Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20EC38_20[genbank_20GCA_5F002120335.1_202017-05-11]
288 sequences; 47,717,833 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq14 123 2e-23
>seq14
Length=1021207
Score = 123 bits (136), Expect = 2e-23
Identities = 168/232 (72%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 139535 TGGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCG 139594
|| || || || | ||| | ||| ||||| | ||| ||||| || || ||||| ||||||
Sbjct 858804 TGTCCTCCACGGAGACGGAGAACCAAGTGGAGCGTGGACTCCTTCTGGATGTTGTAATCG 858863
Query 139595 CTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 139654
|| | |||| ||||| ||||| |||||||| |||| |||||||||||||| |||
Sbjct 858864 CTTAAGGTGCGACCATCTTCCAGCTGCTTACCAGCGAAGATGAGACGTTGCTGATCCGGA 858923
Query 139655 GGTATGCCTTCTTTGTCGGTGATTTTTTGT-TTTAGCTGTTCCACTGTGTCGGTGGGCTC 139713
|| |||||||| ||||| ||| | || | || | | || | ||||||| | ||
Sbjct 858924 GGAATGCCTTCCTTGTC-CTGAATCTTGCTCTTCACGTTGTCGATGGTGTCGGAAGATTC 858982
Query 139714 CACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|| || | ||| | ||||| || ||||| || || ||||| || ||||||
Sbjct 858983 AACTTCTAGGGTAATAGTCTTTCCCGTCAATGTCTTGACGAAAATCTGCATA 859034
Score = 105 bits (116), Expect = 7e-18
Identities = 150/211 (71%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 139555 AACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTC 139614
||| | ||| | || ||||| || ||||| || || ||||||| ||| | || ||
Sbjct 859052 AACAAGGTGCAGAGTTGACTCCTTCTGAATATTGTAGTCGCTCAGTGTTCGGCCATCCTC 859111
Query 139615 GAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGT 139674
| ||| ||||| ||| |||| || ||||| || ||||| || || ||||| |||||
Sbjct 859112 CAACTGCTTACCCGCAAAGATAAGTCGTTGTTGGTCGGGCGGGATTCCTTCCTTGTCCTG 859171
Query 139675 GATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTT 139734
||| || ||| | | || | ||||| | | ||||||||||| || | ||||||
Sbjct 859172 GATCTTGGATTTGACGTTGTCGATCGTGTCCGAAGACTCCACCTCAAGAGTGATCGTCTT 859231
Query 139735 GCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|||||| | || || ||||| |||||||||
Sbjct 859232 GCCGGTGAGGGTCTTCACGAAGATTTGCATA 859262
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496062214169600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |