Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20EC38_20[genbank_20GCA_5F002120335.1_202017-05-11] 288 sequences; 47,717,833 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq40 134 1e-25 seq14 100 2e-15 >seq40 Length=406905 Score = 134 bits (148), Expect = 1e-25 Identities = 663/1042 (64%), Gaps = 15/1042 (1%) Strand=Plus/Minus Query 517274 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 517333 ||||| |||||||| | ||| || ||||| ||||| ||||| || || | | || || Sbjct 182913 ATACCGTTGGCATCAAGATCGAAGGTGACCTCAATCTGAGGAACACCGCGGGGTGCGGGC 182854 Query 517334 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 517393 ||||| || | | || | || || || || || || ||| || || ||| Sbjct 182853 GGGATGCCAGTAAGCTCGAACTTACCGAGCAGGTTGTTGTCCTTGGTGCGTTGACGCTCA 182794 Query 517394 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 517453 |||||| | | ||| || || ||| || || || || |||| | || || Sbjct 182793 CCCTCGTATACTTGAATGAGCACACCAGGCTGGTTGTCGGAGAAAGTGGAGAAGACCTCC 182734 Query 517454 GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGCT 517513 || || || ||||| || ||||| | || | || ||||| |||||||| || Sbjct 182733 GACTTCTTGGTGGGAATAGTGGTGTTGCGGGGGATGAGCTTAGTCATCATACCACCAGCG 182674 Query 517514 GTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT--TTTGAAGTTTTT 517571 || || | ||| ||||| || || | |||||| | || | || | || | | || Sbjct 182673 GTCTCGATACCGAGAGACAGCGGGGCGACATCGAGAAGCAGGATCTCGTTGGTCGACTTG 182614 Query 517572 CATCAGTT-TGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCA 517630 | | | | | |||| || ||||| || || | || ||||| || || ||||| ||| Sbjct 182613 GAGCTGGTGTCACCAGAGAGGATAGCAGCCTGGACTGCGGCACCGTAGGCGACAGCCTCA 182554 Query 517631 TCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTT 517690 || || || | | || || | | ||||| ||||| | | | || || | ||| Sbjct 182553 TCGGGGTTGATGGATTTGTTGGGCTCCTTACCGTTGAAGTAGTCGGTAATGAGCT-TCTG 182495 Query 517691 ACCTTAGGA-ATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATC 517749 | || ||||| | || || || || | || || || || ||||| || || || Sbjct 182494 AATGCGGGGGATACGGGTGGAGCCACCGACAAGGACGATCTCGTGGACCTGGGACTTGTC 182435 Query 517750 CAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTGA 517809 | || | ||| || || || || || | | | | || || | || Sbjct 182434 GATCTTGGCATCTGCCAAGACACGATCGACAGGCTGGATAGTGGATCGGAAGAGATCCTG 182375 Query 517810 ACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-TCAATTCCTTCGAAC 517867 || || ||||||||| ||| | || || || | || || ||||| |||||| || Sbjct 182374 GCACAGCTCTTCGAATCGAGCACGGGT--GATGGAGGTGTAGAAGTCAATACCTTCGTAC 182317 Query 517868 AAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCA 517927 | || |||| || |||| ||| || | || ||||| || | ||| || ||||| ||| Sbjct 182316 AGGGAGTCAATCTCGATCGAAGTCTGTGCAGACGAAGAGAGGGTACGCTTGGCACGCTCA 182257 Query 517928 CATGCTGTCCTTAGTCTTCGTAAGGCTTTTGC-TGATTGATTCAAATCTGTTTTATATTT 517986 || || || | || | ||| | || || | | || | | ||| | || | || Sbjct 182256 CAGGCGGTTCGGAGACGTCGGAGAGCACGAGCATTAGTGGAT-AGATCCTTCTTGTGCTT 182198 Query 517987 TCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAA 518046 | |||||| || | || | | || || || || ||||| || ||||| ||||| Sbjct 182197 GCGCTTGAATTCGTTGACGAAGTGGTTGACGAGTCGGTTGTCAAAGTCCTCACCACCCAA 182138 Query 518047 TTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGT 518106 | ||| | || | |||| | || | ||| | || || |||| | || ||| | Sbjct 182137 GTGAGTGTCACCAGCAGTAGACTTGACCTCGAAGATACCCTCCTCAATGGTCAGAAGGGA 182078 Query 518107 TACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGG-- 518164 |||||| ||| |||||||| | ||| || || || || || | || || || Sbjct 182077 GACATCAAAGGTACCACCACCAAGATCGAAGATCAGAACGTT--TCGCTCACCCTCGGCC 182020 Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224 || ||||||||||| || || | ||||| || || || || ||||| |||| | || Sbjct 182019 TTCTTATCAAGACCGTAGGCGATGGCAGCGGCCGTAGGCTCGTTAATGATTCGGAGGACG 181960 Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284 || || |||||||| ||||| || || |||||||||| ||| || ||||| || || Sbjct 181959 TTCAGGCCAGCAATGAGACCTGCGTCCTTGGTGGCTTGTCGTTGGGAGTCGTTGAAGTAG 181900 Query 518285 GCAGGAACAGTAATAACGGCAT 518306 || || || || |||||||||| Sbjct 181899 GCCGGGACGGTGATAACGGCAT 181878 >seq14 Length=1021207 Score = 100 bits (110), Expect = 2e-15 Identities = 114/152 (75%), Gaps = 1/152 (1%) Strand=Plus/Minus Query 518168 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 518227 ||||| ||||| || || | ||| || ||||| ||||| || | ||| | || || || Sbjct 733141 TTATCCAGACCGTAGGCGATAGCCGCGGCAGTAGGTTCGTTGACAATGCGCAGCACGTTG 733082 Query 518228 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 518287 || || || || | || ||||| |||||||||||||| || ||||| ||||| ||| Sbjct 733081 AGGCCGGCGATGGTGCCAGCATCCTTAGTGGCTTGTCTCTGGTTGTCGTTGAAATAGGCA 733022 Query 518288 GGAACAGTAATAACGGCATCAGTTA-CTTCTT 518318 || ||||||| |||||| | ||| | |||||| Sbjct 733021 GGGACAGTAACAACGGCGTGAGTAACCTTCTT 732990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780808108491328