Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20EC38_20[genbank_20GCA_5F002120335.1_202017-05-11] 288 sequences; 47,717,833 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq51 185 9e-42 >seq51 Length=278824 Score = 185 bits (204), Expect = 9e-42 Identities = 491/738 (67%), Gaps = 14/738 (2%) Strand=Plus/Minus Query 93896 CCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT-G 93954 |||| || || ||||| || || || || | | ||| | || || || ||||| | | Sbjct 149960 CCCCAACTCTCTTCAATGCTGGAACACCCCAGGCCCAGCTCTCGTCTTGCTTCCTCGTCG 149901 Query 93955 ACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATC 94014 || | || | |||| ||| || || | |||| ||||||| |||||| | ||| Sbjct 149900 AC-ATGAAAGACGACAGCATTGAGGGTATCTATGACACCCTCAAGACCTGTGCCATGATC 149842 Query 94015 TCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTAC 94074 || || || || || || || ||| | ||| | | ||||| | || || ||| Sbjct 149841 TCCAAGATGGCCGGTGGTATTGGTCTCAACATTCACCGCATCCGTGCTACTGGCTCATAC 149782 Query 94075 ATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAAC 94134 || || || || |||||||| |||||| | || || ||||| || |||||||| ||| Sbjct 149781 ATTGCTGGCACTAACGGCACCTCGAACGGCATTGTACCCATGCTACGTGTCTTCAATAAC 149722 Query 94135 GCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTC 94194 | || | ||||| || |||||||| | ||| ||| ||||||| |||||||| Sbjct 149721 ACTGCAAGATACGTAGATCAGGGTGGCAACAAGAGACCTGGTGCTTTCGCCATCTATCTC 149662 Query 94195 GAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGAT 94254 ||||| |||||| |||| || | ||| | || || ||||||||||| ||||| || Sbjct 149661 GAGCCTTGGCACTCGGATGTTTTTGAGTTCCTTGATCTTCGAAAGAACCATGGCAAGGAG 149602 Query 94255 CTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGC 94314 | | ||| | || |||||| ||||||||| | ||||| || || ||||| || Sbjct 149601 GAAGTTCGTGCCCGCGATCTCTTCCTGGCTCTCTGGATCCCAGATCTCTTCATGAAGCGT 149542 Query 94315 GTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC 94374 || ||||| || | |||| || | ||||| || ||||| || || || | ||| Sbjct 149541 GTTGAGAAGAATGGAGAGTGGACCCTCATGTGTCCTAACGAATGCCCTGGTCTAGCTGAC 149482 Query 94375 GTTTGTGG--ATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGG-CAAGGCC 94431 |||| ||| || | ||| || | | |||| | |||||| | |||| | |||| Sbjct 149481 GTTTATGGCGAT-GAGTTC-GAGGCCCTGTACGAGAAGTACGAAGCAGAGGGTCGCGGCC 149424 Query 94432 AG--GAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGA 94489 |||| ||| || || |||||||||| | || | || | ||| |||| Sbjct 149423 GCCAGAAGATTAAGG---CTCAGAAGCTGTGGTACGCCATTCTCGAGGCTCAGACTGAGA 149367 Query 94490 CGGGTACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCAC 94548 | || | |||| ||| | | |||||| | ||| |||| |||| || ||| || | Sbjct 149366 CTGGAAATCCCTTCATGCTTTACAAGGATCACTG-CAACCGCAAGAGTAATCAGAAGAAT 149308 Query 94549 CTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGAC 94608 || || || ||||||||||| ||||||||||| ||||||| | | || || Sbjct 149307 CTTGGTACTATTCGCAGCTCGAATCTTTGCACCGAGATCATCGAGTACTCCGCCCCTGAT 149248 Query 94609 GAGATTGCTGTGTGTAAC 94626 ||| | ||||| || ||| Sbjct 149247 GAGGTGGCTGTCTGCAAC 149230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494721418996480