Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq698 167 6e-36 seq737 145 2e-29 seq27 134 3e-26 >seq698 Length=460427 Score = 167 bits (184), Expect = 6e-36 Identities = 166/215 (77%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| |||||||| |||||||| || || || |||||||| |||||||| || ||| Sbjct 203581 CAAATATTCGTGAAGACTCTCACTGGCAAGACAATCACCCTTGAGGTGGAGTCTTCGGAC 203640 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||||||| ||||| |||||||| || |||||||| || ||||| ||| Sbjct 203641 ACGATCGACAACGTCAAATCCAAGATCCAGGACAAGGAGGGAATCCCGCCCGACCAACAA 203700 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||||||||| ||||| || ||| | || ||||| | || || ||| || ||| | Sbjct 203701 CGACTTATCTTTGCCGGTAAGCAGTTGGAGGATGGCCGAACGCTGAGCGACTACAACATT 203760 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 || || || || || ||||| |||||| | |||| Sbjct 203761 CAGAAGGAGTCGACCCTGCACCTTGTTCTCCGACT 203795 Score = 134 bits (148), Expect = 3e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 177933 GTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAG 177992 || || || || || ||||| || |||||| | ||||| || || ||||||||||| Sbjct 203362 GTAAAGACCCTTACCGGAAAGACCATCACCTTGGAGGTCGAGTCGTCCGACACCATCGAC 203421 Query 177993 AACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATC 178052 || ||||| |||||||||||||| || || || ||||| |||||||| ||| | ||| Sbjct 203422 AATGTCAAGTCGAAGATTCAGGACAAGGAGGGCATTCCTCCTGACCAGCAGCGATTGATC 203481 Query 178053 TTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAA 178112 |||||||| || ||||| || ||||| | || || |||| || ||| |||| || ||| Sbjct 203482 TTCGCCGGCAAGCAGCTTGAGGATGGCCGAACCCTATCCGACTACAACATCCAGAAGGAA 203541 Query 178113 TCAACACTGCATCTTGT 178129 || || || || || || Sbjct 203542 TCCACTCTTCACCTCGT 203558 Score = 132 bits (146), Expect = 1e-25 Identities = 153/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || || ||||| || ||||| ||| ||| || Sbjct 203064 CAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTCGAATCCTCGGAT 203123 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || ||||| |||||||| || || ||||| || ||||| || Sbjct 203124 ACCATCGACAACGTTAAGTCGAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAACAG 203183 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | || ||||||||||| || || ||||| || | |||||| |||| || ||| || Sbjct 203184 CGATTGATTTTCGCCGGAAAGCAACTTGAAGACGGTCGCACTCTTTCCGACTACAACATC 203243 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || ||||| Sbjct 203244 CAGAAGGAGAGCACTCTCCACCTTGT 203269 Score = 129 bits (142), Expect = 1e-24 Identities = 154/208 (74%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || || | || || || || || |||||||| || ||| || ||| Sbjct 203809 CAAATCTTTGTCAAGACATTGACGGGGAAGACAATTACCCTCGAAGTTGAATCTTCCGAC 203868 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || |||||||||||||| ||||| || ||||| || || ||| Sbjct 203869 ACCATCGACAACGTGAAGAGCAAGATTCAGGACAAGGAAGGCATTCCTCCTGATCAACAA 203928 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| ||||| ||||| || || || | ||||| ||| || ||| || Sbjct 203929 CGTCTCATCTTCGCTGGAAAGCAGCTGGAGGACGGTCGCACTCTGAGCGACTACAACATC 203988 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131 || || || || || || || |||| || Sbjct 203989 CAGAAGGAGTCTACGCTCCA-CTTGGTT 204015 >seq737 Length=337091 Score = 145 bits (160), Expect = 2e-29 Identities = 152/200 (76%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989 |||||||| || || || || || || ||||||||||||||||| || ||||||||| Sbjct 284745 TTCGTGAAGACCCTTACGGGTAAGACTATCACCCTCGAGGTGGAGTCTTCCGACACCATC 284686 Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049 || || ||||| || ||||||||||| || || ||||| || ||||| || || || Sbjct 284685 GACAATGTCAAGTCCAAAATTCAGGACAAGGAGGGCATCCCCCCCGACCAACAGCGTCTG 284626 Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAA 178109 ||||||||||| || || ||||| || || | |||||| |||| || ||| |||| || Sbjct 284625 ATCTTCGCCGGCAAGCAACTCGAGGACGGCCGAACTCTTTCCGACTACAACATCCAGAAG 284566 Query 178110 GAATCAACACTGCATCTTGT 178129 || || || || || || || Sbjct 284565 GAGTCCACTCTCCACCTCGT 284546 >seq27 Length=240170 Score = 134 bits (148), Expect = 3e-26 Identities = 145/191 (76%), Gaps = 6/191 (3%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980 || || ||||| || || ||||| || || || |||||||| |||||||| ||| Sbjct 62388 CAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC--- 62332 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 ||||||||||| || ||||| ||||| |||||||| || |||||||| || ||||| Sbjct 62331 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATCCCCCCCGACCAA 62272 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || ||||| ||||||||||| || || ||||| || || | ||||| |||| || ||| Sbjct 62271 CAGCGACTGATCTTCGCCGGCAAGCAACTCGAGGACGGCCGCACTCTCTCCGACTACAAC 62212 Query 178101 GTCCAAAAAGA 178111 |||| || || Sbjct 62211 ATCCAGAAGGA 62201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203719710009530