Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20EC38_20[genbank_20GCA_5F002120335.1_202017-05-11] 288 sequences; 47,717,833 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq51 219 6e-52 seq15 154 2e-32 >seq51 Length=278824 Score = 219 bits (242), Expect = 6e-52 Identities = 743/1139 (65%), Gaps = 30/1139 (3%) Strand=Plus/Plus Query 71713 TTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTACTA 71772 || || || || ||||||| || ||| || | || || || ||||||||||| Sbjct 149231 TTGCAGACAGCCACCTCATCAGGGGCGGAGTACTCGATGATCTCGGTGCAAAGATTCGAG 149290 Query 71773 CACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGA 71832 | || || || | ||| | ||||||||||| ||| || |||||| ||||| Sbjct 149291 CTGCGAATAGTACCAAGATTCTTCTGATTACTCTTGCGGTTGCAGTGATCCTTGTAAAGC 149350 Query 71833 ATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGC 71891 || || ||| | ||||| ||| |||||| || | ||| || | ||| | | || |||| Sbjct 149351 ATGAAGGGATTTCCAGTCTCAGTCTGAGCCTCGAGAATGGCGTACCACA-GCTTCTGAGC 149409 Query 71892 CTTTATTATATTCTTGTATCT-CTTTTCTCT--TTCGTA-TTGT-GTATATAATCGTTCG 71946 ||| || |||| | | | |||| |||||| || | ||| | | ||| Sbjct 149410 CTTAATC---TTCTGGCGGCCGCGACCCTCTGCTTCGTACTTCTCGTACAGGGCC--TCG 149464 Query 71947 AACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGACCAC 72006 ||||| || || || | | ||| ||||| ||||| || |||||||| | | |||| Sbjct 149465 AACTCATCGCCATAAACGTCAGCTAGACCAGGGCATTCGTTAGGACACATGAGGGTCCAC 149524 Query 72007 TCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGA 72066 ||||||| | | || || ||||| |||||||| || ||||| ||||| | || ||| Sbjct 149525 TCTCCATTCTTCTCAACACGCTTCATGAAGAGATCTGGGATCCAGAGAGCCAGGAAGAGA 149584 Query 72067 TCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATA 72126 || | || | | ||||| || || |||||| |||||| |||||| | | || | Sbjct 149585 TCGCGGGCACGAACTTCCTCCTTGCCATGGTTCTTTCGAAGATCAAGGAACTCAAAAACA 149644 Query 72127 TCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGA 72186 || || ||||| || || | || ||||| | | | || || | ||||| || |||||| Sbjct 149645 TCCGAGTGCCAAGGCTCGAGATAGATGGCGAAAGCACCAGGTCTCTTGTTGCCACCCTGA 149704 Query 72187 TCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCA 72246 |||| |||||| || |||||||| | || | | ||| || | ||| || || || | Sbjct 149705 TCTACGTATCTTGCAGTGTTATTGAAGACACGTAGCATGGGTACAATGCCGTTCGAGGTG 149764 Query 72247 CCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATT 72306 || || || || | || || ||| | ||||| || | ||| ||||| || Sbjct 149765 CCGTTAGTGCCAGCAATGTATGAGCCAGTAGCACGGATGCGGTGAATGTTGAGACCAATA 149824 Query 72307 CCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATA 72366 || || ||||| || ||||| | || || || | || |||||||| ||||| || Sbjct 149825 CCACCGGCCATCTTGGAGATCATGGCACAGGTCTTGAGGGTGTCATAGATACCCTCAATG 149884 Query 72367 CTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCA 72426 || || || |||||| | || || || || | ||| | ||||| ||| Sbjct 149885 CTGTCGTCTTTCATGTCGACGAGGAAGCAAGACGAGAGCTGGGCCTGGGGTGTTCCAGCA 149944 Query 72427 TTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCA 72486 || || | || || ||||| || || || |||| ||||| || ||||| |||| | Sbjct 149945 TTGAAGAGAGTTGGGGAAGCATGAGTGAAGTATTTGCTAGACATGAGGTTGTAGGTCTGA 150004 Query 72487 ATAGCTGATTCTATATC----CCATTGATGTATTCCTACCGCGACACGCATTAACATATG 72542 || || || | ||| || |||| || || || |||||||| | ||| || Sbjct 150005 ATGACTTTCTCAACATCATCACCCCAGATG----CCGACAGCCACACGCATGATCATGTG 150060 