Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20EC38_20[genbank_20GCA_5F002120335.1_202017-05-11] 288 sequences; 47,717,833 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq51 185 1e-41 seq15 131 2e-25 >seq51 Length=278824 Score = 185 bits (204), Expect = 1e-41 Identities = 843/1312 (64%), Gaps = 31/1312 (2%) Strand=Plus/Plus Query 113915 AACTCACCCGCGAGGGTGCGTCTCAGA-TAGATATTGGTCGTGTATGGCTCAAAGCACTC 113973 ||||| || |||||| || | ||| ||||| |||| ||||| ||||| |||||||| Sbjct 148661 AACTCGCCAGCGAGGACACGGCG-AGAGTAGATGTTGGAAGTGTAAGGCTCGAAGCACTC 148719 Query 113974 ATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 114033 ||||||||||| ||| |||| ||| |||||||||||| || || | | | |||||| Sbjct 148720 ATTGTTACCCAGGATCTGGGATGTGCTGGCTGTGGGCATAGGGGCGACCAACAAGCTGTT 148779 Query 114034 ACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGT 114093 || | ||| |||| | || | ||||||||| | |||||| | | || Sbjct 148780 GCGCACACCATTTTGTTTGATTTGCTCCTTGAGGCTGGTCCAGTCCCAAAGATCCGATGG 148839 Query 114094 CTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGT 114153 | | |||||| || | || ||||| || || ||| | || || || || | || Sbjct 148840 GGTGACATTCCACATGTCGTATTGAAGGATGCCCTGCGAGACGGGAGAACCTTCGTAGGT 148899 Query 114154 CTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACAT 114213 ||| ||||| ||||||| || | || | ||| | ||| || || || || Sbjct 148900 AGAGTAAGGGCCTTCAACCTTAGCAATCTCCATGGACGCAGTCAAGGCGGCATGGTAGAT 148959 Query 114214 TGTCTCAAAAATGCGAGCATTCA-TTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGC 114272 ||||| || || | |||| ||| || | |||| || ||||| | | || Sbjct 148960 CGTCTCGAAGATCTGCTTGTTCAATTGTCTAG-CCTCTGGCGACTCAAAGGGCATACGCA 149018 Query 114273 ACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATAT 114332 | | ||| || || ||||| || ||||| |||||||| || || |||| ||| | Sbjct 149019 ATGCCAAGAATGTGTCAGCAAGACCCTGAACACCAAGGCCAATGGGACGGTGTCGCATGT 149078 Query 114333 TAGACTTTCGAGCGGTCTCC-ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTT 114391 | || || || ||| ||||| ||| |||| ||| || | || || | ||| Sbjct 149079 TGCTGTTGCGGGCC-TCTGGGACGGGGTAATAATTGACATCAATGATTCTGTTCAAATTG 149137 Query 114392 TTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCA 114451 | ||| || | || | ||||| | ||| | | | ||| || ||| || | | Sbjct 149138 TGAACGACGACTTGGGTAACCTCATGCAACTTCTGGAAGTCATAAGTGCCT---TCGTTA 149194 Query 114452 TTGACATACTTAGGAAGG----GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTT 114507 | | || || |||| || |||| || || | || || |||| |||||| Sbjct 149195 TAGTCA-ACGAAGGAGGGCAACGCGAGGGAAGCTAAGTTGCAGACAGCCACCTCATCAGG 149253 Query 114508 ATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTT 114567 | | |||||| || || || || || | ||| || || ||| || || | ||||| Sbjct 149254 GGCGGAGTACTCGATGATCTCGGTGCAAAGATTCGAGCTGCGAATAGTACCAAGATTCTT 149313 Query 114568 TTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGT 114627 ||||| ||| ||| || |||||||||||||||| | || | || ||||| || Sbjct 149314 CTGATTACTCTTGCGGTTGCAGTGATCCTTGTAAAGCATGAAGGGATTTCCAGTCTCAGT 149373 Query 114628 TTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAG-TGGCGTTGGCTCGC 114685 || | || |||||| || | ||| | | || | | || | ||||| | | || Sbjct 149374 CTGAGCCTCGAGAATGGCGTACCACAGCTTCTGAGCCTTAATCTTCTGGCG--GCCGCGA 149431 Query 114686 CCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGC 114745 ||||| | |||||||| ||| ||||| || ||||| || || | || | || Sbjct 149432 CCCTCTGCTTCGTACTTCTCGTACAGGGCCTCGAACTCATCGCCATAAACGTCAGCTAGA 149491 Query 114746 CCTGGTGCCTTATCTGGG-CAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCAT 114804 || || || || | || || | ||| | ||| | ||| || ||||||||||||||| Sbjct 149492 CCAGG-GCATTCGTTAGGACACATGAGGGTCCACTCTCCATTCTTCTCAACACGCTTCAT 