Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20EC38_20[genbank_20GCA_5F002120335.1_202017-05-11] 288 sequences; 47,717,833 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq51 239 5e-58 seq15 102 1e-16 >seq51 Length=278824 Score = 239 bits (264), Expect = 5e-58 Identities = 1122/1748 (64%), Gaps = 49/1748 (3%) Strand=Plus/Plus Query 105590 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGCATAGAAGAG 105649 ||||| |||||||| || ||||| || || | ||||| || | |||||| | | Sbjct 148343 CGGAGGTAGTACATGCCAGTCTTCAGGCCAAGCTTCCAGCCGGTGAAGTGCATACTGGTG 148402 Query 105650 AGCTTGGACATCGTTGGACTTTCC--ATGAAAAGATTCATACTTTGACTCTGGTCAATGA 105707 | |||| ||| || || || || ||| | ||| | ||| ||||||||||| Sbjct 148403 ATCTTGCCCATAGTGGG--TTCCCTCATGTGGATATTTAGTGATTGGGACTGGTCAATGA 148460 Query 105708 AGCGACCACGTTGTGCCGCCATATCAATGACATCCTTCATCTTGA--TTTCCCACACTGT 105765 | |||||| | || ||||| | | ||| ||| | || ||||||| || || Sbjct 148461 ACGCACCACGGTCAGCGGCCATCTGGACAACAG--TTCGTTGGGAGATTTCCCAGACGGT 148518 Query 105766 GCGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACCCCCCGC 105825 ||| ||| |||||||||| | || || | | ||| || ||||||||||| ||| | Sbjct 148519 CTTGTAAAGAGCCTTGATATCAGCAGGAATGTTCGGGATGTTCTGAATTGAACCGCCCTC 148578 Query 105826 CTTGACCATGAGA---TCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATT 105882 | | |||| | | |||||| | ||||| ||||| || | || || || Sbjct 148579 ---GGCAATGATACGGTTCTTCATGCTATCAGACCAGAGACCCATGTCAACAAGGTCCTT 148635 Query 105883 GACGAGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGA-TAGATGT 105941 || | ||| || | | ||||| || |||||| | | ||| ||||||| Sbjct 148636 GAGCAACCAGGGGTTAACGACCTGGAACTCGCCAGCGAGGACACGGCG-AGAGTAGATGT 148694 Query 105942 TCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTG 106001 | | ||||| || || ||||| ||||| ||||||| ||| || | ||| |||||| | Sbjct 148695 TGGAAGTGTAAGGCTCGAAGCACTCATTGTTACCCAGGATCTGGGATGTGCTGGCTGTGG 148754 Query 106002 GCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAA 106061 |||| || || | ||| | ||||| || | ||| |||| ||||| | |||||||| Sbjct 148755 GCATAGGGGCGACCAACAAGCTGTTGCGCACACCATTTTGTTTGATTTGCTCCTTGAGGC 148814 Query 106062 CATCCCAGTCGTAGTTGAGCT--TGGTTTCACCTTCCCACATATCAAATTGAAGCACCCC 106119 |||||| | || | ||| | || |||| |||| || ||||||| | || Sbjct 148815 TGGTCCAGTCCCAAA-GATCCGATGGGGTGACATTCC-ACATGTCGTATTGAAGGATGCC 148872 Query 106120 TTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACA 106179 || || ||||||||| || | || || | |||| | | ||| | || Sbjct 148873 CTGCGAGACGGGAGAACCTTCGTAGGTAGAGTAAGGGCCTTCAACCTTAGCAATCTCCAT 148932 Query 106180 GCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGC 106239 | ||| || || || || || || || || ||||| | |||| | | || Sbjct 148933 GGACGCAGTCAAGGCGGCATGGTAGATCGTCTCGAAGATCTGCTTGTTCAATTGTCTAGC 148992 Query 106240 TTCATCTGAATCAAATG-CGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACAC 106298 || || ||||| | | || || | | ||| || || ||||| ||||||| Sbjct 148993 CTCTGGCGACTCAAAGGGCATA-CGCAATGCCAAGAATGTGTCAGCAAGACCCTGAACAC 149051 Query 106299 CCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA-ACGGGATAAAAA 106357 | | ||||| || | ||||||||| || || || || ||| ||||| ||| || Sbjct 149052 CAAGGCCAATGGGACGGTGTCGCATGTTGCTGTTGCGGGCC-TCTGGGACGGGGTAATAA 149110 Query 106358 TTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTT 106417 || ||||||| || ||| | ||| | || | | || | ||||| | || Sbjct 149111 TTGACATCAATGATTCTGTTCAAATTGTGAACGACGACTTGGGTAACCTCATGCAACTTC 149170 Query 106418 TCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGG----GCGATTGATGC 106473 | | ||| |||||| || | || | || || ||| || |||| || || Sbjct 149171 TGGAAGTCATAAGTGCCT---TCGTTATAGTCA-ACGAAGGAGGGCAACGCGAGGGAAGC 149226 Query 106474 CAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTT 106533 || ||||| |||||| |||||| | | |||||| | || || || || | || Sbjct 149227 TAAGTTGCAGACAGCCACCTCATCAGGGGCGGAGTACTCGATGATCTCGGTGCAAAGATT 