| |||||||| || || ||||| ||||| || | ||||| || |
Sbjct 203678 TCCTTGTCCTGGATCTTGGATTTGACGTTGTCGATCGTGTCCGAAGACTCCACCTCAAGG 203619
Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| |||||||| || | ||| || | ||| | ||||||
Sbjct 203618 GTGATTGTCTTGCCAGTGAGAGTCTTCACGAATATTTGCAT 203578
Score = 140 bits (154), Expect = 8e-28
Identities = 158/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || | |||||| || || || || |||| ||||| ||| || ||| | || ||
Sbjct 204017 AGAACCAAGTGGAGCGTAGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGACCGTCC 203958
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| ||||||||||| || |||||||| || || ||||| |||||||||||
Sbjct 203957 TCCAGCTGCTTTCCAGCGAAGATGAGACGTTGTTGATCAGGAGGAATGCCTTCCTTGTCC 203898
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|| ||||| |||||| ||||||||||| || | ||| || || | || || |||
Sbjct 203897 TGAATCTTGCTCTTCACGTTGTCGATGGTGTCGGAAGATTCAACTTCGAGGGTAATTGTC 203838
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| |||||||| || || | || | ||||||
Sbjct 203837 TTCCCCGTCAATGTCTTGACAAAGATTTGCAT 203806
Score = 138 bits (152), Expect = 3e-27
Identities = 150/199 (75%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| ||||| ||||||||||| || |||| ||||| |||| | |||| |||||
Sbjct 203561 AGGACGAGGTGAAGAGTGGATTCCTTCTGGATGTTGTAGTCGGATAGGGTTCGGCCATCC 203502
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || |||||||| | ||| || ||||| || ||||| || ||||||||
Sbjct 203501 TCAAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCC 203442
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|| ||||| ||| ||| ||||||||||| || | || || || || ||||| |||
Sbjct 203441 TGAATCTTCGACTTGACATTGTCGATGGTGTCGGACGACTCGACCTCCAAGGTGATGGTC 203382
Query 225682 TTGCCCGTCAAAGTTTTTA 225700
|| || || | || ||||
Sbjct 203381 TTTCCGGTAAGGGTCTTTA 203363
Score = 131 bits (144), Expect = 4e-25
Identities = 158/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|||||||||||||||||| || || |||| ||||| |||| | ||| | || |||
Sbjct 203272 AGGACAAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGACCGTCT 203213
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| || ||||| || ||||| || | ||| |||||||| || || || || ||||||||
Sbjct 203212 TCAAGTTGCTTTCCGGCGAAAATCAATCGCTGTTGGTCAGGGGGGATGCCCTCCTTGTCC 203153
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| || |||||||| || |||| ||| || || | ||||| |||
Sbjct 203152 TGGATCTTCGACTTAACGTTGTCGATGGTATCCGAGGATTCGACCTCAAGAGTGATGGTC 203093
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||| || | || || | ||| | ||||| ||
Sbjct 203092 TTGCCGGTGAGGGTCTTGACGAAGATCTGCATCTT 203058
>seq737
Length=337091
Score = 138 bits (152), Expect = 3e-27
Identities = 161/216 (75%), Gaps = 1/216 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| |||||||||||||| || || |||| ||||| |||| | ||||| || ||
Sbjct 284543 AGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCGGCCGTCC 284602
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| || ||||| || |||||||| || || ||||||||||| || || || ||||||||
Sbjct 284603 TCGAGTTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCC 284662
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|| || || ||| ||| ||||||||||| || | ||||| || | ||||| |||
Sbjct 284663 TGAATTTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTC 284722
Query 225682 TTGCCCGTCAAAGTTTTTATGAA-CACTTGCATTTT 225716
|| ||||| | || || | ||| | ||| |||||
Sbjct 284723 TTACCCGTAAGGGTCTTCACGAAGCTATTGAATTTT 284758
>seq27
Length=240170
Score = 122 bits (134), Expect = 2e-22
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || ||||| || ||| || || |||| ||||| |||| | ||| | || ||
Sbjct 62180 AGCACGAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCGTCC 62239
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| || ||||| || |||||||| ||||| ||||||||||| || || || ||||||||
Sbjct 62240 TCGAGTTGCTTGCCGGCGAAGATCAGTCGCTGTTGGTCGGGGGGGATTCCCTCCTTGTCC 62299
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| ||| ||||||||||| | ||||| || | ||||| |||
Sbjct 62300 TGGATCTTGGACTTGACATTGTCGATGGTGTCGCTCGACTCCACCTCAAGGGTGATAGTC 62359
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|||||||| | || || | ||| | |||||
Sbjct 62360 TTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 62391
>seq434
Length=564148
Score = 86.0 bits (94), Expect = 1e-11
Identities = 186/276 (67%), Gaps = 8/276 (3%)
Strand=Plus/Minus
Query 193500 TTCTGGTTGTTCTTTCGACAGATGGCGTCTTTGTAGACGATGAAGGGCATGCCCACCTCC 193559
||||||||| |||| || | | || ||||| | |||||||| | || |||
Sbjct 552485 TTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAAAGCATGAAGGGGTTTCCAGTCTCA 552426
Query 193560 GCTTGAGCGACGAGAATGTGATGCCAAAGTTCTTGAGCTTTCACTGTCGTTCTGGCCTTT 193619
| ||||| |||||||| || ||| || | ||||| || | || |||||||
Sbjct 552425 GTCTGAGCTTCGAGAATGGCATACCACAGCTTCTGAGCCTTAA---TC-TTCTGGCGGCC 552370
Query 193620 CCTTCCCTCT----CGTACTTTTCGTACAGTTCCTCAAAATCTTGTCCGTAGATTTCGTC 193675
| |||||| ||||||| |||||||| ||||||| || | || |||| ||| |
Sbjct 552369 ACGACCCTCTGCTTCGTACTTCTCGTACAGGGCCTCAAACTCGTCGCCATAGACATCGGC 552310
Query 193676 GAGACCGGGAGCTTCCTTTGGGCAAAAGAGACTCCAATCTCCATCACTTTCCACCCTCTT 193735
|| || || ||| || ||||| | ||| |||| || |||| | || || | |||
Sbjct 552309 TAGGCCAGGGCATTCGTTGGGGCACATGAGGGTCCACTCGCCATTCTTCTCGACACGCTT 552250
Query 193736 CATGAAGAGGTCAGATGTCCAAATGGCGTAGAAAAG 193771
|||||||||||| | |||||| || ||||||
Sbjct 552249 CATGAAGAGGTCGGGAATCCAAAGAGCCAGGAAAAG 552214
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192519816917030
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |