Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20EC38_20[genbank_20GCA_5F002120335.1_202017-05-11] 288 sequences; 47,717,833 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq14 84.2 2e-11 >seq14 Length=1021207 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || |||| || |||||||||||||| || |||||||| ||| Sbjct 858807 CCTCCACGGAGACGGAGAACCAAGTGGAGCGTGGACTCCTTCTGGATGTTGTAATCGCTT 858866 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | || |||| || || || || | || || || || || ||| ||| Sbjct 858867 AAGGTGCGACCATCTTCCAGCTGCTTACCAGCGAAGATGAGACGTTGCTGATCCGGAGGA 858926 Query 16829 ACGCCCTCTTTGTCGGCAAT-TTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGT 16887 | ||| || ||||| ||| ||||| |||||| | | | | |||||| | || Sbjct 858927 ATGCCTTCCTTGTCCTGAATCTTGCT-CTTCACGTTGTCGATGGTGTCGGAAGATTCAAC 858985 Query 16888 TTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||| | ||| || || ||||| |||| || ||||| ||||||||||| Sbjct 858986 TTCTAGGGTAATAGTCTTTCCCGTCAATGTCTTGACGAAAATCTGCAT 859033 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405086578141120