Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20EC38_20[genbank_20GCA_5F002120335.1_202017-05-11] 288 sequences; 47,717,833 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq7 86.0 5e-12 >seq7 Length=1567828 Score = 86.0 bits (94), Expect = 5e-12 Identities = 147/208 (71%), Gaps = 8/208 (4%) Strand=Plus/Minus Query 20889 GGAAACGGACGCGGGG-TCCTCCGCAGCTGAAGCAGCAGGGGATCAACGTGGTTGTTGTA 20947 || ||||| ||||| || | || ||||||| | ||||| || ||||||| | || Sbjct 114972 GGGAACGGCCGCGGTTCTCGTTCG-AGCTGAACCTTCAGGGCGTCGACGTGGTCGACATA 114914 Query 20948 AACGTGGGCGTCACCCAAG--GTGTGCACAAAGTCTCCCGGGGTCAGGCCCGTG-ACGTG 21004 ||||| || ||||||| | ||||| || || || || | | || || || Sbjct 114913 CACGTGAGCATCACCCATGACGTGTGTC---AGGCTGCCTGGCACTAGATCGCACACATG 114857 Query 21005 AGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGGCCCAT 21064 |||| || | ||||| || ||||| || ||||| || |||||||| ||||||||||| Sbjct 114856 CGCGAGCATGTGTGTCAGCAGCGCGTAACTTGCGATATTGAACGGGACACCGAGGCCCAT 114797 Query 21065 GTCGGCGGACCTCTGGTACAGCTGGCAG 21092 |||| ||||| ||||| | ||||||| Sbjct 114796 GTCGCAGGACCGTTGGTATAACTGGCAG 114769 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427774498506240