Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq698 185 2e-41 seq27 163 6e-35 seq737 159 7e-34 seq334 116 8e-21 seq735 87.8 4e-12 seq501 87.8 4e-12 >seq698 Length=460427 Score = 185 bits (204), Expect = 2e-41 Identities = 179/230 (78%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||||||||| || || || || || | ||||| || || |||||||||||||| | | Sbjct 203287 CCACCACGCAGACGGAGGACAAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAA 203228 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||| || || || ||||| || ||||| || ||||| || ||||||||| || Sbjct 203227 AGAGTGCGACCGTCTTCAAGTTGCTTTCCGGCGAAAATCAATCGCTGTTGGTCAGGGGGG 203168 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| |||||||| | || ||| | ||||| || ||||| | |||||| Sbjct 203167 ATGCCCTCCTTGTCCTGGATCTTCGACTTAACGTTGTCGATGGTATCCGAGGATTCGACC 203108 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || |||||||| ||||| || || | ||||| ||||| |||||||| || Sbjct 203107 TCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATCTT 203058 Score = 163 bits (180), Expect = 6e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || || || || || || || | || || || || ||||||||||| Sbjct 203805 ACCACCGCGAAGTCGGAGAACAAGGTGCAGGGTCGACTCCTTCTGAATGTTGTAGTCGCT 203746 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||| ||||||||||| | || || ||||||||||| | ||||||||||| ||| Sbjct 203745 CAGCGTTCGGCCATCCTCCAACTGCTTACCGGCAAAGATAAGTCGTTGTTGGTCGGGCGG 203686 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||||| | ||| ||| | ||||| |||||||||| || || Sbjct 203685 GATTCCCTCCTTGTCCTGGATCTTGGATTTGACGTTGTCGATCGTGTCCGAAGACTCCAC 203626 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||| || || | |||||| |||||||| ||||| Sbjct 203625 CTCAAGGGTGATTGTCTTGCCAGTGAGAGTCTTCACGAATATTTGCAT 203578 Score = 152 bits (168), Expect = 1e-31 Identities = 172/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| || || || |||| || | ||| || || |||||||||||||| Sbjct 204032 CCTCCACGGAGACGGAGAACCAAGTGGAGCGTAGACTCCTTCTGGATGTTGTAGTCGCTC 203973 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||| || ||||| || || || || || ||||| | ||||||||| ||| ||| Sbjct 203972 AGAGTGCGACCGTCCTCCAGCTGCTTTCCAGCGAAGATGAGACGTTGTTGATCAGGAGGA 203913 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || || |||||||| || ||| ||||| || ||| | ||||| ||||| |||| ||| || Sbjct 203912 ATGCCTTCCTTGTCCTGAATC-TTGCTCTTCACGTTGTCGATGGTGTCGGAAGATTCAAC 203854 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||||| || || ||||| |||||||| ||||| || || || ||||| Sbjct 203853 TTCGAGGGTAATTGTCTTCCCCGTCAATGTCTTGACAAAGATTTGCAT 203806 Score = 141 bits (156), Expect = 2e-28 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || || || || | ||| ||| || |||||||||||||| | Sbjct 203577 ACCACCACGGAGACGGAGGACGAGGTGAAGAGTGGATTCCTTCTGGATGTTGTAGTCGGA 203518 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || ||||||||||| || || || ||||| |||||||| || || |||||| || Sbjct 203517 TAGGGTTCGGCCATCCTCAAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCAGGAGG 203458 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| || ||||| | || || | ||||| ||||| || | ||||| Sbjct 203457 AATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCGATGGTGTCGGACGACTCGAC 203398 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || | ||||| ||||| || || | ||||| || Sbjct 203397 CTCCAAGGTGATGGTCTTTCCGGTAAGGGTCTTTAC 203362 >seq27 Length=240170 Score = 163 bits (180), Expect = 6e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| ||||| || || || || | ||||| || || |||||||||||||| | Sbjct 62164 ACCACCACGGAGGCGGAGCACGAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGA 62223 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||| ||||| ||||| || ||||| ||||||| || |||||||| || Sbjct 62224 GAGAGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATCAGTCGCTGTTGGTCGGGGGG 62283 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||||| | || || | ||||| ||||| | || || Sbjct 62284 GATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGCTCGACTCCAC 62343 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||| ||||| | ||||| ||||| |||||||| Sbjct 62344 CTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 62391 >seq737 Length=337091 Score = 159 bits (176), Expect = 7e-34 Identities = 177/234 (76%), Gaps = 3/234 (1%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || || || || | ||| || || |||||||||||||| | Sbjct 284527 ACCACCACGGAGACGGAGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGA 284586 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || ||||| ||||| ||||| || ||||| ||||||| ||| |||||||| || Sbjct 284587 AAGAGTTCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCGGGGGG 284646 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| || || || | || || | ||||| ||||| |||| || || Sbjct 284647 GATGCCCTCCTTGTCCTGAATTTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCAC 284706 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA--TATCTGCATTTTC 283103 ||||| ||||| ||||||||||| | ||||| ||||| ||| || |||||| Sbjct 284707 CTCGAGGGTGATAGTCTTACCCGTAAGGGTCTTCACGAAGCTAT-TGAATTTTC 284759 >seq334 Length=652976 Score = 116 bits (128), Expect = 8e-21 Identities = 136/184 (74%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 230227 TCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATTTTCG 230286 |||||||||| || | |||||| ||| || ||||| ||||| || || ||| | || | Sbjct 129041 TCGGCATGAACGCCAACCTCATGAAGCAGTACATCGAGTTCGTCGCCGACCGTCTATTGG 129100 Query 230287 TGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCA 230346 | || || || ||||||| ||||| | ||| |||||||||| || |||||| || Sbjct 129101 TCGCCCTCGGTAACGAGAAGGTGTACCGCGCCACAAACCCCTTCGACTTCATGGAGAACA 129160 Query 230347 TTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCG 230406 | || ||| || || || ||||||||||| ||||| ||| |||| || || | | ||| Sbjct 129161 TCTCCCTCGGTGGCAAGACCAACTTCTTCGAGAAGCGCGTCGGCGACTACCAGAAGGCCG 129220 Query 230407 GTGT 230410 |||| Sbjct 129221 GTGT 129224 >seq735 Length=540243 Score = 87.8 bits (96), Expect = 4e-12 Identities = 129/175 (74%), Gaps = 6/175 (3%) Strand=Plus/Minus Query 274544 ATCTGTCATGATCATAACATGTCCATACCGAAGCGAGGAAGTATCTTTATACAACTTCCC 274603 ||| | ||||||||| | || ||||||||||| || |||| |||| | ||| | Sbjct 478873 ATCGGCCATGATCATCAGGTGCCCATACCGAAGAGATTTGTTATCGGTATATA-CTTGCT 478815 Query 274604 TGTT-TGAAGCCCAAGAATTTGCTTGA-GAGCGGTGATTTCTTCGTTCTTTGTGATACTC 274661 ||| | || || || | |||||||| | | | |||||||| |||||| |||| || Sbjct 478814 TGTGCTTCAGACCGAGGAATTGCTTGATGTTCTG-GATTTCTTGGTTCTTCATGAT-CTG 478757 Query 274662 GCCACA-GAAGCATCACGTACGTTCAGCAACTTACCGCGGAGAGGGAAAACGCCA 274715 | || ||||||||||| ||||| |||| |||||| || ||||||||||| ||| Sbjct 478756 GTCAATCGAAGCATCACGGACGTTGAGCATCTTACCCCGAAGAGGGAAAACACCA 478702 >seq501 Length=313222 Score = 87.8 bits (96), Expect = 4e-12 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 317028 CGGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACC 317087 |||||| |||||||||| || |||| | ||||||| || || ||||| ||||| Sbjct 113114 CGGGAAACCTTCCAACTTGCCACCGGCAATACTCTTCATCAGAGTGGATTTGCCGGCACC 113055 Query 317088 ATTGGGGCCGCAAAGACCATACCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTCAG 317147 ||| |||| ||||||||||| || | ||||||| || || ||||| ||| Sbjct 113054 GTTGCGGCCACAAAGACCATAGCGGTGTCCCTTCAATAGCCGAAGGTTGGTGTGAGACAG 112995 Query 317148 AAGAATCTTACCACCATATGCCAGAGAGAACTC 317180 ||||| | |||||||||| |||| ||||| || Sbjct 112994 AAGAAGCATACCACCATAGGCCAATGAGAAGTC 112962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046729208547230