Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20EC38_20[genbank_20GCA_5F002120335.1_202017-05-11] 288 sequences; 47,717,833 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq15 118 2e-21 >seq15 Length=993015 Score = 118 bits (130), Expect = 2e-21 Identities = 140/187 (75%), Gaps = 2/187 (1%) Strand=Plus/Minus Query 243568 GGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATC 243627 ||||||||| | | |||||| ||||||||||| ||||| ||||||||| | | | Sbjct 219661 GGCATGAACGCCAACCTCATGAAGCAGTACATCGAGTTCGTCGCCGACCGCCTGCTGGTG 219602 Query 243628 GCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATT 243687 || || || ||||||| |||||| ||||| |||||||| | |||||||||| ||| Sbjct 219601 GCCCTCGGCAATGAGAAGGTGTACCGCTCCACCAACCCCTTCGACTTTATGGAGAACATC 219542 Query 243688 TCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA-ACGCCCTGG 243746 || || || || || ||||||||||| ||||| || ||||||| || | | || || Sbjct 219541 TCCCTGGGTGGCAAGACCAACTTCTTCGAGAAGCGCGTTGGTGATTACCAGAAGGCC-GG 219483 Query 243747 TGTGATG 243753 ||| ||| Sbjct 219482 TGTCATG 219476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102875930372800