Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20EC38_20[genbank_20GCA_5F002120335.1_202017-05-11] 288 sequences; 47,717,833 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq51 356 6e-93 seq15 87.8 5e-12 >seq51 Length=278824 Score = 356 bits (394), Expect = 6e-93 Identities = 1000/1523 (66%), Gaps = 18/1523 (1%) Strand=Plus/Minus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 ||||| || || | ||||| | | |||||||||||| | | | ||| | || ||| Sbjct 149973 TTCACTCATGCTTCCCCAACTCTCTTCAATGCTGGAACACCCCAGGCCCAGCTCTCGTCT 149914 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 ||||| || | | ||||| ||||| ||| |||||||||| |||||| || |||| Sbjct 149913 TGCTTCCTCGTCGACATGAAAGACGACAGCATTGAGGGTATCTATGACACCCTCAAGACC 149854 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC- 363725 ||||| | || ||||||| || || || |||||| | || ||| | ||||| Sbjct 149853 TGTGCCATGATCTCCAAGATGGCCGGTGGTATTGGTCTCAACATTCACCGCATCCGTGCT 149794 Query 363726 ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCG 363785 || | | |||||| ||||| || |||||| || | || |||||||| || Sbjct 149793 ACTGG-CTCATACATTGCTGGCACTAACGGCACCTCGAACGGCATTGTACCCATGCTACG 149735 Query 363786 TGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTT 363845 ||| || | || ||||| || ||||| || |||||||| ||| | || || || Sbjct 149734 TGTCTTCAATAACACTGCAAGATACGTAGATCAGGGTGGCAACAAGAGACCTGGTGCTTT 149675 Query 363846 TGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAA 363905 || || |||||||||||| || | ||| |||||||||| ||||| || || || || Sbjct 149674 CGCCATCTATCTCGAGCCTTGGCACTCGGATGTTTTTGAGTTCCTTGATCTTCGAAAGAA 149615 Query 363906 CACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCA 363965 | || || |||||| | ||||| || ||||| ||| || || ||| | | || | Sbjct 149614 CCATGGCAAGGAGGAAGTTCGTGCCCGCGATCTCTTCCTGGCTCTCTGGATCCCAGATCT 149555 Query 363966 TTTTATGAAGCGCGTGGAGGCAGGTAAGA-ATTGGTCACTCTTTTGCCCACACGAATGTC 364024 || |||||||| || || | || || | ||| | ||| | || || ||||||| | Sbjct 149554 CTTCATGAAGCGTGTTGA-GAAGAATGGAGAGTGGACCCTCATGTGTCCTAACGAATGCC 149496 Query 364025 CAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGG 364084 | ||||| | || || | || || || | | || || ||||| ||||| ||| | | Sbjct 149495 CTGGTCTAGCTGACGTTTATGGCGATGAGTTCGAGGCCCTGTACGAGAAGTACGAAGCAG 149436 Query 364085 AGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGC 364144 |||| | || ||| ||| || |||||||| |||| ||||| | || | | Sbjct 149435 AGGGTCGCGGCCGCCAGAAGATTAAGGCTCAGAAGCTGTGGTACGCCATTCTCGAGGCTC 149376 Query 364145 AGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACC 364204 ||| |||||| |||| |||| ||| | ||||| ||| |||||||||||| || | Sbjct 149375 AGACTGAGACTGGAAATCCCTTCATGCTTTACAAGGATCACTGCAACCGCAAGAGTAATC 149316 Query 364205 AGCAGCACCTTGGTACAATTCAGCAGAGC-AACCTATGTACCGAGATTATTGAATACACC 364263 || || | |||||||| |||| |||| | || || || |||||||| || || ||| || Sbjct 149315 AGAAGAATCTTGGTACTATTC-GCAGCTCGAATCTTTGCACCGAGATCATCGAGTACTCC 149257 Query 364264 GCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT---- 364319 || || || ||| || || || ||| | || || ||||| | || | || || Sbjct 149256 GCCCCTGATGAGGTGGCTGTCTGCAACTTAGCTTCCCTCGCGTTGCCCTCCTTCGTTGAC 149197 Query 364320 --AAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTA--TCATGCTACTT 364375 || || || |||| |||| |||| | | |||| || ||| | || | | | Sbjct 149196 TATAACGAAGGCACTTATGACTTCCAGAAGTTGCATGAGGTTACCCAAGTCGTCGT--TC 149139 Query 364376 GCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTA 364435 |||| | ||| | || || |||||||| || | || || ||| | Sbjct 149138 ACAATTTGAACAGAATCATTGATGTCAATTATTACCCCGTCCCAGAGGCCCGCAACAGCA 149079 Query 364436 ATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGC 364495 | ||||| || || || ||||| |||||||| ||||| || |||||| || || Sbjct 149078 ACATGCGACACCGTCCCATTGGCCTTGGTGTTCAGGGTCTTGCTGACACATTCTTGGCAT 149019 Query 364496 TCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAA 364555 | ||| | ||||| ||||| || ||| | | || ||| ||||||| || || | Sbjct 149018 TGCGTATGCCCTTTGAGTCGCCAGAGGCTAGACAATTGAACAAGCAGATCTTCGAGACGA 148959 Query 364556 TGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTA 364615 | || |||||| ||||||| || || | || || | || ||||||| Sbjct 148958 TCTACCATGCCGCCTTGACTGCGTCCATGGAGATTGCTAAGGTTGAAGGCCCTTACTCTA 148899 Query 364616 CTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGC 364675 | || || || || || | |||||||| | | || | || | ||||||||||| | Sbjct 148898 CCTACGAAGGTTCTCCCGTCTCGCAGGGCATCCTTCAATACGACATGTGGAATGTCACCC 148839 Query 364676 CATCTGTCCGATGGAACTGGGATACGCT-ACGTTCCAACGTTAAGAAGCATGGTACTCGC 364734 |||| | | ||| ||||| | || | | ||| | || | ||||| ||| Sbjct 148838 CATCGGATCTTTGGGACTGGACCAGCCTCAAGGAGCAA-ATCAAACAAAATGGTGTGCGC 148780 Query 364735 AACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAAC 364794 ||| | | | || || |||||||| || || | |||||||| || ||||| Sbjct 148779 AACAGCTTGTTGGTCGCCCCTATGCCCACAGCCAGCACATCCCAGATCCTGGGTAACAAT 148720 Query 364795 GAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTT 364854 ||||||||||| || | || ||| | || || ||||| || || | || || || Sbjct 148719 GAGTGCTTCGAGCCTTACACTTCCAACATCTACTCTCGCCGTGTCCTCGCTGGCGAGTTC 148660 Query 364855 CCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGC 364914 | ||| ||||| | | ||||||| ||| ||| || || ||| ||| ||| Sbjct 148659 CAGGTCGTTAACCCCTGGTTGCTCAAGGACCTTGTTGACATGGGTCTCTGGTCTGATAGC 148600 Query 364915 ATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAA 364974 ||||||||| |||||| |||| ||||| | |||||||| || |||| | Sbjct 148599 ATGAAGAACCGTATCATTGCCGAGGGCGGTTCAATTCAGAACATCCCGAACATTCCTGCT 148540 Query 364975 GATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATG 365034 ||| | ||| || ||||||| ||||| |||||||| ||| |||||| | | | ||| Sbjct 148539 GATATCAAGGCTCTTTACAAGACCGTCTGGGAAATCTCCCAACGAACTGTTGTCCAGATG 148480 Query 365035 GCGGCCGATCGCGGTGCTTTTAT 365057 || || || || ||||| || || Sbjct 148479 GCCGCTGACCGTGGTGCGTTCAT 148457 >seq15 Length=993015 Score = 87.8 bits (96), Expect = 5e-12 Identities = 152/217 (70%), Gaps = 7/217 (3%) Strand=Plus/Minus Query 22438 AATAAGGCAGATTGGGCGCTGAAATGGATGA---ACAATGAACGTTCA--TTCGCGGAAC 22492 || ||||| || ||||| ||| | ||||| |||| ||| || || ||||| | | Sbjct 219988 AAGAAGGCCGACTGGGCTCTGCACTGGATTGCCGACAA-GAA-GTCCACCTTCGCCCAGC 219931 Query 22493 GTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCT 22552 |||||||||| || || | ||||| || || ||||| ||||| || | | |||| Sbjct 219930 GTCTTATTGCCTTCGCCGCCGTTGAGGGTATCTTCTTCAGCGGAGCCTTCGCTTCCATCT 219871 Query 22553 TTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCC 22612 | ||||| || || |||| ||||||| ||||| || || || || || | ||| | Sbjct 219870 TCTGGCTCAAGAAGCGTGGTCTTATGCCCGGTCTGACCTTCTCCAACGAACTCATTTCGC 219811 Query 22613 GAGATGAGGGTCTTCATACCGATTTTGCGTGTATGCT 22649 | || |||||||| || ||||| || || || |||| Sbjct 219810 GTGACGAGGGTCTGCACACCGACTTCGCCTGCCTGCT 219774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303348790625216