149286 Query 106534 GGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTA 106593 || || ||| || || | |||||| || |||||||| |||||| ||||||||| Sbjct 149287 CGAGCTGCGAATAGTACCAAGATTCTTCTGATTACTCTTGCGGTTGCAGTGATCCTTGTA 149346 Query 106594 GAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGG 106652 |||||| |||| | || ||||| ||||| | || |||||| || | ||||| | || | Sbjct 149347 AAGCATGAAGGGATTTCCAGTCTCAGTCTGAGCCTCGAGAATGGCGTACCACAGCTTCTG 149406 Query 106653 CGGCTGGTACAA-TGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCA 106711 | || | ||||| | | || ||||| || |||||||| ||| ||||| || Sbjct 149407 AGCCTTAATCTTCTGGCG--GCCGCGACCCTCTGCTTCGTACTTCTCGTACAGGGCCTCG 149464 Query 106712 AACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT-GTCTGGACAGAAAAGAGACCA 106770 ||||| || || |||| | ||||| || || || || ||||| | || | ||| Sbjct 149465 AACTCATCGCCATAAACGTCAGCTAGACCAGG-GCATTCGTTAGGACACATGAGGGTCCA 149523 Query 106771 TTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAG 106830 | ||| || |||||| ||||||||||| || ||||| ||||| || | ||||| Sbjct 149524 CTCTCCATTCTTCTCAACACGCTTCATGAAGAGATCTGGGATCCAGAGAGCCAGGAAGAG 149583 Query 106831 ATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGAT 106890 ||| | ||| | || || | || ||||| ||| | ||||||||||| | | Sbjct 149584 ATCGCGGGCACGAACTTCCTCCTTGCCATGGTTCTTTCGAAGATCAAGGAACTCAAAAAC 149643 Query 106891 ATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTT 106946 ||||| |||||| ||||| ||||||| |||| || || || | | | ||| | | Sbjct 149644 ATCCGAGTGCCAAGGCTCGAGATAGATGGCGAAAGCACCAGGTCTCTTGTTG-CCACCCT 149702 Query 106947 GATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATT 107006 ||| ||| || | || ||| || || || || ||||| || | ||| || | || Sbjct 149703 GATCTACGTATCTTGCAGTGTTATTGAAGACACGTAGCATGGGTACAATGCCGTTCGAGG 149762 Query 107007 GACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAA 107066 || || || || ||| || | | || | | || |||| | |||| Sbjct 149763 TGCCGTTAGTGCCAGCAATGTATGAGCCAGTAGCACGGATGCGGTGAATGTTGAGACCAA 149822 Query 107067 TACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGA 107126 |||| || ||| ||| ||||| ||||| | | || || |||||||||| | | Sbjct 149823 TACCACCGGCCATCTTGGAGATCATGGCACAGGTCTTGAGGGTGTCATAGATACCCTCAA 149882 Query 107127 TTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCT-TGGTGTACCA 107185 | ||| || || || ||| ||||||||| || | ||| || || ||||| ||| Sbjct 149883 TGCTGTCGTCTTTCATGTCGACGAGGAAGCAAGACGAGAGCTG-GGCCTGGGGTGTTCCA 149941 Query 107186 GCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATG 107243 ||||||||||| ||||| | || ||| |||| || ||| ||||| || ||| | Sbjct 149942 GCATTGAAGAGAGTTGGGGAAGCATGAGTGAA-GTA-TTTGCTAGACATGAGGTTGTAGG 149999 Query 107244 TCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGT 107303 ||| | ||| |||| || || || |||||||| ||||||||||| | ||||| Sbjct 150000 TCTGAATGACTTTCTCAACATCATCACCCCAGATGCCGACAGCCACACGCATGATCATGT 150059 Query 107304 ATTGGGGT 107311 || ||| Sbjct 150060 GCTGTGGT 150067 >seq15 Length=993015 Score = 102 bits (112), Expect = 1e-16 Identities = 143/198 (72%), Gaps = 6/198 (3%) Strand=Plus/Plus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 ||| |||||||| || || ||||| ||||| || |||||| || || ||||| ||||| Sbjct 219794 GTGCAGACCCTCGTCACGCGAAATGAGTTCGTTGGAGAAGGTCAGACCGGGCATAAGACC 219853 Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404 |||||||| | ||| | || | ||| | ||| ||||||||||||||| || Sbjct 219854 ACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGCTCCGCTGAAGAAGATACCCTCAACGGC 219913 Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACT--TTGT-GTCAAACCATTTCAT 117461 || || |||| ||| |||| |||||||| | |||| |||| | ||| ||| | || Sbjct 219914 GGCGAAGGCAATAAGACGCTGGGCGAAGGTG---GACTTCTTGTCGGCAATCCAGTGCAG 219970 Query 117462 TGCCCATTTCGCCTTCTT 117479 ||||| | |||||||| Sbjct 219971 AGCCCAGTCGGCCTTCTT 219988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589978676069120