Query 72543 CTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTT 72602 ||| ||||| || || ||||||| | | |||| | ||| ||| |||| ||| || Sbjct 150061 CTGTGGTCTCTCTACAATCTTGTCGTCGAGCTTCAGTAGGTAAGATCGCTCCAGAGTCTT 150120 Query 72603 AAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTA 72660 || || || || | ||| ||||| |||| || || | ||| | || | | | Sbjct 150121 GAAGCCGAAGTATTGGTAGTTGAAA--TCTCTGTCATAGACAATGGCAGAGTCAAAGTCT 150178 Query 72661 TCCTTATATTTGTTAACTATATCCATGGTGATACTT-GAAATAATCGGAGAATGTTTCCC 72719 ||||||| | | | || | | | | | ||| ||||| || ||||| | ||| Sbjct 150179 TCCTTATGTCTCATGAC-ACACTCGTATGTCTCCTTAGAAATCATAGGAGATGGCTTCTT 150237 Query 72720 ATTTTTAGGATTAACATAGTTGAATAAATC-CT-CCATCACTTCACTAAATAGttttttt 72777 || || || || ||||||| | | | || || || || || || | || || Sbjct 150238 GTTCTTTGGGTTGACATAGTGGTAGAGGTCGCTGACAACAGAAGAC--CATTGCTTCTTC 150295 Query 72778 GTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATG 72836 || | ||||||||| ||||| ||||| || | ||||| || |||||||| ||||| || Sbjct 150296 GTCTGCTTGTGTAGGTTTGACACGGCAATACGTGCGGCAAGGATGGCATAGTCTGGGTG 150354 >seq15 Length=993015 Score = 154 bits (170), Expect = 2e-32 Identities = 377/568 (66%), Gaps = 10/568 (2%) Strand=Plus/Plus Query 42056 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAA 42115 |||| || || ||||| ||| |||||||||||| || | ||| | ||||||||| Sbjct 219771 AACAGCAGGCAGGCGAAGTCGGTGTGCAGACCCTCGTCACGCGAAATGAGTTCGTTGGAG 219830 Query 42116 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCA 42175 || || || |||||||| || |||||||| || ||||| || || || || || | ||| Sbjct 219831 AAGGTCAGACCGGGCATAAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGCTCCG 219890 Query 42176 GAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTG 42235 |||||||| || || || || || ||||||||||| | || | || | ||| Sbjct 219891 CTGAAGAAGATACCCTCAACGGCGGCGAAGGCAATAAGACGCTGGGC-GAAGGTGGACT- 219948 Query 42236 TCATGT-----ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTT 42290 || ||| ||||| | ||||||| ||||||||||| | ||||| || || | Sbjct 219949 TCTTGTCGGCAATCCAGTGCAGAGCCCAGTCGGCCTTCTTGCGGATGCAAGGAATGGTCT 220008 Query 42291 CTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAA 42350 | || ||||| ||||||| | || | | || || | || || || || | | Sbjct 220009 CAATAGCATTGAAGAGATGTGTCTTCTGGGCAGGCTCCTTGATGTAGGTGTCAATGAGGA 220068 Query 42351 GACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGG 42410 || ||| | || || || ||||| || || ||||| || |||||||| |||| || Sbjct 220069 GAGAGTACGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGGG 220128 Query 42411 CCTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGT 42470 |||| | | ||| || || | ||||||| || | | |||||||| || || |||| Sbjct 220129 CCTCTGGGATCTGAACCTCACCAGAAAATCGCTCGACAAGGTTTTCGTTGACAATGCCGT 220188 Query 42471 CACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTA--- 42527 | || || || || || | | || || || | || ||||| ||| Sbjct 220189 CGGATGCGGCGAAGAAGGCGAGAATGTGGGAGATGAAGAACTTCTCGTCGTCATTTAGGC 220248 Query 42528 ATTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATG 42587 || ||||||| | || ||| || |||| ||| | || || | ||||| || || | Sbjct 220249 GGTTGCTCCAATCGTGGAGATCCTTGGATAGATCAATCTCCTCGGCAGTCCAGAAGGAAG 220308 Query 42588 CTTCTGCCTTTTTATACATATTCCAGAT 42615 |||| ||| || ||||| | |||||| Sbjct 220309 CTTCGTGCTTCTTGTACATCTGCCAGAT 220336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671136783898880