Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20EC38_20[genbank_20GCA_5F002120335.1_202017-05-11] 288 sequences; 47,717,833 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq8 111 2e-20 seq6 95.1 2e-15 >seq8 Length=1312638 Score = 111 bits (122), Expect = 2e-20 Identities = 86/100 (86%), Gaps = 2/100 (2%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGC-AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||||||| |||||| | || || |||||||| || ||||| ||||| |||| Sbjct 414383 CGCCAAGCGTCATCGCAAGATCT-TGCGTGACAACATCCAGGGTATCACAAAGCCCGCTA 414441 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 |||| ||||| |||||||||||||| ||||||||| |||| Sbjct 414442 TCCGACGTCTTGCTCGTCGTGGTGGTGTCAAGCGTATCTC 414481 >seq6 Length=1578186 Score = 95.1 bits (104), Expect = 2e-15 Identities = 83/101 (82%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || || | ||| |||||| || |||||||| || || |||||||| || || Sbjct 745427 GCCAAGCGCCACCGTAAGAT-TCTTCGTGACAACATCCAGGGTATTACCAAGCCCGCCAT 745485 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 || ||||| |||||||||||||| ||||||||| |||||| Sbjct 745486 TCGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTG 745526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074936679584