Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq27 179 3e-40 seq737 147 2e-30 seq698 140 3e-28 >seq27 Length=240170 Score = 179 bits (198), Expect = 3e-40 Identities = 179/230 (78%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | ||| || || || |||||||||||||| ||||| ||||||||| Sbjct 62165 CCACCACGGAGGCGGAGCACGAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 62224 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| |||| ||||| |||||||||||||| ||||| ||||||||||| | ||| Sbjct 62225 AGAGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATCAGTCGCTGTTGGTCGGGGGGG 62284 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCA 41813 | | |||||||||| ||| || ||| || | || | |||||||||||||||| Sbjct 62285 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG--ATGGTGTCGCTCGACTCCA 62342 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||| | || || || || ||||| || ||||| ||||| ||||||||| Sbjct 62343 CCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATG 62392 >seq737 Length=337091 Score = 147 bits (162), Expect = 2e-30 Identities = 168/221 (76%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || || ||| ||||||||| ||||| |||||||| Sbjct 284528 CCACCACGGAGACGGAGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAA 284587 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || |||| ||||| |||||||||||||| ||||| ||||||||||| | ||| Sbjct 284588 AGAGTTCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCGGGGGGG 284647 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTT--CAACGACGACACAGTGTCGCTCGACTCC 41812 | || |||||||||| ||| |||| | ||| || | || | |||||| |||||| Sbjct 284648 ATGCCCTCCTTGTCC-TGAATTTTGGACTTGACATTGTCG--ATGGTGTCGGAAGACTCC 284704 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAA 41853 ||||| | || || || |||||||| || ||||| ||||| Sbjct 284705 ACCTCGAGGGTGATAGTCTTACCCGTAAGGGTCTTCACGAA 284745 >seq698 Length=460427 Score = 140 bits (154), Expect = 3e-28 Identities = 174/236 (74%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | || || || || |||||||||||||| ||||| |||||||| Sbjct 203288 GCCACCACGCAGACGGAGGACAAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGA 203229 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || ||||| |||| || || ||||| |||||||| |||| ||||||||||| | ||| Sbjct 203228 AAGAGTGCGACCGTCTTCAAGTTGCTTTCCGGCGAAAATCAATCGCTGTTGGTCAGGGGG 203169 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | || |||||||||| ||| || ||| |||| | | | || || || || | Sbjct 203168 GATGCCCTCCTTGTCCTGGATCTTCGACTT-AACGTTGTCGATGGTATCCGAGGATTCGA 203110 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTTATCG 41869 |||| | || || || || || || || ||||| ||||| |||||||| || ||| Sbjct 203109 CCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATCTTGTCG 203054 Score = 123 bits (136), Expect = 2e-23 Identities = 161/218 (74%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || || ||| |||||||| ||||| |||||||| Sbjct 203576 CCACCACGGAGACGGAGGACGAGGTGAAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAT 203517 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || | || || ||||||||||||||||| |||| ||||| ||||| | ||| Sbjct 203516 AGGGTTCGGCCATCCTCAAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCAGGAGGA 203457 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTT--CAACGACGACACAGTGTCGCTCGACTCC 41812 | || |||||||||| ||| | || | ||| || | || | |||||| |||||| Sbjct 203456 ATGCCCTCCTTGTCC-TGAATCTTCGACTTGACATTGTCG--ATGGTGTCGGACGACTCG 203400 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850 ||||||| || || || || || || || |||||||| Sbjct 203399 ACCTCCAAGGTGATGGTCTTTCCGGTAAGGGTCTTTAC 203362 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| || || | || || ||||| || ||||||||||||||| |||||| Sbjct 203804 CCACCGCGAAGTCGGAGAACAAGGTGCAGGGTCGACTCCTTCTGAATGTTGTAGTCGCTC 203745 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || | || || | |||||| ||||| || || || || |||||||| | || Sbjct 203744 AGCGTTCGGCCATCCTCCAACTGCTTACCGGCAAAGATAAGTCGTTGTTGGTCGGGCGGG 203685 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| || | || | || ||| | | | ||||| |||||||| Sbjct 203684 ATTCCCTCCTTGTCC-TGGATCTTGGATTTGACGTTGTCGATCGTGTCCGAAGACTCCAC 203626 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | || || || || || || || ||||| ||||| || ||||| Sbjct 203625 CTCAAGGGTGATTGTCTTGCCAGTGAGAGTCTTCACGAATATTTGCAT 203578 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462299694794000