Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20EC38_20[genbank_20GCA_5F002120335.1_202017-05-11] 288 sequences; 47,717,833 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq51 260 2e-64 seq15 134 2e-26 >seq51 Length=278824 Score = 260 bits (288), Expect = 2e-64 Identities = 888/1355 (66%), Gaps = 38/1355 (3%) Strand=Plus/Minus Query 111997 CTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTC 112056 || |||| ||||||| ||||| |||||| ||||| | | ||||||||||| | || Sbjct 149678 CTTTCGCCATCTATCTCGAGCCTTGGCACTCGGATGTTTTTGAGTTCCTTGATCTTCGAA 149619 Query 112057 TCAACCAAGGTGATGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAG 112116 ||||| || | ||||| | || ||||||||||||| ||||||||||| |||| Sbjct 149618 AGAACCATGGCAAGGAGGAAGTTCGTGCCCGCGATCTCTTCCTGGCTCTCTGGATCCCAG 149559 Query 112117 ATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGAC-AAG 112175 |||||||||||||| | |||||| ||| ||| | ||| | ||| | ||||| || || Sbjct 149558 ATCTCTTCATGAAGCGTGTTGAGAAGAATGGAGAGTGGACCCTCATGTGTCCTAACGAAT 149499 Query 112176 GCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAG 112235 || || ||||| | || | || || ||||| || ||||| ||| |||||||| Sbjct 149498 GC-CCTGGTCTAGCTGACGTTTATGGCGATGAGTTCGAGGCCCTGTACGAGAAGTACGAA 149440 Query 112236 GAAGAAAGTCGGGCGACTGC--GACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTC 112292 | ||| ||| ||| | || || | | ||| | || | ||||| | || |||||| Sbjct 149439 GCAGAGGGTC--GCGGCCGCCAGAAGATTAAGGCT-CAGAAGCTGTGGTACGCCATTCTC 149383 Query 112293 AAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAG 112352 || |||| || |||||||| | || | ||||||||||| || ||| |||| ||| Sbjct 149382 GAGGCTCAGACTGAGACTGGAAATCCCTTCATGCTTTACAAGGATCACTGCAACCGCAAG 149323 Query 112353 AGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAA 112412 |||||||| |||||| | ||| || || || || || || || || ||| | || Sbjct 149322 AGTAATCAGAAGAATCTTGGTACTATTCGCAGCTCGAATCTTTGCACCGAGATCATCGAG 149263 Query 112413 TTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTAT 112472 | | | | |||||| |||||| || ||| | || || |||| | ||| | Sbjct 149262 TACTCCGCCCCTGATGAGGTGGCTGTCTGCAACTTAGCTTCCCTCGCGTTGCCCTCCTTC 149203 Query 112473 GTGGATCCAGAGACAAAG--ACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTG 112530 || || | | | || ||| || | ||| | | || | || || ||||| || | Sbjct 149202 GTTGA-CTATA-ACGAAGGCACTTATGACTTCCAGAAGTTGCATGAGGTTACCCAAGTCG 149145 Query 112531 TCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT-TGAGACTGCTCGT 112589 || | || | |||||| | |||||| |||| ||||||||| ||| || || Sbjct 149144 TCGTTCACAATTTGAACAGAATCATTGATGTCAATTATTACCCCGTCCCAGA-GGCCCGC 149086 Query 112590 AAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTC 112649 || || ||| |||||||||| ||||| || ||||| || ||||| || || |||| Sbjct 149085 AACAGCAACATGCGACACCGTCCCATTGGCCTTGGTGTTCAGGGTCTTGCTGACACATTC 149026 Query 112650 AT-TCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATT 112708 | | ||| || | ||||| || || || | || | || || || || Sbjct 149025 TTGGCATTG-CGTATGCCCTTTGAGTCGCCAGAGGCTAGACAATTGAACAAGCAGATCTT 148967 Query 112709 TGAGACAATGTATCACGCCGCTCTTGA-GGCGAGTTCGGAGTTGGCAGAGGTTGATGGTC 112767 ||||| || || || ||||| ||||| ||| |||| | || ||||||| || | Sbjct 148966 CGAGACGATCTACCATGCCGC-CTTGACTGCGTCCATGGAGATTGCTAAGGTTGAAGGCC 148908 Query 112768 CATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGG 112827 | || |||| || |||||||| | || || || | ||||||| || |||| || Sbjct 148907 CTTACTCTACCTACGAAGGTTCTCCCGTCTCGCAGGGCATCCTTCAATACGACATGT-GG 148849 Query 112828 AAGGTGAGACCA-AGCTTCACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAG 112886 || || | ||| | || | |||||| | |||||||| | ||||| | || Sbjct 148848 AATGTCACCCCATCGGATCTTTGGGACTGGACCAGCCTCAAGGAGCAAATCAAACAAAAT 148789 Query 112887 GGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTG 