Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20EC38_20[genbank_20GCA_5F002120335.1_202017-05-11] 288 sequences; 47,717,833 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq51 163 3e-35 seq5 131 2e-25 >seq51 Length=278824 Score = 163 bits (180), Expect = 3e-35 Identities = 995/1567 (63%), Gaps = 67/1567 (4%) Strand=Plus/Plus Query 109507 GACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACACTT--TT 109564 || || ||||| || ||||| |||||| ||||| ||||| | || | || || || Sbjct 148442 GATTGGGACTGGTCAATGAACGCACCACGGTCAGCGGCCATCTGGACAA--CAGTTCGTT 148499 Query 109565 GGCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGT 109624 || ||||||||||| |||||||| | | |||||||||| | ||||||| | ||||| Sbjct 148500 GGGAGATTTCCCAGACGGTCTTGTAAAGAGCCTTGATATCAGCAGGAATGTTCGGGATGT 148559 Query 109625 TTTGAATAGAGCCACCAGCCTTCACCATGAGA---TCCTTCATCTCTTTC-GACCAGAGA 109680 | ||||| || || || || | |||| | | |||||| || || ||||||||| Sbjct 148560 TCTGAATTGAACCGCC---CTCGGCAATGATACGGTTCTTCATG-CTATCAGACCAGAGA 148615 Query 109681 CCGACCTTTTTGAGATCGT----CAACAAGATGCTTGTTGACCACGACAAATTCACCAGC 109736 || | | || || | |||| || | || || || || || ||||| Sbjct 148616 CCCATGTCAACAAGGTCCTTGAGCAACCAGGGG----TTAACGACCTGGAACTCGCCAGC 148671 Query 109737 AAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAG 109796 || || || ||||||||| | ||||| || ||||| ||||||||||| || || Sbjct 148672 GAGGACACGGCGAGAGTAGATGTTGGAAGTGTAAGGCTCGAAGCACTCATTGTTACCCAG 148731 Query 109797 GATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTT 109856 ||| || | ||| ||||||||||| || || | | | ||||| || | ||| || Sbjct 148732 GATCTGGGATGTGCTGGCTGTGGGCATAGGGGCGACCAACAAGCTGTTGCGCACACCATT 148791 Query 109857 CGTCTTTACCCGCTCACGCATTGCGTC----CCAATCATAACGACCACTAAATTTAGTCT 109912 || | |||| ||| | | ||| || || || | | | | | | Sbjct 148792 TTGTTTGATTTGCTCC----TTGAGGCTGGTCCAGTCCCAAAGATC-CGA----TGGGGT 148842 Query 109913 CACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCT 109972 || || |||||| || |||||| | |||| | | |||||||| | | | | Sbjct 148843 GAC-ATTCCACATGTCGTATTGAAGGATGCCCTGCGAGACGGGAGAACCTTCGTAGGTAG 148901 Query 109973 CGTACGACCCCTCAACCTCGGCCAACTC---GGATGAAGCCTCTAGTGCCGCATGATACA 110029 ||| | || ||||||| || | ||| ||| | || || || || ||||| || | Sbjct 148902 AGTAAGGGCCTTCAACCTTAGCAATCTCCATGGACGCAG--TCAAG-GCGGCATGGTAGA 148958 Query 110030 TAGTCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGAC-CA 110088 | ||||| || || || |||| | | || |||| | || ||||| | || || Sbjct 148959 TCGTCTCGAAGATCTGCTTGTTCAATTGTCTAGCCTCTGGCGACTCAAAGGGCATACGCA 149018 Query 110089 ---CAAAGAATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTC 110145 | |||||| || || |||||||||||||| || |||||||| || || | Sbjct 149019 ATGCCAAGAATGTG----TCAGCAAGACCCTGAACACCAAGGCCAATGGGACGGTGTCGC 149074 Query 110146 ATGTTAGAGCGTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGA 110205 ||||| | || || | ||||||||| | ||| || |||| | || | | Sbjct 149075 ATGTTGCTGTTGCGGGCCTCTGGGACGGGGTAATAATTGACATCAATGATTCTGTTCAAA 149134 Query 110206 TTCTTCGTCACAGTCTTCG-TGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTC 110264 || | || | ||| | | | ||||| | || | | | || | || | | || Sbjct 149135 TTGTGAACGAC-GACTTGGGTAACCTCATGCAACTTCTGGAAGTCATAAGTG--CCT-TC 149190 Query 110265 CTTATTGACAT---ATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTC 110321 |||| | || | ||| | || | || || | ||||| |||| ||| || Sbjct 149191 GTTATAGTCAACGAAGGAGGGCAACGCGAGGGAAGCTAAGTTGCAGACAGCCACCTCATC 149250 Query 110322 TTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTT 110381 | ||| ||| || | || || || || | || || || ||| ||| | || Sbjct 149251 AGGGGCGGAGTACTCGATGATCTCGGTGCAAAGATTCGAGCTGCGAATAGTACCAAGATT 149310 Query 110382 CTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTC 110441 ||||||||| ||| |||||| |||||| || |||||| | || | ||||| || Sbjct 149311 CTTCTGATTACTCTTGCGGTTGCAGTGATCCTTGTAAAGCATGAAGGGATTTCCAGTCTC 149370 Query 110442 CGTCTGTGACTTGAGAATGGCCTTCCATA-CATCGGCGGCGGGGACAGTTGCGTTAGCGA 