Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02-
23] 745 sequences; 39,901,278 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq698 185 2e-41
seq27 163 6e-35
seq737 159 7e-34
seq334 116 8e-21
seq735 87.8 4e-12
seq501 87.8 4e-12
>seq698
Length=460427
Score = 185 bits (204), Expect = 2e-41
Identities = 179/230 (78%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||||||||| || || || || || | ||||| || || |||||||||||||| | |
Sbjct 203287 CCACCACGCAGACGGAGGACAAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAA 203228
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| ||||| || || || ||||| || ||||| || ||||| || ||||||||| ||
Sbjct 203227 AGAGTGCGACCGTCTTCAAGTTGCTTTCCGGCGAAAATCAATCGCTGTTGGTCAGGGGGG 203168
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| ||||||||||| |||||||| | || ||| | ||||| || ||||| | ||||||
Sbjct 203167 ATGCCCTCCTTGTCCTGGATCTTCGACTTAACGTTGTCGATGGTATCCGAGGATTCGACC 203108
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
|| |||||||| ||||| || || | ||||| ||||| |||||||| ||
Sbjct 203107 TCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATCTT 203058
Score = 163 bits (180), Expect = 6e-35
Identities = 173/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| || || || || || || || | || || || || |||||||||||
Sbjct 203805 ACCACCGCGAAGTCGGAGAACAAGGTGCAGGGTCGACTCCTTCTGAATGTTGTAGTCGCT 203746
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||||| ||||||||||| | || || ||||||||||| | ||||||||||| |||
Sbjct 203745 CAGCGTTCGGCCATCCTCCAACTGCTTACCGGCAAAGATAAGTCGTTGTTGGTCGGGCGG 203686
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| ||||||||||| |||||||| | ||| ||| | ||||| |||||||||| || ||
Sbjct 203685 GATTCCCTCCTTGTCCTGGATCTTGGATTTGACGTTGTCGATCGTGTCCGAAGACTCCAC 203626
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || ||||| ||||| || || | |||||| |||||||| |||||
Sbjct 203625 CTCAAGGGTGATTGTCTTGCCAGTGAGAGTCTTCACGAATATTTGCAT 203578
Score = 152 bits (168), Expect = 1e-31
Identities = 172/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|| ||||| || || || |||| || | ||| || || ||||||||||||||
Sbjct 204032 CCTCCACGGAGACGGAGAACCAAGTGGAGCGTAGACTCCTTCTGGATGTTGTAGTCGCTC 203973
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| ||||| || ||||| || || || || || ||||| | ||||||||| ||| |||
Sbjct 203972 AGAGTGCGACCGTCCTCCAGCTGCTTTCCAGCGAAGATGAGACGTTGTTGATCAGGAGGA 203913
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| || |||||||| || ||| ||||| || ||| | ||||| ||||| |||| ||| ||
Sbjct 203912 ATGCCTTCCTTGTCCTGAATC-TTGCTCTTCACGTTGTCGATGGTGTCGGAAGATTCAAC 203854
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|||||| || || ||||| |||||||| ||||| || || || |||||
Sbjct 203853 TTCGAGGGTAATTGTCTTCCCCGTCAATGTCTTGACAAAGATTTGCAT 203806
Score = 141 bits (156), Expect = 2e-28
Identities = 161/216 (75%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || || || || || || | ||| ||| || |||||||||||||| |
Sbjct 203577 ACCACCACGGAGACGGAGGACGAGGTGAAGAGTGGATTCCTTCTGGATGTTGTAGTCGGA 203518
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || ||||||||||| || || || ||||| |||||||| || || |||||| ||
Sbjct 203517 TAGGGTTCGGCCATCCTCAAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCAGGAGG 203458
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| ||||||||||| || ||||| | || || | ||||| ||||| || | |||||
Sbjct 203457 AATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCGATGGTGTCGGACGACTCGAC 203398
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
|| | ||||| ||||| || || | ||||| ||
Sbjct 203397 CTCCAAGGTGATGGTCTTTCCGGTAAGGGTCTTTAC 203362
>seq27
Length=240170
Score = 163 bits (180), Expect = 6e-35
Identities = 173/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| ||||| || || || || | ||||| || || |||||||||||||| |
Sbjct 62164 ACCACCACGGAGGCGGAGCACGAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGA 62223
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| |||||||| ||||| ||||| || ||||| ||||||| || |||||||| ||
Sbjct 62224 GAGAGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATCAGTCGCTGTTGGTCGGGGGG 62283
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| ||||||||||| |||||||| | || || | ||||| ||||| | || ||
Sbjct 62284 GATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGCTCGACTCCAC 62343
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || ||||| ||||| ||||| | ||||| ||||| ||||||||
Sbjct 62344 CTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 62391
>seq737
Length=337091
Score = 159 bits (176), Expect = 7e-34
Identities = 177/234 (76%), Gaps = 3/234 (1%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || || || || || || | ||| || || |||||||||||||| |
Sbjct 284527 ACCACCACGGAGACGGAGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGA 284586
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| || ||||| ||||| ||||| || ||||| ||||||| ||| |||||||| ||
Sbjct 284587 AAGAGTTCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCGGGGGG 284646
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| ||||||||||| || || || | || || | ||||| ||||| |||| || ||
Sbjct 284647 GATGCCCTCCTTGTCCTGAATTTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCAC 284706
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA--TATCTGCATTTTC 283103
||||| ||||| ||||||||||| | ||||| ||||| ||| || ||||||
Sbjct 284707 CTCGAGGGTGATAGTCTTACCCGTAAGGGTCTTCACGAAGCTAT-TGAATTTTC 284759
>seq334
Length=652976
Score = 116 bits (128), Expect = 8e-21
Identities = 136/184 (74%), Gaps = 0/184 (0%)
Strand=Plus/Plus
Query 230227 TCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATTTTCG 230286
|||||||||| || | |||||| ||| || ||||| ||||| || || ||| | || |
Sbjct 129041 TCGGCATGAACGCCAACCTCATGAAGCAGTACATCGAGTTCGTCGCCGACCGTCTATTGG 129100
Query 230287 TGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCA 230346
| || || || ||||||| ||||| | ||| |||||||||| || |||||| ||
Sbjct 129101 TCGCCCTCGGTAACGAGAAGGTGTACCGCGCCACAAACCCCTTCGACTTCATGGAGAACA 129160
Query 230347 TTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCG 230406
| || ||| || || || ||||||||||| ||||| ||| |||| || || | | |||
Sbjct 129161 TCTCCCTCGGTGGCAAGACCAACTTCTTCGAGAAGCGCGTCGGCGACTACCAGAAGGCCG 129220
Query 230407 GTGT 230410
||||
Sbjct 129221 GTGT 129224
>seq735
Length=540243
Score = 87.8 bits (96), Expect = 4e-12
Identities = 129/175 (74%), Gaps = 6/175 (3%)
Strand=Plus/Minus
Query 274544 ATCTGTCATGATCATAACATGTCCATACCGAAGCGAGGAAGTATCTTTATACAACTTCCC 274603
||| | ||||||||| | || ||||||||||| || |||| |||| | ||| |
Sbjct 478873 ATCGGCCATGATCATCAGGTGCCCATACCGAAGAGATTTGTTATCGGTATATA-CTTGCT 478815
Query 274604 TGTT-TGAAGCCCAAGAATTTGCTTGA-GAGCGGTGATTTCTTCGTTCTTTGTGATACTC 274661
||| | || || || | |||||||| | | | |||||||| |||||| |||| ||
Sbjct 478814 TGTGCTTCAGACCGAGGAATTGCTTGATGTTCTG-GATTTCTTGGTTCTTCATGAT-CTG 478757
Query 274662 GCCACA-GAAGCATCACGTACGTTCAGCAACTTACCGCGGAGAGGGAAAACGCCA 274715
| || ||||||||||| ||||| |||| |||||| || ||||||||||| |||
Sbjct 478756 GTCAATCGAAGCATCACGGACGTTGAGCATCTTACCCCGAAGAGGGAAAACACCA 478702
>seq501
Length=313222
Score = 87.8 bits (96), Expect = 4e-12
Identities = 111/153 (73%), Gaps = 0/153 (0%)
Strand=Plus/Minus
Query 317028 CGGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACC 317087
|||||| |||||||||| || |||| | ||||||| || || ||||| |||||
Sbjct 113114 CGGGAAACCTTCCAACTTGCCACCGGCAATACTCTTCATCAGAGTGGATTTGCCGGCACC 113055
Query 317088 ATTGGGGCCGCAAAGACCATACCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTCAG 317147
||| |||| ||||||||||| || | ||||||| || || ||||| |||
Sbjct 113054 GTTGCGGCCACAAAGACCATAGCGGTGTCCCTTCAATAGCCGAAGGTTGGTGTGAGACAG 112995
Query 317148 AAGAATCTTACCACCATATGCCAGAGAGAACTC 317180
||||| | |||||||||| |||| ||||| ||
Sbjct 112994 AAGAAGCATACCACCATAGGCCAATGAGAAGTC 112962
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046729208547230
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |