Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20EC38_20[genbank_20GCA_5F002120335.1_202017-05-11] 288 sequences; 47,717,833 total letters Query= NC_001824.1 Length=102653 Score E Sequences producing significant alignments: (Bits) Value seq1 111 1e-19 >seq1 Length=3254829 Score = 111 bits (122), Expect = 1e-19 Identities = 136/186 (73%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 12780 AATGGTCATGCGACTAGGAAAGGCATGTGGGTTAATGATTAAATCAGGTACTATGCCATC 12839 ||| ||||| || ||||| ||| |||||||| ||||||||||| || || ||||| || Sbjct 3004120 AATAGTCATACGGGAAGGAATGGCGTGTGGGTTGATGATTAAATCGGGAACGATGCCCTC 3004061 Query 12840 TTTAGTGAAAGGCATGTTTTCTTGGGCATAAATCATACCACAGGTACCTTTTTGTGCGGT 12899 |||||||||||||| ||||||| ||| | | |||| ||| ||||| || || Sbjct 3004060 GCGAGTGAAAGGCATGTCTTCTTGGCGGTAAGTGACACCAATGGTTCCTTTCTGACCGTG 3004001 Query 12900 AAAAGAAGCAAATTTATCTCCTATTTCAGGTATTTTTGGAGATCGTAATTTAATTTTAAC 12959 | ||||||||| || ||||| || | || || || | || ||| | | |||||| || Sbjct 3004000 ACGAGAAGCAAACTTGTCTCCGATCTGGGGGATCTTCGTAGTTCGAACTCGAATTTTGAC 3003941 Query 12960 AATACG 12965 | ||| Sbjct 3003940 GAAACG 3003935 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328363647439552