Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02-
23] 745 sequences; 39,901,278 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq698 167 6e-36
seq737 145 2e-29
seq27 134 3e-26
>seq698
Length=460427
Score = 167 bits (184), Expect = 6e-36
Identities = 166/215 (77%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| |||||||| |||||||| || || || |||||||| |||||||| || |||
Sbjct 203581 CAAATATTCGTGAAGACTCTCACTGGCAAGACAATCACCCTTGAGGTGGAGTCTTCGGAC 203640
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| ||||||||| ||||| |||||||| || |||||||| || ||||| |||
Sbjct 203641 ACGATCGACAACGTCAAATCCAAGATCCAGGACAAGGAGGGAATCCCGCCCGACCAACAA 203700
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||||||||||| ||||| || ||| | || ||||| | || || ||| || ||| |
Sbjct 203701 CGACTTATCTTTGCCGGTAAGCAGTTGGAGGATGGCCGAACGCTGAGCGACTACAACATT 203760
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138
|| || || || || ||||| |||||| | ||||
Sbjct 203761 CAGAAGGAGTCGACCCTGCACCTTGTTCTCCGACT 203795
Score = 134 bits (148), Expect = 3e-26
Identities = 148/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 177933 GTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAG 177992
|| || || || || ||||| || |||||| | ||||| || || |||||||||||
Sbjct 203362 GTAAAGACCCTTACCGGAAAGACCATCACCTTGGAGGTCGAGTCGTCCGACACCATCGAC 203421
Query 177993 AACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATC 178052
|| ||||| |||||||||||||| || || || ||||| |||||||| ||| | |||
Sbjct 203422 AATGTCAAGTCGAAGATTCAGGACAAGGAGGGCATTCCTCCTGACCAGCAGCGATTGATC 203481
Query 178053 TTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAA 178112
|||||||| || ||||| || ||||| | || || |||| || ||| |||| || |||
Sbjct 203482 TTCGCCGGCAAGCAGCTTGAGGATGGCCGAACCCTATCCGACTACAACATCCAGAAGGAA 203541
Query 178113 TCAACACTGCATCTTGT 178129
|| || || || || ||
Sbjct 203542 TCCACTCTTCACCTCGT 203558
Score = 132 bits (146), Expect = 1e-25
Identities = 153/206 (74%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || || ||||| || || || ||||| || ||||| ||| ||| ||
Sbjct 203064 CAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTCGAATCCTCGGAT 203123
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| ||||| || ||||| |||||||| || || ||||| || ||||| ||
Sbjct 203124 ACCATCGACAACGTTAAGTCGAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAACAG 203183
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||| | || ||||||||||| || || ||||| || | |||||| |||| || ||| ||
Sbjct 203184 CGATTGATTTTCGCCGGAAAGCAACTTGAAGACGGTCGCACTCTTTCCGACTACAACATC 203243
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || |||||
Sbjct 203244 CAGAAGGAGAGCACTCTCCACCTTGT 203269
Score = 129 bits (142), Expect = 1e-24
Identities = 154/208 (74%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || || || || | || || || || || |||||||| || ||| || |||
Sbjct 203809 CAAATCTTTGTCAAGACATTGACGGGGAAGACAATTACCCTCGAAGTTGAATCTTCCGAC 203868
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| ||||| || |||||||||||||| ||||| || ||||| || || |||
Sbjct 203869 ACCATCGACAACGTGAAGAGCAAGATTCAGGACAAGGAAGGCATTCCTCCTGATCAACAA 203928
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || |||||||| ||||| ||||| || || || | ||||| ||| || ||| ||
Sbjct 203929 CGTCTCATCTTCGCTGGAAAGCAGCTGGAGGACGGTCGCACTCTGAGCGACTACAACATC 203988
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131
|| || || || || || || |||| ||
Sbjct 203989 CAGAAGGAGTCTACGCTCCA-CTTGGTT 204015
>seq737
Length=337091
Score = 145 bits (160), Expect = 2e-29
Identities = 152/200 (76%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989
|||||||| || || || || || || ||||||||||||||||| || |||||||||
Sbjct 284745 TTCGTGAAGACCCTTACGGGTAAGACTATCACCCTCGAGGTGGAGTCTTCCGACACCATC 284686
Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049
|| || ||||| || ||||||||||| || || ||||| || ||||| || || ||
Sbjct 284685 GACAATGTCAAGTCCAAAATTCAGGACAAGGAGGGCATCCCCCCCGACCAACAGCGTCTG 284626
Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAA 178109
||||||||||| || || ||||| || || | |||||| |||| || ||| |||| ||
Sbjct 284625 ATCTTCGCCGGCAAGCAACTCGAGGACGGCCGAACTCTTTCCGACTACAACATCCAGAAG 284566
Query 178110 GAATCAACACTGCATCTTGT 178129
|| || || || || || ||
Sbjct 284565 GAGTCCACTCTCCACCTCGT 284546
>seq27
Length=240170
Score = 134 bits (148), Expect = 3e-26
Identities = 145/191 (76%), Gaps = 6/191 (3%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980
|| || ||||| || || ||||| || || || |||||||| |||||||| |||
Sbjct 62388 CAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC--- 62332
Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040
||||||||||| || ||||| ||||| |||||||| || |||||||| || |||||
Sbjct 62331 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATCCCCCCCGACCAA 62272
Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100
|| ||||| ||||||||||| || || ||||| || || | ||||| |||| || |||
Sbjct 62271 CAGCGACTGATCTTCGCCGGCAAGCAACTCGAGGACGGCCGCACTCTCTCCGACTACAAC 62212
Query 178101 GTCCAAAAAGA 178111
|||| || ||
Sbjct 62211 ATCCAGAAGGA 62201
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203719710009530
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |