Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20EC38_20[genbank_20GCA_5F002120335.1_202017-05-11] 288 sequences; 47,717,833 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq51 307 9e-79 seq15 176 4e-39 seq14 111 1e-19 seq52 86.0 6e-12 >seq51 Length=278824 Score = 307 bits (340), Expect = 9e-79 Identities = 950/1454 (65%), Gaps = 50/1454 (3%) Strand=Plus/Plus Query 22452 GGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACG 22511 |||| || || || |||||||| | | ||| ||||| ||| |||||||| ||| | | Sbjct 148647 GGTTAACGACCTGGAACTCGCCAGCGAGGACACGGCGAGAGTAGATGTTGGAAGTGTAAG 148706 Query 22512 GTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGC-- 22569 | ||||| | |||||||| ||||| ||||| | || || || ||||| || || Sbjct 148707 GCTCGAAGCACTCATTGTTACCCAGGATCTGGGATGTGCTGGCTGTGGGCATAGGGGCGA 148766 Query 22570 -CAACAGTAGCGAGTTTCTCAAGCCGTGCT--TTGAAATTTTACTC-TTGAGCATCGACC 22625 ||||| ||| ||| | || || | | |||| ||| ||| ||||| | | || Sbjct 148767 CCAACA--AGCT-GTTGCGCACACCATTTTGTTTGA---TTTGCTCCTTGAGGCTGGTCC 148820 Query 22626 AGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCC--GCG 22683 ||||||| ||||| || || || ||||| |||||| |||||||| | | ||| ||| Sbjct 148821 AGTCCCAAAGATCCGATGGGGTGACATT---CCACATGTCGTATTGAAGGATGCCCTGCG 148877 Query 22684 ACTCGCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCT 22743 | || || |||||||| || ||| || || | | | |||| || | Sbjct 148878 AGACG--GGAGAACCTTCGTAGGTAGAGTAAGGGCCTTCAACCTTAGCAATCTCCATGGA 148935 Query 22744 CGCCTCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGC--- 22800 ||| ||| ||| | | || || ||||||||||| | ||||||||||| || Sbjct 148936 CGCAGTCAAGGCGGCATGGTAGATCGTCTCGAAGATCTGCTTGTTCAATTGTCTAGCCTC 148995 Query 22801 -GGCGACGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGC 22859 |||||| || | |||||||||| || ||| | ||| || | ||||||||| | Sbjct 148996 TGGCGAC----TCAAAGGGCATACGCAATGCCAAGAATGTGTCAGCAAGACCCTGAACAC 149051 Query 22860 CTATACCGATCGGTCGGTTTTTCAGATTCGACACTTTTGC----CTCGGGCAAAGGATAC 22915 | | || || || |||| | || || || |||| ||| || | || || Sbjct 149052 CAAGGCCAATGGGACGGTGTCGCATGTTG----CTGTTGCGGGCCTCTGGGACGGGGTAA 149107 Query 22916 CAATTCGAATCGATTGTTCTGTTCAAGTTTCTGGTC-ACAATTTTCGTTATNNNNNNNNN 22974 |||| ||| || |||||||||| || || | || | || || | Sbjct 149108 TAATTGACATCAATGATTCTGTTCAAATTG-TGAACGACGACTTGGGTAACCTCATGCAA 149166 Query 22975 NNNNTCAAAGTCGTAAACGCC--CGATTGTA--CAACAAACTTGTTGACGGCGATCGAGG 23030 | ||||| ||| ||| || || || |||| || | | |||| || | Sbjct 149167 CTTCTGGAAGTCATAAGTGCCTTCG-TTATAGTCAACGAAGGAGGGCAACGCGAGGGAAG 149225 Query 23031 CAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGAT 23090 | | ||||| || |||||||| || || | |||||| | || ||||| || |||| Sbjct 149226 CTAAGTTGCAGACAGCCACCTCATCAGGGGCGGAGTACTCGATGATCTCGGTGCAAAGAT 149285 Query 23091 T---GCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCT 23147 | ||| | || || || | ||| |||| || || || || ||||| ||||| Sbjct 149286 TCGAGCTGCGA---ATAGTACCAAGATTCTTCTGATTACTCTTGCGGTTGCAGTGATCCT 149342 Query 23148 TGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAG 23207 |||| |||||| | || | || ||||| ||| | ||||| || || ||||| Sbjct 149343 TGTAAAGCATGAAGGGATTTCCAGTCTCAGTCTGAGCCTCGAGAATGGCGTACCACAGCT 149402 Query 23208 TCTGAGCGTGAACACGTCGCACGTACCTG-CCTTCTTCCTCGTACTTTTGGTACAACGCG 23266 ||||||| | || | || || | | || ||| | |||||||| | ||||| || Sbjct 149403 TCTGAGCCTTAAT-CTTCTGGCGGCCGCGACCCTCTGCTTCGTACTTCTCGTACAGGGCC 149461 Query 23267 TCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTC 23326 || || || | || ||| ||| || || || || ||| | ||||||||||| || Sbjct 149462 TCGAACTCATCGCCATAAACGTCAGCTAGACCAGGGCATTCGTTAGGACACATGAGGGTC 149521 Query 23327 CACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAAC 23386 ||| | | || ||||| || |||| || ||||| || ||||| ||||| ||| Sbjct 