Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq434 242 5e-59 >seq434 Length=564148 Score = 242 bits (268), Expect = 5e-59 Identities = 1194/1875 (64%), Gaps = 41/1875 (2%) Strand=Plus/Minus Query 76782 GTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 76841 || ||||| || |||| | |||| || |||||| || |||||||| ||||| || || Sbjct 553487 GTGAACTGGATAGGAGCGGCAGCGGCTTGTGTACGAAGGTAGTACATGCCAGTCTTCAGT 553428 Query 76842 CCCAGACTCCATCC-GTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTAT 76900 || || |||| || ||| |||||||| || || | ||| | | || || || Sbjct 553427 CCGAGCTTCCAACCAGTA-AAATGCATACTGGTAATCTTGCCCATAGTGGGTTCTCTCAT 553369 Query 76901 ATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTAT 76960 || || |||| ||| || || || ||||| || || | ||||| ||||| | | Sbjct 553368 GTGGATGTTCAGCGATTGGGACTGGTCAATGAATGCACCACGGTCAGCGGCCATCTGGAC 553309 Query 76961 AATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAG 77020 || || |||| |||||||||| || ||| | | || ||||| | || Sbjct 553308 AACAGTTCGCTGAGAGATTTCCCAAACGGTCTTGTAGAGAGCCTTTATATCGGCAGGGRT 553249 Query 77021 GTTTGTA---TTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCATCATT 77077 ||| | | || ||||| ||||| || || | || || ||||| || |||| Sbjct 553248 GTTAGGAATGTTCTGAATCGAACCGCCCTCAGCAATGATACGGTTCTTCATGCTATCAGA 553189 Query 77078 CCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTCC 77137 ||| | | | || | | | | || | ||| || || | || ||||| || Sbjct 553188 CCAGAGACCCATATCAACAAGATCCTTGAGTAACCAAGGGTTGACAACCTGGAATTCGCC 553129 Query 77138 AGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCC 77197 || | || | || | || ||||| ||| || || || | |||||||||| || Sbjct 553128 AGCAAGGACACGGCGGGAATAGATATTCGAGGTGTAAGGCTCGAAGCATTCATTGTTACC 553069 Query 77198 CAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACC 77257 || || || | |||| || || ||||| || || ||||| || || || | | ||| Sbjct 553068 CAGGATCTGGGAAGTACTGGCTGTAGGCATGGGGGCGACCAACAAGCTGTTGCGTACACC 553009 Query 77258 ATGTGTTCTGA-TTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAACAT 77316 | || | || | |||| || ||||| | |||| ||||| ||||| || || |||| Sbjct 553008 A-GTTTGCTTAATTTTCTCCTTTAGGCTTGTCCAGTCCCAGAGATCCGACGGGGTGACAT 552950 Query 77317 CCCAAAGATCGTATTGTAGAATTCCGTTACTAG-CATATGATCCATTATATGTTTCATAA 77375 ||| | |||||||| || || || | | || || || || | ||| || ||| Sbjct 552949 TCCACATGTCGTATTGAAGGATACCCTG-CGAGACAGGAGAACCTTCATAGGTAGAGTAA 552891 Query 77376 GGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCG 77435 ||||| || | || | || || ||| ||| || | | || ||||| ||| Sbjct 552890 GGTCCATCAACCTTGGCAATATCCGAAGACGCAGTCAAGGCGGCATGGTAGATTGTCTCG 552831 Query 77436 AAAATCTTCTTATTGAGAT-CTTGTGCTTCAATACTATCAAACGGATAATGTAAAAGAAT 77494 || |||| ||| || || | | || || || || || || | | | Sbjct 552830 AAGATCTGCTTGTTCAGCTGCCTG-GCCTCTGGTGACTCGAAAGGCATGCGCAGCGCCAG 552772 Query 77495 AAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAAT 77554 || | ||| || | |||||||| |||| |||||| || | |||| | | ||| | Sbjct 552771 GAATGTATCAGCAAGACCCTGAACACCAAGACCAATGGGACGGTGTCGCATGTTGC---T 552715 Query 77555 TTTA---GCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTCTAAC 77611 ||| || ||||| | || || || || | ||| || ||| | || || || ||| Sbjct 552714 GTTACGGGCCTCTGGGACGGGGTAGTAGTTGACGTCAATGATTCTGTTCAGGTTGTGAAC 552655 Query 77612 AACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCCATC--TATAACAAAC 77669 || |||| | || || | | || | || ||| | |||| || |||| ||| Sbjct 552654 GACGACTTGAGTAACCTCATGCAACTTCTGGAAGTCATAGGTTCCCTCGTTATAGTCAAC 552595 Query 77670 --ATGTT--CAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCATA 77725 ||| ||| || | || || | || ||||| || ||||| | || | | || Sbjct 552594 GAATGACGGCAACGCAAGGGAAGCCAAGTTGCAAACAGCCACCTCGTCAGGGGCAGAGTA 552535 Query 77726 TTGTATTATCTCGGTACATAGATTACTACATTTGA-TAGTGCCCAGATTTTGTTGGTTGC 77784 | || ||||| || || || || | | | || |||| || || || | ||||||| Sbjct 552534 CTCGATGATCTCAGTGCAGAGGTT-CGAGCTGCGAATAGTACCAAGGTTCTTCTGGTTGC 552476 Query 77785 TCTTTTTATTGCA-TGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGAT 77843 |||| ||||| ||| ||||| ||||| || || || | || || ||| |||| | | Sbjct 552475 TCTTGCGGTTGCAGTGA-TCCTTGTAAAGCATGAAGGGGTTTCCAGTCTCAGTCTGAGCT 552417 Query 77844 TCGATAATAGATTTCCAGACGACTCT-AGCTTTTATCATAGATTTGTATCGCCTCTCTCT 77902 |||| ||| | | ||| | | ||| ||| || ||| | | || | |||| Sbjct 552416 TCGAGAATGGCATACCACA-GCTTCTGAGCCTTAATCTTCTGGCGGCCACGACCCTCTGC 552358 Query 77903 TTCATATTGA--GTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGG 77960 ||| || | ||| | ||| ||||| || || || | ||||| | | |||||| Sbjct 552357 TTCGTACTTCTCGTACAGGGCC--TCAAACTCGTCGCCATAGACATCGGCTAGGCCAGGG 552300 Query 77961 CATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGA 78020 ||||| || |||||||| | | ||| || |||| | || || || ||||| ||||| Sbjct 552299 CATTCGTTGGGGCACATGAGGGTCCACTCGCCATTCTTCTCGACACGCTTCATGAAGAGG 552240 Query 78021 TCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTC 78080 || || ||||| ||||| | || ||||| |||| | |||||| || || ||| Sbjct 552239 TCGGGAATCCAAAGAGCCAGGAAAAGATCACGGGCACGGACTTCTTCCTTGCCGTGGTTC 552180 Query 78081 TTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATA 78140 ||| ||| || || ||||| | || ||| || ||||| || || ||||| || || | | Sbjct 552179 TTTCGAAGGTCCAGGAACTCGAAAACATCCGAGTGCCAAGGCTCGAGATAGATGGCAAAA 552120 Query 78141 ACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTC 78200 | ||||||| || || || ||||| |||| ||||| || |||||||| | || | Sbjct 552119 GCACCAGGTCTCTTGTTGCCACCCTGGTCTACGTATCTAGCAGTGTTATTGAAGACACGG 552060 Query 78201 AACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCG 78260 | ||| || | ||||||||| || || || || || || | ||| || || | ||| Sbjct 552059 AGCATGGGTACAATACCGTTCGAGGTGCCGTTAGTGCCGGCAATGTATGAGCCGGTAGCG 552000 Query 78261 CGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGT 78320 ||||| ||| | || || || || |||||||| || || | ||||| Sbjct 551999 CGAATGCGGTGGATGTTGAGACCAATACCACCGGCCATCTTGGAGATCATGGCGCAGGTC 551940 Query 78321 TTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTA 78380 || | || |||||||||||||| || ||||| ||| |||||| || || || ||| Sbjct 551939 TTAAGGGTGTCGTAGATACCCTCAATGCTGTCGTCCTTCATGTCAACGAGGAAGCAGGAT 551880 Query 78381 GACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCAT 78440 || | ||| || ||||| ||||| || | || || || ||||| || || || Sbjct 551879 GAGAGCTGAGCCTGGGGTGTTCCAGCATTGAAGAGAGTTGGGGAGGCATGGGTGAAGTAT 551820 Query 78441 TTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTC----CCATTGATGAAT 78496 || || | || || || || | ||| | || | || || |||| Sbjct 551819 TTGCTGGACATGAGGTTATAGGTCTGTATAACCTTCTCCACATCATCACCCCAGATG--- 551763 Query 78497 TCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTT 78556 || || || |||||||| | ||| ||||| ||||| || || |||||| | | || Sbjct 551762 -CCGACAGCCACACGCATGATCATGTGCTGCGGTCTCTCGACGATCTTATCGTCAAGCTT 551704 Query 78557 CAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTC 78616 | || |||||| |||||||| || || || || || | ||| |||||||| || Sbjct 551703 GAGCAGATATGATCGCTCCAAAGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCTCTGTC 551644 Query 78617 GTAAATAATAACAGA 78631 || | ||| |||| Sbjct 551643 ATAGACAATGGCAGA 551629 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694662330896800