Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20EC38_20[genbank_20GCA_5F002120335.1_202017-05-11] 288 sequences; 47,717,833 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq14 129 5e-25 seq25 91.5 1e-13 seq52 87.8 2e-12 >seq14 Length=1021207 Score = 129 bits (142), Expect = 5e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||||| || ||||| || || |||||||||||||| | ||||| ||| || Sbjct 858825 ACCAAGTGGAGCGTGGACTCCTTCTGGATGTTGTAATCGCTTAAGGTGCGACCATCTTCC 858884 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || |||||| |||||||||| |||||||| ||||| ||||| |||||||| | Sbjct 858885 AGCTGCTTACCAGCGAAGATGAGACGTTGCTGATCCGGAGGAATGCCTTCCTTGTCCTGA 858944 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | |||| |||||| | || || || | ||| | || || Sbjct 858945 ATCTTGCTCTTCACGTTGTCGATGGTGTCGGAAGATTCAACTTCTAGGGTAATAGTCTTT 859004 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || |||| || || || ||||||||||| Sbjct 859005 CCCGTCAATGTCTTGACGAAAATCTGCAT 859033 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606 ||| || ||||||||||| ||| | |||||| ||||||||||| ||||||||| | Sbjct 859589 CTCCTTCTGAATGTTGTAGTCGGAAAGAGTGCGACCGTCCTCGAGCTGCTTTCCAGCGAA 859648 Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666 || | ||||| || |||||||| || ||||||||||| || || || || | Sbjct 859649 AATCAATCGCTGTTGGTCGGGAGGAATACCCTCCTTGTCCTGGATCTTCGACTTGACGTT 859708 Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726 |||| ||| |||| | |||||||| | || | || ||||| || ||||| || || Sbjct 859709 GTCGATGGTATCCGAGGATTCGACCTCAAGAGTGATGGTCTTGCCAGTGAGAGTCTTGAC 859768 Query 118727 AAAAATCTGCAT 118738 || |||||||| Sbjct 859769 GAAGATCTGCAT 859780 Score = 86.0 bits (94), Expect = 5e-12 Identities = 130/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || || || || || |||||||| ||| || || || |||||| ||||| || || Sbjct 859293 GTCGATTCCTTCTGGATGTTGTAGTCGGACAGGGTTCGGCCATCCTCAAGCTGCTTGCCG 859352 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| | || | |||||||| || ||||| ||||||||||||||| || || ||| Sbjct 859353 GCGAAAATCAATCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCTTGGATCTTCGACTTA 859412 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| |||||| | ||||||||| | || | || || ||||| || || Sbjct 859413 ACATTGTCGATGGTGTCGGACGACTCGACCTCAAGAGTGATGGTCTTTCCGGTAAGGGTC 859472 Query 118722 TTTAC 118726 || || Sbjct 859473 TTGAC 859477 >seq25 Length=676740 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| || || |||||||| ||| | ||| || ||||| || || Sbjct 267257 GTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCGGCCGTCCTCAAGTTG 267198 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || || ||| |||| |||||||| || ||||| || |||||||||||||| || || Sbjct 267197 CTTGCCGGCGAAGATCAGACGCTGTTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTT 267138 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | |||| |||||| | ||| ||||||| ||| | || ||||| || Sbjct 267137 GGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTGCCCGT 267078 Query 118715 CAGAGTTTTTACAAA 118729 || || || || || Sbjct 267077 GAGGGTCTTCACGAA 267063 >seq52 Length=261245 Score = 87.8 bits (96), Expect = 2e-12 Identities = 135/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606 ||| || || |||||||| ||| | ||| || || ||||| || || || ||| | Sbjct 16379 CTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCTTCGAGTTGCTTGCCGGCGAA 16438 Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666 ||| || |||||||| ||||| || || ||||||||||| || || || || | Sbjct 16439 GATCAGTCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTGGACTTGACATT 16498 Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726 |||| |||||| | ||| ||||| | ||| | || ||||| || || || || || Sbjct 16499 GTCGATGGTGTCGCTAGACTCCACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGAC 16558 Query 118727 AAAAATCTGCATG 118739 || ||||||||| Sbjct 16559 GAAGATCTGCATG 16571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433828877255296