149522 CACTCTCCATTCTTCTCAACACGCTTCATGAAGAGATCTGGGATCCAGAGAGCCAGGAAG 149581 Query 23387 AGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAAC 23446 || |||||||| || || ||||| ||||| ||||||| | ||| | || || || Sbjct 149582 AGATCGCGGGCACGAACTTCCTCCTTGCCATGGTTCTTTCGAAGATCAAGGAACTCAAAA 149641 Query 23447 ACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCC 23506 || |||| ||||| |||||||| || | ||| || || || |||||||| ||||| ||| Sbjct 149642 ACATCCGAGTGCCAAGGCTCGAGATAGATGGCGAAAGCACCAGGTCTCTTGTTGCCACCC 149701 Query 23507 TGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGAC 23566 ||||| ||||| | || ||||| ||| | || | |||||| || || | ||||| || Sbjct 149702 TGATCTACGTATCTTGCAGTGTTATTGAAGACACGTAGCATGGGTACAATGCCGTTCGAG 149761 Query 23567 GCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCT 23626 | |||| ||| || | || || | || || | | ||||| || || ||| Sbjct 149762 GTGCCGTTAGTGCCAGCAATGTATGAGCCAGTAGCACGGATGCGGTGAATGTTGAGACCA 149821 Query 23627 ATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCG 23686 || || ||| || || || ||||| || || || || ||||| ||||| ||||| Sbjct 149822 ATACCACCGGCCATCTTGGAGATCATGGCACAGGTCTTGAGGGTGTCATAGATACCCTCA 149881 Query 23687 ATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCG 23746 |||||||| ||||| | |||| | ||| || || || | || || | ||| || | Sbjct 149882 ATGCTGTCGTCTTTCATGTCGACGAGGAAGCAAGACGAGAGCTGGGCCTGGGGTGTTCCA 149941 Query 23747 GCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTG 23806 || ||| || || ||| || || || |||||| | ||||| || ||||| || Sbjct 149942 GCATTGAAGAGAGTTGGGGAAGCATGAGTGAAGTATTTGCTAGACATGAGGTTGTAGGTC 150001 Query 23807 TCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTAT 23866 | ||| | |||| || || || || |||| || || ||||| ||||||| Sbjct 150002 TGAATGACTTTCTCAACATCATCACCCCAGATGCCGACAGCCACACGCATGATCATGTGC 150061 Query 23867 TGAGGTCTCTCGAC 23880 || |||||||| || Sbjct 150062 TGTGGTCTCTCTAC 150075 >seq15 Length=993015 Score = 176 bits (194), Expect = 4e-39 Identities = 549/840 (65%), Gaps = 29/840 (3%) Strand=Plus/Minus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 || ||| | |||||||| ||| ||||| || || ||||| | ||| || | || || Sbjct 220336 ATCTGGCAGATGTACAAGAAGCACGAAGCTTCCTTCTGGACTGCCGAGGAGATTGATCTA 220277 Query 57630 TCTAAGGATCTGAGCGATTGGG---ATTCCCTCAAAGAATCTGAGAGAAATTTT--ATTA 57684 || |||||||| ||||||| | ||| || || | ||||| || | || Sbjct 220276 TCCAAGGATCTCCACGATTGGAGCAACCGCCTAAATGA--CGACGAGAAGTTCTTCATCT 220219 Query 57685 AACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAA 57744 ||| | | || || |||||||||||||| || ||||| ||||| || | ||||| Sbjct 220218 CCCACATTCTCGCCTTCTTCGCCGCATCCGACGGCATTGTCAACGAAAACCTTGTCGAGC 220159 Query 57745 GATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCA 57804 ||||||| || || || | | ||||| ||||||| ||||| || || | | Sbjct 220158 GATTTTCTGGTGAGGTTCAGATCCCAGAGGCCCGATGCTTCTACGGCTTCCAGATCATGA 220099 Query 57805 TTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACG 57864 | || ||| | || || || | ||| || || ||||| || || ||| | ||||| | Sbjct 220098 TGGAGAACATCCACTCCGAGACGTACTCTCTCCTCATTGACACCTACATCAAGGAGCCTG 220039 Query 57865 ACGAGAA-ACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCA 57923 | |||| || | || ||||| || || || || || || ||| ||||||||| Sbjct 220038 CCCAGAAGACACAT-CTCTTCAATGCTATTGAGACCATTCCTTGCATCCGCAAGAAGGCC 219980 Query 57924 GAGTGGTCAATCAAATGGATA----AAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAAT 57979 || ||| | | | ||||| | ||| | | |||| |||||| || | || || Sbjct 219979 GACTGGGCTCTGCACTGGATTGCCGACAAG----AAGTCCACCTTCGCCCAGCGTCTTAT 219924 Query 57980 CGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGAT 58039 || ||||||||||| || ||||| ||||| || ||| || | || || ||| | Sbjct 219923 TGCCTTCGCCGCCGTTGAGGGTATCTTCTTCAGCGGAGCCTTCGCTTCCATCTTCTGGCT 