Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20EC38_20[genbank_20GCA_5F002120335.1_202017-05-11] 288 sequences; 47,717,833 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq51 259 7e-64 seq15 154 2e-32 >seq51 Length=278824 Score = 259 bits (286), Expect = 7e-64 Identities = 763/1158 (66%), Gaps = 30/1158 (3%) Strand=Plus/Plus Query 79611 CAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTAT 79670 |||||||| || || | || || || || ||||||| || | | || | || || Sbjct 149212 CAACGCGAGGGAAGCTAAGTTGCAGACAGCCACCTCATCAGGGGCGGAGTACTCGATGAT 149271 Query 79671 TTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 79730 || ||||| || || | ||| || || | ||| | ||||||||||| ||| Sbjct 149272 CTCGGTGCAAAGATTCGAGCTGCGAATAGTACCAAGATTCTTCTGATTACTCTTGCGGTT 149331 Query 79731 ACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGC 79790 || |||||| ||||| ||||| ||| | ||||| ||| |||||| || | ||| || Sbjct 149332 GCAGTGATCCTTGTAAAGCATGAAGGGATTTCCAGTCTCAGTCTGAGCCTCGAGAATGGC 149391 Query 79791 TTTCCAGACGACTC-GAGCCTTTATTATAGACTTGTATCT-CTTTTCTCT--TTCGTA-T 79845 | ||| | | || ||||||| || | || | | | |||| |||||| | Sbjct 149392 GTACCACA-GCTTCTGAGCCTTAATCTT---CTGGCGGCCGCGACCCTCTGCTTCGTACT 149447 Query 79846 TGT-GTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTC 79904 | | ||| | | |||||||| || || |||| || ||| ||||| ||||||| Sbjct 149448 TCTCGTACAGGGCC--TCGAACTCATCGCCATAAACGTCAGCTAGACCAGGGCATTCGTT 149505 Query 79905 AGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAAT 79964 ||||||||| | | ||||||||||| | || || || ||||| |||||||| || || Sbjct 149506 AGGACACATGAGGGTCCACTCTCCATTCTTCTCAACACGCTTCATGAAGAGATCTGGGAT 149565 Query 79965 CCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAG 80024 ||| ||||| | || ||||| | || | | ||||| || || |||||| ||| Sbjct 149566 CCAGAGAGCCAGGAAGAGATCGCGGGCACGAACTTCCTCCTTGCCATGGTTCTTTCGAAG 149625 Query 80025 ATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGG 80084 ||| |||||| | | || ||| || ||||| || || | || ||||| | | | || || Sbjct 149626 ATCAAGGAACTCAAAAACATCCGAGTGCCAAGGCTCGAGATAGATGGCGAAAGCACCAGG 149685 Query 80085 TCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 80144 || ||||| || |||||||||| |||||| || |||||||| | || | | ||| || Sbjct 149686 TCTCTTGTTGCCACCCTGATCTACGTATCTTGCAGTGTTATTGAAGACACGTAGCATGGG 149745 Query 80145 AATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATT 80204 | ||| || || || || || || || || | || || ||| | ||||| || Sbjct 149746 TACAATGCCGTTCGAGGTGCCGTTAGTGCCAGCAATGTATGAGCCAGTAGCACGGATGCG 149805 Query 80205 ACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGT 80264 ||| ||||| || || || ||||| || ||||| | || || || | || Sbjct 149806 GTGAATGTTGAGACCAATACCACCGGCCATCTTGGAGATCATGGCACAGGTCTTGAGGGT 149865 Query 80265 ATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTG 80324 |||||||| ||||| ||||| || || |||||| | || || || || | || Sbjct 149866 GTCATAGATACCCTCAATGCTGTCGTCTTTCATGTCGACGAGGAAGCAAGACGAGAGCTG 149925 Query 80325 GTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGA 80384 | | ||||| ||||| || | || || ||||| || || || |||| ||| Sbjct 149926 GGCCTGGGGTGTTCCAGCATTGAAGAGAGTTGGGGAAGCATGAGTGAAGTATTTGCTAGA 149985 Query 80385 CAGTAGATTGTACGTCTCAATAGCTGATTCTATATC----CCATTGATGAATTCCTACCG 80440 || || ||||| |||| ||| || || | ||| || |||| || || | Sbjct 149986 CATGAGGTTGTAGGTCTGAATGACTTTCTCAACATCATCACCCCAGATG----CCGACAG 150041 Query 80441 CGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGT 80500 | |||||||| | ||||||||| ||||| || || ||||||| | | |||| | || Sbjct 150042 CCACACGCATGATCATGTGCTGTGGTCTCTCTACAATCTTGTCGTCGAGCTTCAGTAGGT 150101 Query 80501 AAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAAT 80558 ||||| |||| ||| || || || || || | ||| ||||| |||| || || | Sbjct 150102 AAGATCGCTCCAGAGTCTTGAAGCCGAAGTATTGGTAGTTGAAA--TCTCTGTCATAGAC 150159 Query 80559 AATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTGATACTT-GAAA 80617 ||| | |||| | | ||||||| | | | || ||| | | | ||| |||| Sbjct 150160 AATGGCAGAGTCAAAGTCTTCCTTATGTCTCATGAC-ACACTCGTATGTCTCCTTAGAAA 150218 Query 80618 TAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATC-CT-CCATCAC 80675 | || ||||| | ||| || || || || ||||||| | | | || || || || Sbjct 150219 TCATAGGAGATGGCTTCTTGTTCTTTGGGTTGACATAGTGGTAGAGGTCGCTGACAACAG 150278 Query 80676 TTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAA 80735 || || | || || || | ||||||||| ||||| ||||| || | ||||| | Sbjct 150279 AAGAC--CATTGCTTCTTCGTCTGCTTGTGTAGGTTTGACACGGCAATACGTGCGGCAAG 150336 Query 80736 AATGGCATAATCTGGATG 80753 |||||||| ||||| || Sbjct 150337 GATGGCATAGTCTGGGTG 150354 >seq15 Length=993015 Score = 154 bits (170), Expect = 2e-32 Identities = 377/568 (66%), Gaps = 10/568 (2%) Strand=Plus/Plus Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010 |||| || || ||||| ||| ||||||||||||||| | ||| ||||||||||| Sbjct 219771 AACAGCAGGCAGGCGAAGTCGGTGTGCAGACCCTCGTCACGCGAAATGAGTTCGTTGGAG 219830 Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070 || || || |||||||| || |||||||| || ||||| || ||||| || || | || Sbjct 219831 AAGGTCAGACCGGGCATAAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGCTCCG 219890 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTG 50130 |||||||| || || || ||||| ||||||| ||| | || | | ||| || Sbjct 219891 CTGAAGAAGATACCCTCAACGGCGGCGAAGGCAATAAGACGCTGGGCGAAGGTGG-ACT- 219948 Query 50131 TCATGT-----ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTT 50185 || ||| ||||| | ||||||| ||||||||||| | ||||| || || | Sbjct 219949 TCTTGTCGGCAATCCAGTGCAGAGCCCAGTCGGCCTTCTTGCGGATGCAAGGAATGGTCT 220008 Query 50186 CTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAA 50245 | || ||||| ||||||| | || | | || || | || || || || | | Sbjct 220009 CAATAGCATTGAAGAGATGTGTCTTCTGGGCAGGCTCCTTGATGTAGGTGTCAATGAGGA 220068 Query 50246 GACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAG 50305 || ||| | || || || ||||| || || ||||| || |||||||| |||| | Sbjct 220069 GAGAGTACGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGGG 220128 Query 50306 CCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGT 50365 |||| | ||||| || || | ||||||| || | | ||||| || || || |||| Sbjct 220129 CCTCTGGGATCTGAACCTCACCAGAAAATCGCTCGACAAGGTTTTCGTTGACAATGCCGT 220188 Query 50366 CACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTA--- 50422 | || || || || || | | || || || || |||| | ||| Sbjct 220189 CGGATGCGGCGAAGAAGGCGAGAATGTGGGAGATGAAGAACTTCTCGTCGTCATTTAGGC 220248 Query 50423 GTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATG 50482 | || ||||||| | || ||| || |||| ||| | || || | ||||| || || | Sbjct 220249 GGTTGCTCCAATCGTGGAGATCCTTGGATAGATCAATCTCCTCGGCAGTCCAGAAGGAAG 220308 Query 50483 CCTCTGCCTTTTTATACATATTCCAGAT 50510 | || ||| || ||||| | |||||| Sbjct 220309 CTTCGTGCTTCTTGTACATCTGCCAGAT 220336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718266214232320