Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20EC38_20[genbank_20GCA_5F002120335.1_202017-05-11] 288 sequences; 47,717,833 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq15 170 2e-37 >seq15 Length=993015 Score = 170 bits (188), Expect = 2e-37 Identities = 381/563 (68%), Gaps = 13/563 (2%) Strand=Plus/Plus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 ||| || |||||||| || | ||| ||||| || || || | || ||| ||| || | Sbjct 219779 GCAGGCGAAGTCGGTGTGCAGACCCTCGTCACGCGAAATGAGTTCGTTGGAGAAGGTCAG 219838 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 ||| || | || || || ||||||||||| || || ||||| || || || || Sbjct 219839 ACCGGGCATAAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGCTCCGCTGAAGAA 219898 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCT 93270 ||||| || ||||| || || || | || ||| | ||| || | ||| || || Sbjct 219899 GATACCCTCAACGGCGGCGAAGGCAATAAGACGCTGGGCGAA---GGTGGACTTCTTGTC 219955 Query 93271 G---ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGC 93327 | ||||| | | |||||| ||||| || || || ||||| | || || ||||| Sbjct 219956 GGCAATCCAGTGCAGAGCCCAGTCGGCCTTCTTGCGGATGCAAGGAATGGTCTCAATAGC 220015 Query 93328 GTTAAATAGGT-AATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAAT 93386 || || || | ||| || | | | || ||||| || || || | ||||| | Sbjct 220016 ATTGAAGAGATGTGTCT-TCTGGGCAGGCTCCTTGATGTAGGTGTCAATGAGGAGAGAGT 220074 Query 93387 ACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCG 93446 || | || || |||| |||||||| || ||||| |||||||| |||| || || | Sbjct 220075 ACGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGGGCCTCTG 220134 Query 93447 TGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATG 93506 |||||| || || |||||||| ||| || || ||||| ||||| || || ||||||| Sbjct 220135 GGATCTGAACCTCACCAGAAAATCGCTCGACAAGGTTTTCGTTGACAATGCCGTCGGATG 220194 Query 93507 CTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATC-TTTAAGC--TTAT 93563 | || || || || | || || || || ||||| || || |||| || || Sbjct 220195 CGGCGAAGAAGGCGAGAATGTGGGAGATGAAGAACTTCTCGTCGTCATTTAGGCGGTTGC 220254 Query 93564 CCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTC-T 93622 ||||||| ||||| || || ||||| | || ||| ||||||| || || ||||| | Sbjct 220255 TCCAATCGTGGAGATCCTTGGATAGATCAATCTCCTCGGCAGTCCAGAAGGAAGCTTCGT 220314 Query 93623 GCTTTTTTGTACATATCCCATAT 93645 || || |||||||| | ||| || Sbjct 220315 GC-TTCTTGTACATCTGCCAGAT 220336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556858795301120