Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02-
23] 745 sequences; 39,901,278 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq737 132 1e-25
seq698 118 2e-21
seq27 116 9e-21
>seq737
Length=337091
Score = 132 bits (146), Expect = 1e-25
Identities = 156/211 (74%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | |||||| || || ||||| ||||| || ||||||||||| |||| | |||||
Sbjct 284536 GAGACGGAGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCG 284595
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
|| || || || || ||||||||||| || | ||| ||||| | | ||| || ||
Sbjct 284596 GCCGTCCTCGAGTTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCGGGGGGGATGCCCTC 284655
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| || |||||||| |||||| | || | | |||| ||| ||| || || || ||
Sbjct 284656 CTTGTCCTGAATTTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGT 284715
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAG 152096
||||| || ||||| || ||||||||||||
Sbjct 284716 GATAGTCTTACCCGTAAGGGTCTTCACGAAG 284746
>seq698
Length=460427
Score = 118 bits (130), Expect = 2e-21
Identities = 157/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946
|||| ||| ||||| || || || ||||| || || |||||||| ||| | ||||
Sbjct 203795 AGTCGGAGAACAAGGTGCAGGGTCGACTCCTTCTGAATGTTGTAGTCGCTCAGCGTTCGG 203736
Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006
||||| || | || ||||| |||||||| | || ||||| | || |||||| |||
Sbjct 203735 CCATCCTCCAACTGCTTACCGGCAAAGATAAGTCGTTGTTGGTCGGGCGGGATTCCCTCC 203676
Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066
|| || || || || |||||| | || | |||| ||| ||| || ||||| ||
Sbjct 203675 TTGTCCTGGATCTTGGATTTGACGTTGTCGATCGTGTCCGAAGACTCCACCTCAAGGGTG 203616
Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || ||||| ||||||||||||||||| | |||||
Sbjct 203615 ATTGTCTTGCCAGTGAGAGTCTTCACGAATATTTGCAT 203578
Score = 104 bits (114), Expect = 5e-17
Identities = 155/218 (71%), Gaps = 4/218 (2%)
Strand=Plus/Minus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
||||||||| || ||||| ||| || ||||||||||| |||| | ||| | || ||
Sbjct 203273 GAGGACAAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGACCGTC 203214
Query 151952 TTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTT 152009
||| || ||||| |||||||| || | | ||| ||||| | | ||| || |||||
Sbjct 203213 TTCAAGTTGCTTT--CCGGCGAAAATCAATCGCTGTTGGTCAGGGGGGATGCCCTCCTTG 203156
Query 152010 TCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATA 152069
|| || || || || || | || | | | || || || || |||||||| ||
Sbjct 203155 TCCTGGATCTTCGACTTAACGTTGTCGATGGTATCCGAGGATTCGACCTCAAGAGTGATG 203096
Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|| ||||| ||||| ||||| ||||||| |||||| ||
Sbjct 203095 GTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATCTT 203058
Score = 98.7 bits (108), Expect = 2e-15
Identities = 146/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | |||||| || |||||||| || || || ||||||||||| |||| || ||||
Sbjct 203568 GAGACGGAGGACGAGGTGAAGAGTGGATTCCTTCTGGATGTTGTAGTCGGATAGGGTTCG 203509
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
||||| || || || ||||||||||| | | ||||||||| | | || || ||
Sbjct 203508 GCCATCCTCAAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCAGGAGGAATGCCCTC 203449
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| || ||||| || |||||| | || | | |||| || ||| || || | ||
Sbjct 203448 CTTGTCCTGAATCTTCGACTTGACATTGTCGATGGTGTCGGACGACTCGACCTCCAAGGT 203389
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCAC 152092
|| || || || || || ||||| ||
Sbjct 203388 GATGGTCTTTCCGGTAAGGGTCTTTAC 203362
>seq27
Length=240170
Score = 116 bits (128), Expect = 9e-21
Identities = 157/219 (72%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | ||| || || ||||| || ||| || ||||||||||| |||| | ||| |
Sbjct 62173 GAGGCGGAGCACGAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCG 62232
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
|| || || || || ||||||||||| || | ||| ||||| | | |||||| ||
Sbjct 62233 GCCGTCCTCGAGTTGCTTGCCGGCGAAGATCAGTCGCTGTTGGTCGGGGGGGATTCCCTC 62292
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| || || || || |||||| | || | | |||| ||| || ||||| ||
Sbjct 62293 CTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGCTCGACTCCACCTCAAGGGT 62352
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||| ||||||||||| ||||| ||||||| ||||||
Sbjct 62353 GATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 62391
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153809786419895
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |