Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq27 152 4e-32 seq698 138 8e-28 seq737 120 2e-22 >seq27 Length=240170 Score = 152 bits (168), Expect = 4e-32 Identities = 164/215 (76%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| |||||||| ||||||||||| ||||||||||| |||| ||| ||| |||| || Sbjct 62182 CACGAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCGTCCTC 62241 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 || ||||| ||||| ||||||| ||||| || || | || | || ||||| ||| Sbjct 62242 GAGTTGCTTGCCGGCGAAGATCAGTCGCTGTTGGTCGGGGGGGATTCCCTCCTTGTCCTG 62301 Query 44248 TATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 ||||| ||| || ||| | ||||||||| || |||||||| | || || ||| Sbjct 62302 GATCTTGGACTTGACATTGT--CGATGGTGTCGCTCGACTCCACCTCAAGGGTGATAGTC 62359 Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCATGAT 44340 || |||||||||||||| |||||||| |||||||| Sbjct 62360 TTGCCCGTGAGGGTCTTGACGAAGATCTGCATGAT 62394 >seq698 Length=460427 Score = 138 bits (152), Expect = 8e-28 Identities = 158/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || ||||||||||| ||||||||||| |||| || ||| |||| || Sbjct 203269 ACAAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGACCGTCTTCA 203210 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| ||||| || ||||| ||||| || || | || | || ||||| ||| Sbjct 203209 AGTTGCTTTCCGGCGAAAATCAATCGCTGTTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 203150 Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 |||||| ||| || ||| | ||||| || | |||||| ||||| | || || ||||| Sbjct 203149 ATCTTCGACTT-AACGTTGTCGATGGTATCCGAGGATTCGACCTCAAGAGTGATGGTCTT 203091 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||||||||| |||||||| ||||| Sbjct 203090 GCCGGTGAGGGTCTTGACGAAGATCTGCAT 203061 Score = 129 bits (142), Expect = 4e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||| ||||| |||||| ||||||||||| ||| || ||| |||| ||| Sbjct 204014 ACCAAGTGGAGCGTAGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGACCGTCCTCC 203955 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || ||||| | ||| || ||||| | ||| | |||||||| ||| Sbjct 203954 AGCTGCTTTCCAGCGAAGATGAGACGTTGTTGATCAGGAGGAATGCCTTCCTTGTCCTGA 203895 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||||| | | |||||||||| ||||| || || | ||||| ||||| Sbjct 203894 ATCTTGCTCTTCACGTTGTCGATGGTGTCGGAAGATTCAACTTCGAGGGTAATTGTCTTC 203835 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| | ||||| || ||||||||||| Sbjct 203834 CCCGTCAATGTCTTGACAAAGATTTGCAT 203806 Score = 123 bits (136), Expect = 2e-23 Identities = 148/199 (74%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || |||||||| ||| ||||| ||||||||||| |||| || || | || || Sbjct 203558 ACGAGGTGAAGAGTGGATTCCTTCTGGATGTTGTAGTCGGATAGGGTTCGGCCATCCTCA 203499 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| |||||||| |||||||| || | ||| | || ||||| ||| Sbjct 203498 AGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGA 203439 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 |||||| ||| || ||| | |||||||||| || || ||||||| || || |||| Sbjct 203438 ATCTTCGACTTGACATTGT--CGATGGTGTCGGACGACTCGACCTCCAAGGTGATGGTCT 203381 Query 44307 TTCCCGTGAGGGTCTTCAC 44325 |||| || |||||||| || Sbjct 203380 TTCCGGTAAGGGTCTTTAC 203362 Score = 93.3 bits (102), Expect = 3e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || || |||||| || |||||||| ||| || || | || ||| Sbjct 203786 ACAAGGTGCAGGGTCGACTCCTTCTGAATGTTGTAGTCGCTCAGCGTTCGGCCATCCTCC 203727 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 | |||||| ||||||||||| | || || || || | || | || ||||| ||| Sbjct 203726 AACTGCTTACCGGCAAAGATAAGTCGTTGTTGGTCGGGCGGGATTCCCTCCTTGTCCTGG 203667 Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| | || | ||| | || ||||| | || |||||||| | || || ||||| Sbjct 203666 ATCTTG-GATTTGACGTTGTCGATCGTGTCCGAAGACTCCACCTCAAGGGTGATTGTCTT 203608 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| ||||||||||| |||||||| Sbjct 203607 GCCAGTGAGAGTCTTCACGAATATTTGCAT 203578 >seq737 Length=337091 Score = 120 bits (132), Expect = 2e-22 Identities = 152/205 (74%), Gaps = 8/205 (4%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG--CGAGTTGGCGCTCGTCGT 44186 || ||||| || ||| |||||| ||||||||||| |||| ||||| || |||| | Sbjct 284546 ACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTT--CGGCCGTCCT 284603 Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246 | || ||||| ||||| ||||||| |||||| || || | || | || ||||| ||| Sbjct 284604 CGAGTTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCT 284663 Query 44247 TTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304 || || ||| || ||| | |||||||||| || |||||||| | || || || Sbjct 284664 GAATTTTGGACTTGACATTGT--CGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGT 284721 Query 44305 CTTTCCCGTGAGGGTCTTCACGAAG 44329 ||| ||||| ||||||||||||||| Sbjct 284722 CTTACCCGTAAGGGTCTTCACGAAG 284746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359987131399665