Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20EC38_20[genbank_20GCA_5F002120335.1_202017-05-11] 288 sequences; 47,717,833 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq51 174 2e-38 seq15 140 4e-28 >seq51 Length=278824 Score = 174 bits (192), Expect = 2e-38 Identities = 941/1476 (64%), Gaps = 45/1476 (3%) Strand=Plus/Plus Query 115719 GATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTG 115778 ||||||||| || || |||| || ||| |||||| | || || | | ||| || || Sbjct 148504 GATTTCCCAGACGGTCTTGTAAAGAGCCTTGATATCAGCAGGAATGTTCGGGATGTTCTG 148563 Query 115779 GATAGAGCCACCTGCCTTGACCATGAGATCCTTCAT-ATCCTTT--GACCAGAGACCAAT 115835 || || || || || | | |||| | ||| | || || | ||||||||||| || Sbjct 148564 AATTGAACCGCC---CTCGGCAATGATACGGTTCTTCATGCTATCAGACCAGAGACCCAT 148620 Query 115836 CTTCTTGAGATCCT----CCACGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGG 115891 | || |||| | || ||| | || || || ||||| || |||||| Sbjct 148621 GTCAACAAGGTCCTTGAGCAACCAGGGG----TTAACGACCTGGAACTCGCCAGCGAGGA 148676 Query 115892 TGCGTCTCAGA-TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATT 115950 || | ||| |||||||||| ||||| ||||| ||||||||||||||||||| ||| Sbjct 148677 CACGGCG-AGAGTAGATGTTGGAAGTGTAAGGCTCGAAGCACTCATTGTTACCCAGGATC 148735 Query 115951 TGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCC 116010 |||| |||| |||||||||||| || || | | | ||||||||| | ||| Sbjct 148736 TGGGATGTGCTGGCTGTGGGCATAGGGGCGACCAACAAGCTGTTGCGCACACCATTTTGT 148795 Query 116011 CTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTCCCACATA 116070 | || | ||||||||| | |||||| | | || | | |||||| Sbjct 148796 TTGATTTGCTCCTTGAGGCTGGTCCAGTCCCAAAGATCCGATGGGGTGACATTCCACATG 148855 Query 116071 TCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCA 116130 || | || ||||| || || || | || || || || | || || ||||| ||| Sbjct 148856 TCGTATTGAAGGATGCCCTGCGAGACGGGAGAACCTTCGTAGGTAGAGTAAGGGCCTTCA 148915 Query 116131 ACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGA 116190 |||| || | || | ||| | ||| || || || || ||||| || || | Sbjct 148916 ACCTTAGCAATCTCCATGGACGCAGTCAAGGCGGCATGGTAGATCGTCTCGAAGATCTGC 148975 Query 116191 GCATTCA-TTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATC 116249 |||| ||| || | |||| || ||||| | | ||| | | ||| || Sbjct 148976 TTGTTCAATTGTCTAG-CCTCTGGCGACTCAAAGGGCATACGCAATGCCAAGAATGTGTC 149034 Query 116250 CGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGT 116309 || ||||| || ||||| |||||||| || || |||| ||| || || || || | Sbjct 149035 AGCAAGACCCTGAACACCAAGGCCAATGGGACGGTGTCGCATGTTGCTGTTGCGGGCC-T 149093 Query 116310 CTCC-ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTG 116368 || ||||| ||| |||| ||| || | || || | ||| | ||| || | | Sbjct 149094 CTGGGACGGGGTAATAATTGACATCAATGATTCTGTTCAAATTGTGAACGACGACTTGGG 149153 Query 116369 TGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAA 116428 | | ||||| | ||| | | | ||| || ||| || | || | || || |||| Sbjct 149154 TAACCTCATGCAACTTCTGGAAGTCATAAGTGCCT---TCGTTATAGTCA-ACGAAGGAG 149209 Query 116429 GG----GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 116484 || |||| || || | || || |||| |||||| | | |||||| || Sbjct 149210 GGCAACGCGAGGGAAGCTAAGTTGCAGACAGCCACCTCATCAGGGGCGGAGTACTCGATG 149269 Query 116485 ATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 116544 || || || || | ||| || || ||| || || | ||||| ||||| ||| | Sbjct 149270 ATCTCGGTGCAAAGATTCGAGCTGCGAATAGTACCAAGATTCTTCTGATTACTCTTGCGG 149329 Query 116545 TTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 116604 || || ||||||||| ||||| | || | || ||||| || || | || |||||| Sbjct 149330 TTGCAGTGATCCTTGTAAAGCATGAAGGGATTTCCAGTCTCAGTCTGAGCCTCGAGAATG 149389 Query 116605 GCCTTCCATA-CATCGGCGGCTGGCACAG-TGGCGTTGGCTCGCCCCTCCTCCTCGTACT 116662 || | ||| | | || | | || | ||||| | | || ||||| | ||||||| Sbjct 149390 GCGTACCACAGCTTCTGAGCCTTAATCTTCTGGCG--GCCGCGACCCTCTGCTTCGTACT 149447 Query 116663 TTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCT- 116721 | ||| |||||||| ||||| || || | | || | || || || || || | Sbjct 149448 TCTCGTACAGGGCCTCGAACTCATCGCCATAAACGTCAGCTAGACCAGG-GCATTCGTTA 149506 Query 116722 GGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATC 116781 ||||| | ||| | ||| | ||| || |||||| |||||||||||||| ||||||||| Sbjct 149507 GGACACATGAGGGTCCACTCTCCATTCTTCTCAACACGCTTCATGAAGAGATCTGGGATC 149566 Query 116782 CAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAAC 116841 ||||| ||| ||||||||| || ||| |||| || | || || || || | Sbjct 149567 CAGAGAGCCAGGAAGAGATCGCGGGCACGAACTTCCTCCTTGCCATGGTTCTTTCGAAGA 149626 Query 116842 TCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC---C 116897 || | || || | | ||||| |||||| || || || || | |||| | ||| Sbjct 149627 TCAAGGAACTCAAAAACATCCGAGTGCCAAGGCTCGAGATAGATGGCGAAAGCACCAGGT 149686 Query 116898 CTTGCGACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGG 116957 || | | ||| |||| | ||| || || || || || || || || ||||| || Sbjct 149687 CTCTTGTTG-CCACCCTGATCTACGTATCTTGCAGTGTTATTGAAGACACGTAGCATGGG 149745 Query 116958 AATGATACCATCAGATTGGCCATTTGTCCCCCGAA--TACGAGACTTGTTGGCTCTGACA 117015 | || || | || ||| || || || || || ||| | | || | || Sbjct 149746 TACAATGCCGTTCGAGGTGCCGTTAGTGCCAGCAATGTATGAGCC--AGTAGCACGGATG 149803 Query 117016 TCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGA 117075 ||| |||| | ||||||||| || ||| ||| ||||| || || | |||| Sbjct 149804 CGGTGAATGTTGAGACCAATACCACCGGCCATCTTGGAGATCATGGCACAGGTCTTGAGG 149863 Query 117076 CTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATT 117135 || | ||||| || || || ||| | || | ||| ||||||||| ||| | Sbjct 149864 GTGTCATAGATACCCTCAATGCTGTCGTCTTTCATGTCGACGAGGAAGCAAGACGAGAGC 149923 Query 117136 TGTGGCCT-TGGTGTACCAGCGTTGAAGAGGGTTGG 117170 || ||||| ||||| ||||| |||||||| ||||| Sbjct 149924 TG-GGCCTGGGGTGTTCCAGCATTGAAGAGAGTTGG 149958 >seq15 Length=993015 Score = 140 bits (154), Expect = 4e-28 Identities = 345/514 (67%), Gaps = 17/514 (3%) Strand=Plus/Plus Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590 ||| |||||||||||||| || |||||||| || |||||| |||||| ||||| ||||| Sbjct 219794 GTGCAGACCCTCGTCACGCGAAATGAGTTCGTTGGAGAAGGTCAGACCGGGCATAAGACC 219853 Query 127591 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 127650 |||||||| | |||||| || | | || | || ||||||||| ||||| || Sbjct 219854 ACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGCTCCGCTGAAGAAGATACCCTCAACGGC 219913 Query 127651 CGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACT--TTGT-ATCAAACCACTTCAT 127707 ||||| |||| ||||||| ||| |||| ||||| |||| ||| ||| | || Sbjct 219914 GGCGAAGGCAATAAGACGCTGGGCGAAGG---TGGACTTCTTGTCGGCAATCCAGTGCAG 219970 Query 127708 CGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAGTTCCTT 127767 ||||| | ||||| || ||| || || | ||||| || || | ||||| | | Sbjct 219971 AGCCCAGTCGGCCTTCTTGCGGATGCAAGGAATGGTCTCAATAGCATTGAAGAGATGTGT 220030 Query 127768 CTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGAC 127827 ||| | | || || |||||||| | || ||||| || || || ||| ||||| Sbjct 220031 CTTCTGGGCAGGCTCCTTGATGTAGGTGTCAATGAGGAGAGAGTACGTCTCGGAGTGGAT 220090 Query 127828 CAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCAT 127886 | | ||| || | ||| | ||||||| | || || || ||||| |||||| Sbjct 220091 GTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCATCGGGCCTCTGGGATCTGAACCTCAC 220149 Query 127887 CGGCAAAATTGTTATTGATA---TTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACG 127943 | | ||||| | | || | || || ||||| || ||||| | || || || | Sbjct 220150 CAG-AAAATCG--CTCGACAAGGTTTTCGTTGACAATGCCGTCGGATGCGGCGAAGAAGG 220206 Query 127944 CCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCGA 128000 | || || | ||||| || || | || || | || | |||| |||| || Sbjct 220207 CGAGAATGTGGGAGATGAAGAACTTCTCGTCGTCATTTAGGCGGTTGCTCCAATCGTGGA 220266 Query 128001 GATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034 ||||||| || ||||| | |||||| |||||||| Sbjct 220267 GATCCTTGGATAGATCAATCTCCTCGGCAGTCCA 220300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613504991374080