Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq434 235 8e-57 >seq434 Length=564148 Score = 235 bits (260), Expect = 8e-57 Identities = 1189/1870 (64%), Gaps = 43/1870 (2%) Strand=Plus/Minus Query 75377 GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 75436 |||||||| || |||| || || | || |||||| || |||||||| ||||| || || Sbjct 553487 GTGAACTGGATAGGAGCGGCAGCGGCTTGTGTACGAAGGTAGTACATGCCAGTCTTCAGT 553428 Query 75437 CCCAGACTCCATCC-GTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTAT 75495 || || |||| || ||| |||||||| || || | ||| | | || || || Sbjct 553427 CCGAGCTTCCAACCAGTA-AAATGCATACTGGTAATCTTGCCCATAGTGGGTTCTCTCAT 553369 Query 75496 ATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTAT 75555 || || |||| ||| || || || ||||| || || | ||||| ||||| | | Sbjct 553368 GTGGATGTTCAGCGATTGGGACTGGTCAATGAATGCACCACGGTCAGCGGCCATCTGGAC 553309 Query 75556 AATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAG 75615 || || |||| |||||||||| || ||| | | || ||||| | || Sbjct 553308 AACAGTTCGCTGAGAGATTTCCCAAACGGTCTTGTAGAGAGCCTTTATATCGGCAGGGRT 553249 Query 75616 ATTTGTA---TTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCATCATT 75672 || | | || ||||| || ||||| |||| || || ||||| || |||| Sbjct 553248 GTTAGGAATGTTCTGAATCGAACCGCCCTCAGCAATGATACGGTTCTTCATGCTATCAGA 553189 Query 75673 CCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCC 75732 ||| | | || | | | | || | ||| || |||| || ||||| || Sbjct 553188 CCAGAGACCCATATCAACAAGATCCTTGAGTAACCAAGGGTTGACAACCTGGAATTCGCC 553129 Query 75733 AGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCC 75792 || | || | || | || ||||| ||| || || || | |||||||||| || Sbjct 553128 AGCAAGGACACGGCGGGAATAGATATTCGAGGTGTAAGGCTCGAAGCATTCATTGTTACC 553069 Query 75793 CAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACC 75852 || || || | ||| || || ||||| || || ||||| || || || | | ||| Sbjct 553068 CAGGATCTGGGAAGTACTGGCTGTAGGCATGGGGGCGACCAACAAGCTGTTGCGTACACC 553009 Query 75853 ATGTGTTCTGA-TTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTACAACAT 75911 | || | || | |||| || ||||| | |||| ||||| ||||| || || |||| Sbjct 553008 A-GTTTGCTTAATTTTCTCCTTTAGGCTTGTCCAGTCCCAGAGATCCGACGGGGTGACAT 552950 Query 75912 CCCAGAGATCGTATTGTAGAATTCCGTTGCTAG-CATATGATCCATTATATGTTTCGTAA 75970 ||| | |||||||| || || || | || || || || || | ||| || |||| Sbjct 552949 TCCACATGTCGTATTGAAGGATACCCT-GCGAGACAGGAGAACCTTCATAGGTAGAGTAA 552891 Query 75971 GTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCG 76030 | || || | || | || || ||| || || | | || ||||| ||| Sbjct 552890 GGTCCATCAACCTTGGCAATATCCGAAGACGCAGTCAAGGCGGCATGGTAGATTGTCTCG 552831 Query 76031 AAAATCTTCTTATTAAGAT-CTTGCGCTTCAAGACTATCAAAAGGATAATGTAAAAGAAT 76089 || |||| ||| || || | | || || || | || ||||| | | | Sbjct 552830 AAGATCTGCTTGTTCAGCTGCCTG-GCCTCTGGTGACTCGAAAGGCATGCGCAGCGCCAG 552772 Query 76090 AAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAAT 76149 |||| ||| || || |||||||| |||| |||||| || | |||| | | ||| | Sbjct 552771 GAATGTATCAGCAAGACCCTGAACACCAAGACCAATGGGACGGTGTCGCATGTTGCTGTT 552712 Query 76150 TTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTCTGACAAC 76209 || ||||| | ||||| || || | || || ||| | || || || || || Sbjct 552711 ACGGGCCTCTGGGACGGGGTAGTAGTTGACGTCAATGATTCTGTTCAGGTTGTGAACGAC 552652 Query 76210 TACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCATC--TATCACAAACATA 76267 |||| | || || | | || | || ||| | |||| || ||| ||| | Sbjct 552651 GACTTGAGTAACCTCATGCAACTTCTGGAAGTCATAGGTTCCCTCGTTATAGTCAACGAA 552592 Query 76268 TTAAGA----GCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCA---TA 76320 | | | || | || || | || ||||| || ||||| | || |||| || Sbjct 552591 TGACGGCAACGCAAGGGAAGCCAAGTTGCAAACAGCCACCTCGTCAGG---GGCAGAGTA 552535 Query 76321 TTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCT 76380 | || ||||| ||||| || || | ||||| ||||| || | |||||||| Sbjct 552534 CTCGATGATCTCAGTGCAGAGGTTCGAGCTGCGAATAGTACCAAGGTTCTTCTGGTTGCT 552475 Query 76381 CTTTTTGTTACA-TGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATT 76439 ||| ||| || ||| ||||| ||||| | || || ||||||| ||| |||| | || Sbjct 552474 CTTGCGGTTGCAGTGA-TCCTTGTAAAGCATGAAGGGGTTTCCAGTCTCAGTCTGAGCTT 552416 Query 76440 CGATAATAGATTTCCAGACGACTCT-AGCTTTTATTATAGATTTGTATCGCTTCTCTCTT 76498 ||| ||| | | ||| | | ||| ||| || || | | || |||| | Sbjct 552415 CGAGAATGGCATACCACA-GCTTCTGAGCCTTAATCTTCTGGCGGCCACGACCCTCTGCT 552357 Query 76499 TCATA-TTGT-GTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGAC 76556 || || || | ||| | || ||||| || || || | ||||| | | ||||| | Sbjct 552356 TCGTACTTCTCGTACAGGGCC--TCAAACTCGTCGCCATAGACATCGGCTAGGCCAGGGC 552299 Query 76557 ATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGAT 76616 |||| || || ||||| | | |||||| |||| | || || || ||||| ||||| | Sbjct 552298 ATTCGTTGGGGCACATGAGGGTCCACTCGCCATTCTTCTCGACACGCTTCATGAAGAGGT 552239 Query 76617 CAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCT 76676 | || ||||| ||||| | || ||||| |||| | |||||| || || |||| Sbjct 552238 CGGGAATCCAAAGAGCCAGGAAAAGATCACGGGCACGGACTTCTTCCTTGCCGTGGTTCT 552179 Query 76677 TTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAA 76736 || ||| || |||||||| | || ||| || ||||| || || ||||| || || | | Sbjct 552178 TTCGAAGGTCCAGGAACTCGAAAACATCCGAGTGCCAAGGCTCGAGATAGATGGCAAAAG 552119 Query 76737 CACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCA 76796 |||| |||| || || || ||||| |||| ||||| ||||||||||| | || | | Sbjct 552118 CACCAGGTCTCTTGTTGCCACCCTGGTCTACGTATCTAGCAGTGTTATTGAAGACACGGA 552059 Query 76797 ACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCAC 76856 ||| || | ||| ||||| || || || || || || | ||| || || || | Sbjct 552058 GCATGGGTACAATACCGTTCGAGGTGCCGTTAGTGCCGGCAATGTATGAGCCGGTAGCGC 551999 Query 76857 GAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTT 76916 |||| || || || || || || ||||| || ||||| | || ||| | Sbjct 551998 GAATGCGGTGGATGTTGAGACCAATACCACCGGCCATCTTGGAGATCATGGCGCAGGTCT 551939 Query 76917 TCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAG 76976 | | ||||| ||||| ||||| || || || ||| |||||| || || || ||| | Sbjct 551938 TAAGGGTGTCGTAGATACCCTCAATGCTGTCGTCCTTCATGTCAACGAGGAAGCAGGATG 551879 Query 76977 ACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATT 77036 | | ||| || ||||| ||||| || | || || || ||||| ||||| ||| Sbjct 551878 AGAGCTGAGCCTGGGGTGTTCCAGCATTGAAGAGAGTTGGGGAGGCATGGGTGAAGTATT 551819 Query 77037 TTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCT--ATATC----CCATTGATGAA 77090 | || | || || || || | ||||| ||||| | ||| || |||| Sbjct 551818 TGCTGGACATGAGGTTATAGGTCTGTATAAC--CTTCTCCACATCATCACCCCAGATG-- 551763 Query 77091 TTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTT 77150 || ||||| |||||||| | ||| ||||| |||| || || |||||| | | | Sbjct 551762 --CCGACAGCCACACGCATGATCATGTGCTGCGGTCTCTCGACGATCTTATCGTCAAGCT 551705 Query 77151 TCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTT 77210 | | || |||||| |||||||| || || || || || | ||| |||||||| | Sbjct 551704 TGAGCAGATATGATCGCTCCAAAGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCTCTGT 551645 Query 77211 CGTAAATAAT 77220 | || | ||| Sbjct 551644 CATAGACAAT 551635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712927760798400