Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20EC38_20[genbank_20GCA_5F002120335.1_202017-05-11] 288 sequences; 47,717,833 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq15 145 8e-30 >seq15 Length=993015 Score = 145 bits (160), Expect = 8e-30 Identities = 300/440 (68%), Gaps = 6/440 (1%) Strand=Plus/Plus Query 16955 AACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAA 17014 |||| ||| || ||||| ||| || | |||||||| | || |||||||| || Sbjct 219771 AACAGCAGGCAGGCGAAGTCGGTGTGCAGACCCTCGTCACGCGAAATGAGTTCGTTGGAG 219830 Query 17015 AATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCA 17074 || |||| |||||||| || || ||||| | ||| || || | ||||| | || Sbjct 219831 AAGGTCAGACCGGGCATAAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGCTCCG 219890 Query 17075 GAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCT 17134 ||||| |||||||| |||| || || || || | || | |||| | || | | Sbjct 219891 CTGAAGAAGATACCCTCAACGGCGGCGAAGGCAATAAGACGCTGGGCGAAGGTGGACTTC 219950 Query 17135 TTGTTACGAATCCATTTCTGCACCCACTCGGCTTT-TTGCTTTATGCAATCCATCGTTTC 17193 |||| |||||| | | | |||| ||||| || |||| |||||| || || || Sbjct 219951 TTGTCGGCAATCCAGTGCAGAGCCCAGTCGGCCTTCTTGCGG-ATGCAAGGAATGGTCTC 220009 Query 17194 TATGGCCTTAAATA-ATTTCTCTTTTTCCTGTAGG-TCGATTATATACGTATCGATGAGT 17251 || || || || | || | |||| | | ||| || | || || || || ||||| Sbjct 220010 AATAGCATTGAAGAGATGTGTCTTCTGG--GCAGGCTCCTTGATGTAGGTGTCAATGAGG 220067 Query 17252 AGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGG 17311 || |||| | |||||||| ||||||||||| ||||| || ||||| ||||||||| Sbjct 220068 AGAGAGTACGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGG 220127 Query 17312 GCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCG 17371 || || | || ||||| || | | ||||| || | || |||||||| || |||||| Sbjct 220128 GCCTCTGGGATCTGAACCTCACCAGAAAATCGCTCGACAAGGTTTTCGTTGACAATGCCG 220187 Query 17372 TCGCTCGCGGCGAAAAACGC 17391 ||| |||||||| || || Sbjct 220188 TCGGATGCGGCGAAGAAGGC 220207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517543736835840