Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq698 147 5e-30 seq737 138 3e-27 seq27 122 2e-22 seq434 86.0 1e-11 >seq698 Length=460427 Score = 147 bits (162), Expect = 5e-30 Identities = 165/221 (75%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||||| || |||||||| || || || || || || | ||||| ||| || ||| Sbjct 203798 CGAAGTCGGAGAACAAGGTGCAGGGTCGACTCCTTCTGAATGTTGTAGTCGCTCAGCGTT 203739 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | ||||| || | |||||| || || |||||||||||||||||||||||||| || || Sbjct 203738 CGGCCATCCTCCAACTGCTTACCGGCAAAGATAAGTCGTTGTTGGTCGGGCGGGATTCCC 203679 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 |||||||| |||||||| || || ||||| ||||| || | ||||| || | Sbjct 203678 TCCTTGTCCTGGATCTTGGATTTGACGTTGTCGATCGTGTCCGAAGACTCCACCTCAAGG 203619 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||||||| || | ||| || | ||| | |||||| Sbjct 203618 GTGATTGTCTTGCCAGTGAGAGTCTTCACGAATATTTGCAT 203578 Score = 140 bits (154), Expect = 8e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | |||||| || || || || |||| ||||| ||| || ||| | || || Sbjct 204017 AGAACCAAGTGGAGCGTAGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGACCGTCC 203958 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| || |||||||| || || ||||| ||||||||||| Sbjct 203957 TCCAGCTGCTTTCCAGCGAAGATGAGACGTTGTTGATCAGGAGGAATGCCTTCCTTGTCC 203898 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| |||||| ||||||||||| || | ||| || || | || || ||| Sbjct 203897 TGAATCTTGCTCTTCACGTTGTCGATGGTGTCGGAAGATTCAACTTCGAGGGTAATTGTC 203838 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || |||||||| || || | || | |||||| Sbjct 203837 TTCCCCGTCAATGTCTTGACAAAGATTTGCAT 203806 Score = 138 bits (152), Expect = 3e-27 Identities = 150/199 (75%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| ||||||||||| || |||| ||||| |||| | |||| ||||| Sbjct 203561 AGGACGAGGTGAAGAGTGGATTCCTTCTGGATGTTGTAGTCGGATAGGGTTCGGCCATCC 203502 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| | ||| || ||||| || ||||| || |||||||| Sbjct 203501 TCAAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCC 203442 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||| ||| ||||||||||| || | || || || || ||||| ||| Sbjct 203441 TGAATCTTCGACTTGACATTGTCGATGGTGTCGGACGACTCGACCTCCAAGGTGATGGTC 203382 Query 225682 TTGCCCGTCAAAGTTTTTA 225700 || || || | || |||| Sbjct 203381 TTTCCGGTAAGGGTCTTTA 203363 Score = 131 bits (144), Expect = 4e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 |||||||||||||||||| || || |||| ||||| |||| | ||| | || ||| Sbjct 203272 AGGACAAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGACCGTCT 203213 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || ||||| || ||||| || | ||| |||||||| || || || || |||||||| Sbjct 203212 TCAAGTTGCTTTCCGGCGAAAATCAATCGCTGTTGGTCAGGGGGGATGCCCTCCTTGTCC 203153 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || |||||||| || |||| ||| || || | ||||| ||| Sbjct 203152 TGGATCTTCGACTTAACGTTGTCGATGGTATCCGAGGATTCGACCTCAAGAGTGATGGTC 203093 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| || | || || | ||| | ||||| || Sbjct 203092 TTGCCGGTGAGGGTCTTGACGAAGATCTGCATCTT 203058 >seq737 Length=337091 Score = 138 bits (152), Expect = 3e-27 Identities = 161/216 (75%), Gaps = 1/216 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| |||||||||||||| || || |||| ||||| |||| | ||||| || || Sbjct 284543 AGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCGGCCGTCC 284602 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || ||||| || |||||||| || || ||||||||||| || || || |||||||| Sbjct 284603 TCGAGTTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCC 284662 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || || || ||| ||| ||||||||||| || | ||||| || | ||||| ||| Sbjct 284663 TGAATTTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTC 284722 Query 225682 TTGCCCGTCAAAGTTTTTATGAA-CACTTGCATTTT 225716 || ||||| | || || | ||| | ||| ||||| Sbjct 284723 TTACCCGTAAGGGTCTTCACGAAGCTATTGAATTTT 284758 >seq27 Length=240170 Score = 122 bits (134), Expect = 2e-22 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || ||||| || ||| || || |||| ||||| |||| | ||| | || || Sbjct 62180 AGCACGAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCGTCC 62239 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || ||||| || |||||||| ||||| ||||||||||| || || || |||||||| Sbjct 62240 TCGAGTTGCTTGCCGGCGAAGATCAGTCGCTGTTGGTCGGGGGGGATTCCCTCCTTGTCC 62299 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| ||||||||||| | ||||| || | ||||| ||| Sbjct 62300 TGGATCTTGGACTTGACATTGTCGATGGTGTCGCTCGACTCCACCTCAAGGGTGATAGTC 62359 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||||| | || || | ||| | ||||| Sbjct 62360 TTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 62391 >seq434 Length=564148 Score = 86.0 bits (94), Expect = 1e-11 Identities = 186/276 (67%), Gaps = 8/276 (3%) Strand=Plus/Minus Query 193500 TTCTGGTTGTTCTTTCGACAGATGGCGTCTTTGTAGACGATGAAGGGCATGCCCACCTCC 193559 ||||||||| |||| || | | || ||||| | |||||||| | || ||| Sbjct 552485 TTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAAAGCATGAAGGGGTTTCCAGTCTCA 552426 Query 193560 GCTTGAGCGACGAGAATGTGATGCCAAAGTTCTTGAGCTTTCACTGTCGTTCTGGCCTTT 193619 | ||||| |||||||| || ||| || | ||||| || | || ||||||| Sbjct 552425 GTCTGAGCTTCGAGAATGGCATACCACAGCTTCTGAGCCTTAA---TC-TTCTGGCGGCC 552370 Query 193620 CCTTCCCTCT----CGTACTTTTCGTACAGTTCCTCAAAATCTTGTCCGTAGATTTCGTC 193675 | |||||| ||||||| |||||||| ||||||| || | || |||| ||| | Sbjct 552369 ACGACCCTCTGCTTCGTACTTCTCGTACAGGGCCTCAAACTCGTCGCCATAGACATCGGC 552310 Query 193676 GAGACCGGGAGCTTCCTTTGGGCAAAAGAGACTCCAATCTCCATCACTTTCCACCCTCTT 193735 || || || ||| || ||||| | ||| |||| || |||| | || || | ||| Sbjct 552309 TAGGCCAGGGCATTCGTTGGGGCACATGAGGGTCCACTCGCCATTCTTCTCGACACGCTT 552250 Query 193736 CATGAAGAGGTCAGATGTCCAAATGGCGTAGAAAAG 193771 |||||||||||| | |||||| || |||||| Sbjct 552249 CATGAAGAGGTCGGGAATCCAAAGAGCCAGGAAAAG 552214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192519816917030