110500 ||||| | || ||||||||| | ||| | | || | | | | || | || Sbjct 149371 AGTCTGAGCCTCGAGAATGGCGTACCACAGCTTCTGAGCCTTAATCTTCTG-GCGGCCGC 149429 Query 110501 GACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAA 110560 |||| || | |||||||| ||||| | |||| || || | || || || |||| | Sbjct 149430 GACCCTCTGCTTCGTACTTCTCGTACAGGGCCTCGAACTCATCGCCATAAACGTCAGCTA 149489 Query 110561 GACCCTTCGCCTT-GTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTC 110619 |||| || || || ||||| | ||||| ||| | |||| || |||||| | |||| Sbjct 149490 GACCAGG-GCATTCGTTAGGACACATGAGGGTCCACTCTCCATTCTTCTCAACACGCTTC 149548 Query 110620 ATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCA 110679 ||||| || || || ||||| | ||| ||| || || ||| |||| | || || | Sbjct 149549 ATGAAGAGATCTGGGATCCAGAGAGCCAGGAAGAGATCGCGGGCACGAACTTCCTCCTTG 149608 Query 110680 CCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAG 110739 || ||||| || || || | || || | | |||||||||||| || ||||||||| Sbjct 149609 CCATGGTTCTTTCGAAGATCAAGGAACTCAAAAACATCCGAGTGCCAAGGCTCGAGATAG 149668 Query 110740 ACAGCGATGGATCC----CTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATT 110795 | |||| | || || | | || |||| | || || | ||| ||| ||| Sbjct 149669 ATGGCGAAAGCACCAGGTCTCTTGTTG-CCACCCTGATCTACGTATCTTGCAGTGTTATT 149727 Query 110796 GAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGA 110855 |||||| | ||||| || | ||| || | || || || || || ||| || Sbjct 149728 GAAGACACGTAGCATGGGTACAATGCCGTTCGAGGTGCCGTTAGTGCCAGCAATGTATGA 149787 Query 110856 CTTATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTG 110915 | | ||||| ||| ||| || | | |||||||||||| ||| ||| || Sbjct 149788 GCCAGTAGCACGGATGCGGTGAATGTTGAGACCAATACCACCGGCCATCTTGGAGATCAT 149847 Query 110916 TGCACA-CTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTA 110974 ||||| ||| |||| || |||| ||||| ||||| || | || || | | | Sbjct 149848 GGCACAGGTCT-TGAGGGTGTCATAGATACCCTCAATGCTGTCGTCTTTCATGTCGACGA 149906 Query 110975 GAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCAT 111034 | |||||||| || | ||| | | || ||||| ||||||||||| || || | |||| Sbjct 149907 GGAAGCAAGACGAGAGCTGGGCCTGGGGTGTTCCAGCATTGAAGAGAGTTGGGGAAGCAT 149966 Query 111035 GAATGAA 111041 || |||| Sbjct 149967 GAGTGAA 149973 >seq5 Length=1588943 Score = 131 bits (144), Expect = 2e-25 Identities = 282/413 (68%), Gaps = 13/413 (3%) Strand=Plus/Plus Query 11592 GAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTG----- 11646 |||||| ||||| || ||||| | |||||||| || ||| || ||||||||| Sbjct 1512614 GAAACCATCCATCTCCGTGAGGATCTGGTTGAGGGTAGCTTCTCGTTCATCGTTGCCTCC 1512673 Query 11647 GAGGGCATACCACCTGCCGAACGCTTCTTACCGACAGCGTCAATCTCATCGATGAATACG 11706 || | || ||| ||| ||| |||||| || ||||||||||| ||||| | | Sbjct 1512674 GAATCGTTGCC-CCT-CCGCACGAGATCTACCGATGGCATCAATCTCATCAATGAAGATG 1512731 Query 11707 ATACACGGTTGGTTGGCACGTGCCTGTT-CGAAAAGTTCACGTACACGCTTCGCTCCAAC 11765 |||||||| || || || ||| |||| || || | || || ||| ||||| Sbjct 1512732 ATACACGGCGTATTTTTTCGCGC-TGTGGCGAAGAGATCCCTAACTCGGGACGCACCAAC 1512790 Query 11766 ACCTACGAACATCTCAACGAAGTTTG--CGGCAGAACACTGAATGAAGGGAACATTAGAC 11823 ||| ||||||||||||||||| | || | || | | || || ||| || || || Sbjct 1512791 ACCAACGAACATCTCAACGAATTCTGAACCGCTTA-CGCTAAA-GAATGGTACTCCTGAT 1512848 Query 11824 TCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGG 11883 || |||||| ||||| || || | ||||||||||| ||||| | |||||||||| Sbjct 1512849 TCGCCAGCGGTGGCTTTCGCAAGTAATGTCTTACCCGTTCCAGGGGGTCCAGCGAGAATC 1512908 Query 11884 GCGCCACGGGGGATCTTGGCACCACTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCC 11943 || || || || ||||| |||||| || | | || || ||||| |||||||| Sbjct 1512909 GCACCGCGAGGTATCTTCGCACCAAGTCTCTGGAACCGTTCCGGCTTTTTGAGGAAACTG 1512968 Query 11944 ACAATCTCCTCAAGTTCCTCCTTGGCGGAGTCGATACCCTCAACATCGGTGAA 11996 || | ||| || || | ||||| ||| ||||| ||||||| | ||| Sbjct 1512969 ACGAATTCCATAATCTCTTGTTTGGCTTCGTCCATACCGGCAACATCCGAGAA 1513021 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588973879686400