Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20EC38_20[genbank_20GCA_5F002120335.1_202017-05-11] 288 sequences; 47,717,833 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq51 114 3e-20 >seq51 Length=278824 Score = 114 bits (126), Expect = 3e-20 Identities = 189/270 (70%), Gaps = 2/270 (1%) Strand=Plus/Plus Query 94774 TGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTA 94833 |||| || || || | || || || |||||||||| || || ||| || || Sbjct 149807 TGAATGTTGAGACCAATACCACCGGCCATCTTGGAGATCATGGCACAGGTCTTGAGGGTG 149866 Query 94834 TCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGG 94893 ||||| |||||||||||||| || |||| | | | | |||||||| || || || ||| Sbjct 149867 TCATAGATACCCTCAATGCTGTCGTCTTTCATGTCGACGAGGAAGCAAGACGAGAGCTGG 149926 Query 94894 GGTGTGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGAC 94953 | | ||||||| ||| || || || ||||||||||| || || || | || ||| Sbjct 149927 GCCTGGGGTGTTCCAGCATTGAAGAGAGTTGGGGAAGCATGAGTGAAGTATTTGCTAGAC 149986 Query 94954 ATGAGATCATATGTTTCAATGACAGATTTGATGTC-TGATCCGTGAATGCCGACAGCCAC 95012 ||||| | || || | |||||| | | || | | || | |||||||||||||| Sbjct 149987 ATGAGGTTGTAGGTCTGAATGACTTTCTCAACATCATCACCCCAG-ATGCCGACAGCCAC 150045 Query 95013 ACGCATAATCATGTCCTGAGGGCGCTCAAC 95042 |||||| ||||||| ||| || | ||| || Sbjct 150046 ACGCATGATCATGTGCTGTGGTCTCTCTAC 150075 Score = 87.8 bits (96), Expect = 4e-12 Identities = 116/158 (73%), Gaps = 6/158 (4%) Strand=Plus/Plus Query 94399 CCTTCAGCCTCATATTTCTCGTACAACGCCTTAAACTCTTCGCCATGGACGTCGGAAAGG 94458 || || || || || |||||||||| |||| ||||| ||||||| ||||| | || Sbjct 149432 CCCTCTGCTTCGTACTTCTCGTACAGGGCCTCGAACTCATCGCCATAAACGTCAGCTAGA 149491 Query 94459 CCAGGGCACTCGTGGGGGCACATCAGGGACCAATTCTTCCCAGCCTTC---ACTCTCTCC 94515 |||||||| |||| || ||||| |||| ||| | || ||| |||| || | || | Sbjct 149492 CCAGGGCATTCGTTAGGACACATGAGGGTCCACT-CT--CCATTCTTCTCAACACGCTTC 149548 Query 94516 ATGAAGAGATCAGATACCCAGATAGCTGGGAAAAGATC 94553 ||||||||||| | | ||||| ||| |||| ||||| Sbjct 149549 ATGAAGAGATCTGGGATCCAGAGAGCCAGGAAGAGATC 149586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989580348435040