149550 Query 114805 GAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCC 114864 |||||| ||||||||||||||||| ||||||||| || ||| |||| || | || Sbjct 149551 GAAGAGATCTGGGATCCAGAGAGCCAGGAAGAGATCGCGGGCACGAACTTCCTCCTTGCC 149610 Query 114865 CTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACAC 114924 || || || | || | || || | | ||||| |||||| || || || || | Sbjct 149611 ATGGTTCTTTCGAAGATCAAGGAACTCAAAAACATCCGAGTGCCAAGGCTCGAGATAGAT 149670 Query 114925 CGCGATTG-ACC---CCTTACGACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAA 114980 |||| | ||| || | | ||| |||| | ||| || || || ||| ||| | Sbjct 149671 GGCGAAAGCACCAGGTCTCTTGTTG-CCACCCTGATCTACGTATCTTGCAGTGTTATTGA 149729 Query 114981 ATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAA--TACGAGA 115038 | || || ||||| || | || || | || ||| || || || || || ||| Sbjct 149730 AGACACGTAGCATGGGTACAATGCCGTTCGAGGTGCCGTTAGTGCCAGCAATGTATGAGC 149789 Query 115039 CTTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTG 115098 | | | || | || || |||| | ||||||||| || ||| ||| ||||| Sbjct 149790 C--AGTAGCACGGATGCGGTGAATGTTGAGACCAATACCACCGGCCATCTTGGAGATCAT 149847 Query 115099 CGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAG 115158 || || | |||| || | ||||| || || || ||| | || | ||| || Sbjct 149848 GGCACAGGTCTTGAGGGTGTCATAGATACCCTCAATGCTGTCGTCTTTCATGTCGACGAG 149907 Query 115159 GAAGCAGCTCGACATTTGTGGCCT-TGGTGTACCAGCGTTGAAGAGGGTTGG 115209 |||||| ||| | || ||||| ||||| ||||| |||||||| ||||| Sbjct 149908 GAAGCAAGACGAGAGCTG-GGCCTGGGGTGTTCCAGCATTGAAGAGAGTTGG 149958 >seq15 Length=993015 Score = 131 bits (144), Expect = 2e-25 Identities = 343/514 (67%), Gaps = 17/514 (3%) Strand=Plus/Plus Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117 ||| |||||||||||||| || |||||||| || |||||| ||| || ||||| ||||| Sbjct 219794 GTGCAGACCCTCGTCACGCGAAATGAGTTCGTTGGAGAAGGTCAGACCGGGCATAAGACC 219853 Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177 |||||||| | |||||| || | | || | || ||||||||| ||||| || Sbjct 219854 ACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGCTCCGCTGAAGAAGATACCCTCAACGGC 219913 Query 126178 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACT--TTGT-GTCAAACCACTTCAT 126234 ||||| |||| ||||||| || |||| | |||| |||| | ||| ||| | || Sbjct 219914 GGCGAAGGCAATAAGACGCTGGGCGAAGGTG---GACTTCTTGTCGGCAATCCAGTGCAG 219970 Query 126235 CGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTT 126294 ||||| | ||||| || ||| || || | ||||| || || | ||||| | | Sbjct 219971 AGCCCAGTCGGCCTTCTTGCGGATGCAAGGAATGGTCTCAATAGCATTGAAGAGATGTGT 220030 Query 126295 CTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGAC 126354 ||| | | || || |||||||| | || ||||| || || || ||| ||||| Sbjct 220031 CTTCTGGGCAGGCTCCTTGATGTAGGTGTCAATGAGGAGAGAGTACGTCTCGGAGTGGAT 220090 Query 126355 CAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCAT 126413 | | ||| || | ||| | ||||||| | || || || ||||| |||||| Sbjct 220091 GTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCATCGGGCCTCTGGGATCTGAACCTCAC 220149 Query 126414 CGGCAAAATTGTTATTGATA---TTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACG 126470 | | ||||| | | || | || || ||||| || ||||| | || || || | Sbjct 220150 CAG-AAAATCG--CTCGACAAGGTTTTCGTTGACAATGCCGTCGGATGCGGCGAAGAAGG 220206 Query 126471 CCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCAA 126527 | || || | ||||| || || | || || | || | |||| |||| | Sbjct 220207 CGAGAATGTGGGAGATGAAGAACTTCTCGTCGTCATTTAGGCGGTTGCTCCAATCGTGGA 220266 Query 126528 GATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561 ||||||| || ||||| | |||||| |||||||| Sbjct 220267 GATCCTTGGATAGATCAATCTCCTCGGCAGTCCA 220300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597351449527040