112946 ||| | || ||||| | ||| | || || ||||| |||||| ||| | || ||| || Sbjct 148788 GGTGTGCGCAACAGCTTGTTGGTCGCCCCTATGCCCACAGCCAGCACATCCCAGATCCTG 148729 Query 112947 GGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTA-TCTGAGAAGAACCCTCGC 113005 ||||| ||||| ||||| || || ||||| | |||||||| ||| | | |||||| Sbjct 148728 GGTAACAATGAGTGCTTCGAGCCTTACACTTCCAACATCTACTCT-CGCCGTGTCCTCGC 148670 Query 113006 GGGAGAGTTTGTGATTGTCAACAAGCATCTCGTGG----ATGACCTCAAAGAGATTGGTC 113061 || ||||| | | || || | || || | | ||||| || || |||| Sbjct 148669 TGGCGAGTTCCAGGTCGTTAA----CCCCTGGTTGCTCAAGGACCTTGTTGACATGGGTC 148614 Query 113062 TCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTG 113121 ||||||| | |||||| | | || | | ||| ||||| ||||| || || Sbjct 148613 TCTGGTCTGATAGCATGAAGAACCGTATCATTGCCGAGGGCGGTTCAATTCAGAACATCC 148554 Query 113122 TGGATATTCCAGATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAA--TCAAGATGAA 113179 | | ||||| | ||| || ||| | ||| || || ||||||| || | ||| Sbjct 148553 CGAACATTCCTGCTGATATCAAGGCTCTTTACAAGACCGTCTGGGAAATCTCCCAACGAA 148494 Query 113180 GGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAA 113239 ||| | | |||||||| || |||||| |||||||| || ||| | || Sbjct 148493 --CTGTTGTCCAGATGGCCGCTGACCGTGGTGCGTTCATTGACCAGTCCCAATCACTAAA 148436 Query 113240 TCTATTCAT--GGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGG 113297 | | ||| || || || || ||| |||| || | ||||||| | | | ||| Sbjct 148435 TATCCACATGAGGGAA--CCCACTATGGGCAAGATCACCAGTATGCACTTCACCGGCTGG 148378 Query 113298 AAGAAGGGTCTCAAAACGGGGATGTATTACCTCCG 113332 ||| || || || || || ||||| |||||||| Sbjct 148377 AAGCTTGGCCTGAAGACTGGCATGTACTACCTCCG 148343 >seq15 Length=993015 Score = 134 bits (148), Expect = 2e-26 Identities = 346/515 (67%), Gaps = 19/515 (4%) Strand=Plus/Minus Query 101817 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGACTC---TAAAT 101873 |||||||| || ||| | ||||| || |||||| | ||||||||| | | ||||| Sbjct 220300 TGGACTGCCGAGGAGATTGATCTATCCAAGGATCTCCACGATTGGAGCAACCGCCTAAAT 220241 Query 101874 GAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGGTCCGATGGAATT 101933 || | || ||| ||||| |||| || || ||||| || | ||||| || ||| Sbjct 220240 GACGACGAGAAGTTCTTCATCTCCCACATTCTCGCCTTCTTCGCCGCATCCGACGGCATT 220181 Query 101934 GTTTTTGAGAA---TATCAATAACAACTTTGCTGATGAGGTGCA-ATCCTCTGAAGCGAG 101989 || || || | || | | | ||| ||| |||||| || |||| | || || | Sbjct 220180 GTCAACGAAAACCTTGTCGAG--CGATTTT-CTGGTGAGGTTCAGATCC-CAGAGGCCCG 220125 Query 101990 ATCTTTCTATGCGTATCAATGTCATAATGAA-ATGGTGCATGGGGAGACATACAGTAAAC 102048 || ||||| | | || | |||| ||| | | | || ||||| ||| | | Sbjct 220124 ATGCTTCTACGGCT-TCCAGATCATGATGGAGAACATCCACTCCGAGACGTACTCTCTCC 220066 Query 102049 TCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAAA 102108 |||| |||| || || ||||| ||| |||||| || ||||| | || || | | Sbjct 220065 TCATTGACACCTACATCAAGGAGCCTGCCCAGAAGACACATCTCTTCAATGCTATTGAGA 220006 Query 102109 CAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAA--AGT 102165 | |||| || || | ||||| || || |||||| || | ||| ||| |||| ||| Sbjct 220005 CCATTCCTTGCATCCGCAAGAAGGCCGACTGGGCTCTGCACTGGATTGCCGACAAGAAGT 219946 Query 102166 CGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 102225 | |||| || |||| || | || || || |||||||||||||||||| | Sbjct 219945 CCA---CCTTCGCCCAGCGTCTTATTGCCTTCGCCGCCGTTGAGGGTATCTTCTTCAGCG 219889 Query 102226 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 102285 | ||||| | || | |||||||||||||| ||||| ||||| ||||| ||||| Sbjct 219888 GAGCCTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTTATGCCCGGTCTGACCTTCT 219829 Query 102286 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 ||||||| || || || ||||||||||| || ||| Sbjct 219828 CCAACGAACTCATTTCGCGTGACGAGGGTCTGCAC 219794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620740165327360