219864 Query 58040 GAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGA 58099 ||||| || || || |||||||| ||||| || |||||| | || ||||| ||||| Sbjct 219863 CAAGAAGCGTGGTCTTATGCCCGGTCTGACCTTCTCCAACGAACTCATTTCGCGTGACGA 219804 Query 58100 GGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGCG 58159 |||||| || || || || || ||||| ||| ||| ||| |||| ||||| | || Sbjct 219803 GGGTCTGCACACCGACTTCGCCTGCCTGCTGTTCTCCCAC---CTCAA-CAACCGTCCCG 219748 Query 58160 ----GGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCA 58215 ||| || | | || |||||||| || ||| | || || | ||||| | | Sbjct 219747 GCAAGGACGTGGTCGAGAAGATCATCACCGATGCCGTCACCATTGAGCAGGAGTTCCTGA 219688 Query 58216 CCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTG 58275 | || || | || ||| | || || |||||| | | ||| ||||||| | Sbjct 219687 CGGAGGCTTTGCCCTGCGCCCTACTAGGCATGAACGCCAACCTCATGAAGCAGTACATCG 219628 Query 58276 AGTTTGTTGCCGACAGACTTTTGCTCGAACT--GATTGGAGAGCGTCATTACAACACGAA 58333 |||| || |||||| | || || | | || | |||| || ||| | | | Sbjct 219627 AGTTCGTCGCCGACCGCCTGCTGGTGGCCCTCGGCAATGAGAAGGT--GTACCGCTCCAC 219570 Query 58334 AAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGAAAA 58393 || || || || |||||| | ||||| || | |||||||| ||||| ||||| || Sbjct 219569 CAACCCCTTCGACTTTATGGAGAACATCTCCCTGGGTGGCAAGACCAACTTCTTCGAGAA 219510 >seq14 Length=1021207 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||| || || ||||| |||||||| | || || || | || Sbjct 859261 ATGCAAATCTTCGTGAAGACCCTCACCGGCAAGACGATCACTCTTGAGGTGGAGTCTTCG 859202 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | |||||| | || |||||||||||| | ||||||||||| Sbjct 859201 GACACGATCGACAACGTCAAATCCAAGATCCAGGACAAGGAAGGAATCCCGCCCGACCAA 859142 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || || || || || || || || |||||||| || || ||||||| || || Sbjct 859141 CAACGACTTATCTTTGCGGGTAAGCAGTTGGAGGATGGCCGAACACTGAGCGACTACAAT 859082 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| || || || ||||| || || || || ||||| | || |||| Sbjct 859081 ATTCAGAAGGAGTCAACTCTGCACCTTGTTCTCAGACTTCGTGGTGGTA 859033 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| ||||| |||| || || || || ||| | || |||||| | ||| Sbjct 859033 ATGCAGATTTTCGTCAAGACATTGACGGGAAAGACTATTACCCTAGAAGTTGAATCTTCC 858974 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || | || ||||||||||||| | || || || ||| Sbjct 858973 GACACCATCGACAACGTGAAGAGCAAGATTCAGGACAAGGAAGGCATTCCTCCGGATCAG 858914 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || ||||| || |||||||| || ||| ||||||| | || | |||||||| ||| Sbjct 858913 CAACGTCTCATCTTCGCTGGTAAGCAGCTGGAAGATGGTCGCACCTTAAGCGATTACAAC 858854 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || || || || || || || |||| || Sbjct 858853 ATCCAGAAGGAGTCCACGCTCCACTTGGTTCT 858822 >seq52 Length=261245 Score = 86.0 bits (94), Expect = 6e-12 Identities = 149/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 31188 CAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAAC 31247 ||| |||||| || ||||| ||||| || || ||||| || |||||| | || || || Sbjct 16575 CAATCATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGT 16516 Query 31248 CGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307 | ||||| |||| | ||||| | || ||||||||| || | || |||| Sbjct 16515 CTAGCGACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATTCCCCCCG 16456 Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATT 31367 |||||||||| || || ||||| ||||| || | |||||| ||| | ||| | Sbjct 16455 ACCAGCAGCGACTGATCTTCGCCGGCAAGCAACTCGAAGACGGCCGTACTCTCTCCGACT 16396 Query 31368 ATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 | ||||| || || || || |||||||| || || Sbjct 16395 ACAACATCCAGAAGGAGAGCACCCTTCATCTCGTCCT 16359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445764795240960