Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20EC38_20[genbank_20GCA_5F002120335.1_202017-05-11] 288 sequences; 47,717,833 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq7 127 2e-24 >seq7 Length=1567828 Score = 127 bits (140), Expect = 2e-24 Identities = 415/647 (64%), Gaps = 57/647 (9%) Strand=Plus/Minus Query 145672 AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGG 145731 ||||| | |||||||| || ||||||| || || ||||| || || |||| |||||| Sbjct 114948 AGCTGAACCTTCAGGGCGTCGACGTGGTCGACATACACGTGAGCATCACCCATGACGTGT 114889 Query 145732 ATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAG 145791 | | | || ||| | || | | || |||| ||||| |||||||| | ||| Sbjct 114888 GTCAGGCTGCCTGGCACTAGATCGCACACATGCGCGAGCATGTGTGTCAGCAGCGCGTAA 114829 Query 145792 CTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAG 145851 || || || ||||| || || || || |||||||| | || || ||||| | ||||||| Sbjct 114828 CTTGCGATATTGAACGGGACACCGAGGCCCATGTCGCAGGACCGTTGGTATAACTGGCAG 114769 Query 145852 --GAGA-----------------------------GCTCCCCGCCC---GCC-------- 145869 |||| |||| || | | ||| Sbjct 114768 TGGAGATGGCCCTTTGGCTTGCTCTGGTCCCCATTGCTCTCCTCGCTTTGCCTCGGGAAC 114709 Query 145870 ---ACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGC 145925 ||||||||||| ||| | | |||||| ||||| || |||| ||||||| Sbjct 114708 GAAACGTAGAACTGTGCAAAC-ATGTGGCACGGCGGGAGCACCATCTTCTTCAGGTCCTT 114650 Query 145926 CGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCG---GGGTTCCTCTTGATCTCCCC 145982 ||||||||| |||| |||| | | | || ||| ||||| || | || Sbjct 114649 CGGGTTCCACGCGGAAAGGATCA---TGCGGCGATCGTACGGGTTGTTCCGCAGCTTGTG 114593 Query 145983 TATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTA 146042 ||| | ||| |||||||| ||||| || ||| |||||||| | || || || Sbjct 114592 TATGACGTCGGCCAGCTGGTCGTAACCCTGGCCGGTGTAGTCTGTCTTCGCATCGACATA 114533 Query 146043 CGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCT 146102 | | || |||||||| | ||||||||| ||||| ||||| |||||||| ||| ||| | Sbjct 114532 CTCAGCGCCGAAGTGGCGCCACTGGAAGCCGTAAACGGGACCCAGGTCGCCGACCTCGCG 114473 Query 146103 GTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGAC 146162 | | ||| || | ||||||| || ||||| || ||| |||||||||||||||| Sbjct 114472 TTCCGTCAGTCCCAAGTTGTCGAGGAACTCGCGGGATCCATTGCCGTCCCAGATCTTGAC 114413 Query 146163 GCCC--CTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCT 146220 || |||| |||| | | ||| ||| ||| |||||||||||| ||||| Sbjct 114412 ATCCTGTTCGCTAAGAGATGA--GGACGAGGTGTTTCCCTCGATGAACCAGAGTAGCTCG 114355 Query 146221 TCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGAA 146267 | | ||| | | |||||| | ||| || || || ||||| || Sbjct 114354 GCAATGACGGCGCGTAGGAAGACGCGCTTCGTCGTTAGGAGGGGTAA 114308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590074675723520