Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02-
23] 745 sequences; 39,901,278 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq27 152 4e-32
seq698 138 8e-28
seq737 120 2e-22
>seq27
Length=240170
Score = 152 bits (168), Expect = 4e-32
Identities = 164/215 (76%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||| |||||||| ||||||||||| ||||||||||| |||| ||| ||| |||| ||
Sbjct 62182 CACGAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCGTCCTC 62241
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|| ||||| ||||| ||||||| ||||| || || | || | || ||||| |||
Sbjct 62242 GAGTTGCTTGCCGGCGAAGATCAGTCGCTGTTGGTCGGGGGGGATTCCCTCCTTGTCCTG 62301
Query 44248 TATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305
||||| ||| || ||| | ||||||||| || |||||||| | || || |||
Sbjct 62302 GATCTTGGACTTGACATTGT--CGATGGTGTCGCTCGACTCCACCTCAAGGGTGATAGTC 62359
Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCATGAT 44340
|| |||||||||||||| |||||||| ||||||||
Sbjct 62360 TTGCCCGTGAGGGTCTTGACGAAGATCTGCATGAT 62394
>seq698
Length=460427
Score = 138 bits (152), Expect = 8e-28
Identities = 158/210 (75%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| || ||||||||||| ||||||||||| |||| || ||| |||| ||
Sbjct 203269 ACAAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGACCGTCTTCA 203210
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|| ||||| ||||| || ||||| ||||| || || | || | || ||||| |||
Sbjct 203209 AGTTGCTTTCCGGCGAAAATCAATCGCTGTTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 203150
Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
|||||| ||| || ||| | ||||| || | |||||| ||||| | || || |||||
Sbjct 203149 ATCTTCGACTT-AACGTTGTCGATGGTATCCGAGGATTCGACCTCAAGAGTGATGGTCTT 203091
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||||||||| |||||||| |||||
Sbjct 203090 GCCGGTGAGGGTCTTGACGAAGATCTGCAT 203061
Score = 129 bits (142), Expect = 4e-25
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||| ||| ||||| |||||| ||||||||||| ||| || ||| |||| |||
Sbjct 204014 ACCAAGTGGAGCGTAGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGACCGTCCTCC 203955
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| || || ||||| | ||| || ||||| | ||| | |||||||| |||
Sbjct 203954 AGCTGCTTTCCAGCGAAGATGAGACGTTGTTGATCAGGAGGAATGCCTTCCTTGTCCTGA 203895
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||||| | | |||||||||| ||||| || || | ||||| |||||
Sbjct 203894 ATCTTGCTCTTCACGTTGTCGATGGTGTCGGAAGATTCAACTTCGAGGGTAATTGTCTTC 203835
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| | ||||| || |||||||||||
Sbjct 203834 CCCGTCAATGTCTTGACAAAGATTTGCAT 203806
Score = 123 bits (136), Expect = 2e-23
Identities = 148/199 (74%), Gaps = 4/199 (2%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| |||||||| ||| ||||| ||||||||||| |||| || || | || ||
Sbjct 203558 ACGAGGTGAAGAGTGGATTCCTTCTGGATGTTGTAGTCGGATAGGGTTCGGCCATCCTCA 203499
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| ||||| |||||||| |||||||| || | ||| | || ||||| |||
Sbjct 203498 AGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGA 203439
Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
|||||| ||| || ||| | |||||||||| || || ||||||| || || ||||
Sbjct 203438 ATCTTCGACTTGACATTGT--CGATGGTGTCGGACGACTCGACCTCCAAGGTGATGGTCT 203381
Query 44307 TTCCCGTGAGGGTCTTCAC 44325
|||| || |||||||| ||
Sbjct 203380 TTCCGGTAAGGGTCTTTAC 203362
Score = 93.3 bits (102), Expect = 3e-14
Identities = 148/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| || || |||||| || |||||||| ||| || || | || |||
Sbjct 203786 ACAAGGTGCAGGGTCGACTCCTTCTGAATGTTGTAGTCGCTCAGCGTTCGGCCATCCTCC 203727
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
| |||||| ||||||||||| | || || || || | || | || ||||| |||
Sbjct 203726 AACTGCTTACCGGCAAAGATAAGTCGTTGTTGGTCGGGCGGGATTCCCTCCTTGTCCTGG 203667
Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| | || | ||| | || ||||| | || |||||||| | || || |||||
Sbjct 203666 ATCTTG-GATTTGACGTTGTCGATCGTGTCCGAAGACTCCACCTCAAGGGTGATTGTCTT 203608
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| ||||||||||| ||||||||
Sbjct 203607 GCCAGTGAGAGTCTTCACGAATATTTGCAT 203578
>seq737
Length=337091
Score = 120 bits (132), Expect = 2e-22
Identities = 152/205 (74%), Gaps = 8/205 (4%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG--CGAGTTGGCGCTCGTCGT 44186
|| ||||| || ||| |||||| ||||||||||| |||| ||||| || |||| |
Sbjct 284546 ACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTT--CGGCCGTCCT 284603
Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246
| || ||||| ||||| ||||||| |||||| || || | || | || ||||| |||
Sbjct 284604 CGAGTTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCT 284663
Query 44247 TTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304
|| || ||| || ||| | |||||||||| || |||||||| | || || ||
Sbjct 284664 GAATTTTGGACTTGACATTGT--CGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGT 284721
Query 44305 CTTTCCCGTGAGGGTCTTCACGAAG 44329
||| ||||| |||||||||||||||
Sbjct 284722 CTTACCCGTAAGGGTCTTCACGAAG 284746
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359987131399665
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |